RNA–Protein interactions for RNA: ENST00000303436.10

ARF4-201, Transcript of ADP ribosylation factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARF4, Length 1,660 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF4-201ENST00000303436 KIAA0586Q9BVV6 1533 aa21.61■■□□□ 1.05
ARF4-201ENST00000303436 CTTNBP2Q8WZ74 1663 aa21.59■■□□□ 1.05
ARF4-201ENST00000303436 LOC105371045A0A1W2PR82 267 aa21.59■■□□□ 1.05
ARF4-201ENST00000303436 CLASP1Q7Z460 1538 aa21.56■■□□□ 1.04
ARF4-201ENST00000303436 IQGAP2Q13576 1575 aa21.55■■□□□ 1.04
ARF4-201ENST00000303436 TNIKQ9UKE5 1360 aa21.52■■□□□ 1.04
ARF4-201ENST00000303436 JPH4Q96JJ6 628 aa21.5■■□□□ 1.03
ARF4-201ENST00000303436 RANGAP1P46060 587 aaPredicted RBP21.47■■□□□ 1.03
ARF4-201ENST00000303436 SHROOM2Q13796 1616 aa21.44■■□□□ 1.02
ARF4-201ENST00000303436 UGGT2Q9NYU1 1516 aa21.43■■□□□ 1.02
ARF4-201ENST00000303436 PRG4Q92954 1404 aaPredicted RBP21.42■■□□□ 1.02
ARF4-201ENST00000303436 CARMIL2Q6F5E8 1435 aa21.4■■□□□ 1.02
ARF4-201ENST00000303436 CLIP1P30622 1438 aa21.35■■□□□ 1.01
ARF4-201ENST00000303436 CEP162Q5TB80 1403 aa21.35■■□□□ 1.01
ARF4-201ENST00000303436 EFCAB5A4FU69 1503 aa21.35■■□□□ 1.01
ARF4-201ENST00000303436 DISP1Q96F81 1524 aa21.34■■□□□ 1.01
ARF4-201ENST00000303436 KIAA0556O60303 1618 aa21.33■■□□□ 1
ARF4-201ENST00000303436 P3H3Q8IVL6 736 aa21.32■■□□□ 1
ARF4-201ENST00000303436 SAMD9Q5K651 1589 aa21.32■■□□□ 1
ARF4-201ENST00000303436 ARHGEF11O15085 1522 aa21.31■■□□□ 1
ARF4-201ENST00000303436 ERCC6L2Q5T890 1561 aa21.31■■□□□ 1
ARF4-201ENST00000303436 DNAJC5Q9H3Z4 198 aa21.3■■□□□ 1
ARF4-201ENST00000303436 ARHGAP35Q9NRY4 1499 aa21.29■■□□□ 1
ARF4-201ENST00000303436 TTBK1Q5TCY1 1321 aaPredicted RBP21.26■□□□□ 0.99
ARF4-201ENST00000303436 RIMBP3CA6NJZ7 1639 aa21.26■□□□□ 0.99
ARF4-201ENST00000303436 RIMBP3BA6NNM3 1639 aa21.26■□□□□ 0.99
ARF4-201ENST00000303436 RIMBP3Q9UFD9 1639 aa21.26■□□□□ 0.99
ARF4-201ENST00000303436 FHOD3Q2V2M9 1422 aa21.25■□□□□ 0.99
ARF4-201ENST00000303436 PTPRGP23470 1445 aa21.24■□□□□ 0.99
ARF4-201ENST00000303436 ARAP1Q96P48 1450 aa21.19■□□□□ 0.98
ARF4-201ENST00000303436 FMN1Q68DA7 1419 aa21.17■□□□□ 0.98
ARF4-201ENST00000303436 CYB5RLQ6IPT4 315 aa21.14■□□□□ 0.97
ARF4-201ENST00000303436 UACAQ9BZF9 1416 aa21.09■□□□□ 0.97
ARF4-201ENST00000303436 PLB1Q6P1J6 1458 aa21.08■□□□□ 0.97
ARF4-201ENST00000303436 VPS8Q8N3P4 1428 aa21.07■□□□□ 0.96
ARF4-201ENST00000303436 ATP1B4Q9UN42 357 aaPredicted RBP21.06■□□□□ 0.96
ARF4-201ENST00000303436 ABCA8O94911 1581 aa21.06■□□□□ 0.96
ARF4-201ENST00000303436 RAPGEF6Q8TEU7 1601 aa21.05■□□□□ 0.96
ARF4-201ENST00000303436 ABCC2Q92887 1545 aa21.03■□□□□ 0.96
ARF4-201ENST00000303436 CASKIN1Q8WXD9 1431 aa21.02■□□□□ 0.96
ARF4-201ENST00000303436 UHRF1BP1LA0JNW5 1464 aa21.02■□□□□ 0.96
ARF4-201ENST00000303436 PCF11O94913 1555 aaKnown RBP21.01■□□□□ 0.95
ARF4-201ENST00000303436 FYCO1Q9BQS8 1478 aa21.01■□□□□ 0.95
ARF4-201ENST00000303436 HECW1Q76N89 1606 aa21■□□□□ 0.95
ARF4-201ENST00000303436 ADCY10Q96PN6 1610 aa20.99■□□□□ 0.95
ARF4-201ENST00000303436 NPM1P06748 294 aaKnown RBP eCLIP20.98■□□□□ 0.95
ARF4-201ENST00000303436 NUP153P49790 1475 aaKnown RBP20.96■□□□□ 0.95
ARF4-201ENST00000303436 ARID3CA6NKF2 412 aa20.96■□□□□ 0.95
ARF4-201ENST00000303436 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.94■□□□□ 0.94
