RNA–Protein interactions for RNA: ENST00000303436.10

ARF4-201, Transcript of ADP ribosylation factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARF4, Length 1,660 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF4-201ENST00000303436 NISCHQ9Y2I1 1504 aa31.34■■■□□ 2.61
ARF4-201ENST00000303436 CCDC180Q9P1Z9 1646 aa27.65■■■□□ 2.02
ARF4-201ENST00000303436 ABCC9O60706 1549 aa26.65■■□□□ 1.86
ARF4-201ENST00000303436 ZCCHC6Q5VYS8 1495 aaKnown RBP26.19■■□□□ 1.78
ARF4-201ENST00000303436 DCAF8L2P0C7V8 631 aa26.1■■□□□ 1.77
ARF4-201ENST00000303436 DCAF1Q9Y4B6 1507 aa25.94■■□□□ 1.74
ARF4-201ENST00000303436 NACADO15069 1562 aa25.91■■□□□ 1.74
ARF4-201ENST00000303436 MYO15BQ96JP2 1530 aa25.88■■□□□ 1.73
ARF4-201ENST00000303436 RB1CC1Q8TDY2 1594 aa25.84■■□□□ 1.73
ARF4-201ENST00000303436 SCRIBQ14160 1630 aa25.29■■□□□ 1.64
ARF4-201ENST00000303436 UNC13AQ9UPW8 1703 aa25.21■■□□□ 1.63
ARF4-201ENST00000303436 SHROOM4Q9ULL8 1493 aa25.08■■□□□ 1.61
ARF4-201ENST00000303436 PABPN1Q86U42 306 aaKnown RBP eCLIP25■■□□□ 1.59
ARF4-201ENST00000303436 BICRAQ9NZM4 1560 aa24.98■■□□□ 1.59
ARF4-201ENST00000303436 CECR2Q9BXF3 1484 aa24.35■■□□□ 1.49
ARF4-201ENST00000303436 EIF4G1Q04637 1599 aaKnown RBP24.32■■□□□ 1.48
ARF4-201ENST00000303436 BAZ1AQ9NRL2 1556 aaPredicted RBP24.28■■□□□ 1.48
ARF4-201ENST00000303436 SMARCA4P51532 1647 aa24.22■■□□□ 1.47
ARF4-201ENST00000303436 MROH2BQ7Z745 1585 aa24.15■■□□□ 1.46
ARF4-201ENST00000303436 CC2D2AQ9P2K1 1620 aa24.1■■□□□ 1.45
ARF4-201ENST00000303436 RSF1Q96T23 1441 aaPredicted RBP24.05■■□□□ 1.44
ARF4-201ENST00000303436 DNAJC5BQ9UF47 199 aa24■■□□□ 1.43
ARF4-201ENST00000303436 SMARCA2P51531 1590 aa23.99■■□□□ 1.43
ARF4-201ENST00000303436 ATAD2BQ9ULI0 1458 aa23.97■■□□□ 1.43
ARF4-201ENST00000303436 PEG3Q9GZU2 1588 aa23.95■■□□□ 1.42
ARF4-201ENST00000303436 WIZO95785 1651 aa23.92■■□□□ 1.42
ARF4-201ENST00000303436 NCAPD3P42695 1498 aa23.88■■□□□ 1.41
ARF4-201ENST00000303436 SUPT5HO00267 1087 aaKnown RBP23.86■■□□□ 1.41
ARF4-201ENST00000303436 BAZ1BQ9UIG0 1483 aaKnown RBP23.83■■□□□ 1.41
ARF4-201ENST00000303436 HMGXB3Q12766 1538 aa23.81■■□□□ 1.4
ARF4-201ENST00000303436 TOP2AP11388 1531 aaKnown RBP23.71■■□□□ 1.39
ARF4-201ENST00000303436 CCDC88BA6NC98 1476 aa23.42■■□□□ 1.34
ARF4-201ENST00000303436 CADPSQ9ULU8 1353 aa23.24■■□□□ 1.31
ARF4-201ENST00000303436 LAMC3Q9Y6N6 1575 aa23.2■■□□□ 1.3
ARF4-201ENST00000303436 CFTRP13569 1480 aa23.17■■□□□ 1.3
ARF4-201ENST00000303436 NESP48681 1621 aa23.17■■□□□ 1.3
ARF4-201ENST00000303436 PDS5BQ9NTI5 1447 aa23.05■■□□□ 1.28
ARF4-201ENST00000303436 PRDM2Q13029 1718 aa23.04■■□□□ 1.28
ARF4-201ENST00000303436 ERCC6Q03468 1493 aa22.98■■□□□ 1.27
ARF4-201ENST00000303436 FANCD2Q9BXW9 1451 aa22.97■■□□□ 1.27
ARF4-201ENST00000303436 CEP164Q9UPV0 1460 aa22.91■■□□□ 1.26
ARF4-201ENST00000303436 KIF21AQ7Z4S6 1674 aa22.91■■□□□ 1.26
ARF4-201ENST00000303436 MRC2Q9UBG0 1479 aa22.77■■□□□ 1.24
ARF4-201ENST00000303436 ABCC8Q09428 1581 aa22.71■■□□□ 1.23
ARF4-201ENST00000303436 THOC2Q8NI27 1593 aaKnown RBP22.7■■□□□ 1.22
ARF4-201ENST00000303436 WRNQ14191 1432 aaPredicted RBP eCLIP22.69■■□□□ 1.22
ARF4-201ENST00000303436 URB2Q14146 1524 aaKnown RBP22.69■■□□□ 1.22
ARF4-201ENST00000303436 DNMBPQ6XZF7 1577 aa22.66■■□□□ 1.22
ARF4-201ENST00000303436 WDR62O43379 1518 aa22.66■■□□□ 1.22
ARF4-201ENST00000303436 TOPBP1Q92547 1522 aa22.64■■□□□ 1.22
ARF4-201ENST00000303436 CUX1P39880 1505 aa22.63■■□□□ 1.21
ARF4-201ENST00000303436 SYNJ1O43426 1573 aa22.58■■□□□ 1.2
ARF4-201ENST00000303436 TOP2BQ02880 1626 aa22.57■■□□□ 1.2
ARF4-201ENST00000303436 BIVM-ERCC5R4GMW8 1640 aa22.55■■□□□ 1.2
ARF4-201ENST00000303436 TRIM41Q8WV44 630 aa22.52■■□□□ 1.2
ARF4-201ENST00000303436 CUX2O14529 1486 aa22.52■■□□□ 1.2
ARF4-201ENST00000303436 FGD5Q6ZNL6 1462 aa22.5■■□□□ 1.19
ARF4-201ENST00000303436 CHIC1Q5VXU3 224 aa22.5■■□□□ 1.19
ARF4-201ENST00000303436 POLA1P09884 1462 aaPredicted RBP22.48■■□□□ 1.19
ARF4-201ENST00000303436 SOGA1O94964 1423 aa22.43■■□□□ 1.18
ARF4-201ENST00000303436 IFT140Q96RY7 1462 aa22.4■■□□□ 1.18
ARF4-201ENST00000303436 RAD54L2Q9Y4B4 1467 aa22.38■■□□□ 1.17
ARF4-201ENST00000303436 TARBP1Q13395 1621 aaKnown RBP22.34■■□□□ 1.17
ARF4-201ENST00000303436 ABCA10Q8WWZ4 1543 aa22.3■■□□□ 1.16
ARF4-201ENST00000303436 WDR97A6NE52 1622 aa22.25■■□□□ 1.15
ARF4-201ENST00000303436 TDRD9Q8NDG6 1382 aaKnown RBP22.24■■□□□ 1.15
ARF4-201ENST00000303436 ZNF608Q9ULD9 1512 aaPredicted RBP22.24■■□□□ 1.15
ARF4-201ENST00000303436 KIF27Q86VH2 1401 aa22.2■■□□□ 1.14
ARF4-201ENST00000303436 AQRO60306 1485 aaKnown RBP eCLIP22.19■■□□□ 1.14
ARF4-201ENST00000303436 EIF4G3O43432 1585 aaKnown RBP22.18■■□□□ 1.14
ARF4-201ENST00000303436 GAPVD1Q14C86 1478 aa22.17■■□□□ 1.14
ARF4-201ENST00000303436 ABCA5Q8WWZ7 1642 aa22.15■■□□□ 1.14
ARF4-201ENST00000303436 GRIN2BQ13224 1484 aa22.1■■□□□ 1.13
ARF4-201ENST00000303436 RUSC2Q8N2Y8 1516 aa22.08■■□□□ 1.13
ARF4-201ENST