ARF4-201ENST00000303436 HNRNPUL2Q1KMD3 747 aaKnown RBP20.94■□□□□ 0.94
ARF4-201ENST00000303436 KDM5BQ9UGL1 1544 aa20.92■□□□□ 0.94
ARF4-201ENST00000303436 APLP2Q06481 763 aa20.92■□□□□ 0.94
ARF4-201ENST00000303436 EPRSP07814 1512 aaKnown RBP20.91■□□□□ 0.94
ARF4-201ENST00000303436 CCDC18Q5T9S5 1454 aa20.91■□□□□ 0.94
ARF4-201ENST00000303436 ATP10BO94823 1461 aa20.9■□□□□ 0.94
ARF4-201ENST00000303436 ZCCHC11Q5TAX3 1644 aaKnown RBP20.89■□□□□ 0.93
ARF4-201ENST00000303436 CDK13Q14004 1512 aaKnown RBP20.87■□□□□ 0.93
ARF4-201ENST00000303436 CDK11AQ9UQ88 783 aaPredicted RBP20.86■□□□□ 0.93
ARF4-201ENST00000303436 LRRIQ1Q96JM4 1722 aa20.86■□□□□ 0.93
ARF4-201ENST00000303436 PLEKHD1A6NEE1 506 aa20.83■□□□□ 0.92
ARF4-201ENST00000303436 MAP3K1Q13233 1512 aa20.8■□□□□ 0.92
ARF4-201ENST00000303436 TIAM1Q13009 1591 aa20.8■□□□□ 0.92
ARF4-201ENST00000303436 CFAP43Q8NDM7 1665 aa20.8■□□□□ 0.92
ARF4-201ENST00000303436 ASXL2Q76L83 1435 aa20.79■□□□□ 0.92
ARF4-201ENST00000303436 MAPKBP1O60336 1514 aa20.79■□□□□ 0.92
ARF4-201ENST00000303436 MTUS2Q5JR59 1369 aa20.77■□□□□ 0.91
ARF4-201ENST00000303436 WDR7Q9Y4E6 1490 aa20.76■□□□□ 0.91
ARF4-201ENST00000303436 TROQ12816 1431 aaPredicted RBP20.73■□□□□ 0.91
ARF4-201ENST00000303436 KCNH8Q96L42 1107 aa20.73■□□□□ 0.91
ARF4-201ENST00000303436 LRRC9Q6ZRR7 1453 aa20.71■□□□□ 0.91
ARF4-201ENST00000303436 EHBP1L1Q8N3D4 1523 aa20.71■□□□□ 0.91
ARF4-201ENST00000303436 KANK4Q5T7N3 995 aaPredicted RBP20.7■□□□□ 0.9
ARF4-201ENST00000303436 MAGI3Q5TCQ9 1506 aa20.7■□□□□ 0.9
ARF4-201ENST00000303436 KIF14Q15058 1648 aa20.66■□□□□ 0.9
ARF4-201ENST00000303436 ABCC10Q5T3U5 1492 aa20.64■□□□□ 0.89
ARF4-201ENST00000303436 PPARGC1BQ86YN6 1023 aaKnown RBP20.64■□□□□ 0.89
ARF4-201ENST00000303436 SUPT6HQ7KZ85 1726 aaKnown RBP20.63■□□□□ 0.89
ARF4-201ENST00000303436 FAM69CQ0P6D2 419 aa20.62■□□□□ 0.89
ARF4-201ENST00000303436 DIP2BQ9P265 1576 aa20.61■□□□□ 0.89
ARF4-201ENST00000303436 TRHP20396 242 aaPredicted RBP20.59■□□□□ 0.89
ARF4-201ENST00000303436 NCOA2Q15596 1464 aa20.58■□□□□ 0.89
ARF4-201ENST00000303436 GLI2P10070 1586 aa20.58■□□□□ 0.89
ARF4-201ENST00000303436 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.58■□□□□ 0.88
ARF4-201ENST00000303436 ABCA9Q8IUA7 1624 aa20.57■□□□□ 0.88
ARF4-201ENST00000303436 CCNB3Q8WWL7 1395 aa20.55■□□□□ 0.88
ARF4-201ENST00000303436 TTC37Q6PGP7 1564 aa20.55■□□□□ 0.88
ARF4-201ENST00000303436 KIF13AQ9H1H9 1805 aa20.54■□□□□ 0.88
ARF4-201ENST00000303436 CD109Q6YHK3 1445 aa20.53■□□□□ 0.88
ARF4-201ENST00000303436 MAP3K4Q9Y6R4 1608 aa20.5■□□□□ 0.87
ARF4-201ENST00000303436 MYO5CQ9NQX4 1742 aa20.5■□□□□ 0.87
ARF4-201ENST00000303436 GPATCH8Q9UKJ3 1502 aaKnown RBP20.49■□□□□ 0.87
ARF4-201ENST00000303436 ITSN2Q9NZM3 1697 aa20.48■□□□□ 0.87
ARF4-201ENST00000303436 PLCH2O75038 1416 aa20.48■□□□□ 0.87
ARF4-201ENST00000303436 PHLDB1Q86UU1 1377 aa20.48■□□□□ 0.87
ARF4-201ENST00000303436 CFDP1Q9UEE9 299 aaPredicted RBP20.47■□□□□ 0.87
ARF4-201ENST00000303436 CDC42BPAQ5VT25 1732 aa20.47■□□□□ 0.87
ARF4-201ENST00000303436 MYOM3Q5VTT5 1437 aa20.47■□□□□ 0.87
ARF4-201ENST00000303436 PREX2Q70Z35 1606 aa20.46■□□□□ 0.87
ARF4-201ENST00000303436 TSPOAP1O95153 1857 aa20.46■□□□□ 0.87
ARF4-201ENST00000303436 ARHGAP5Q13017 1502 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms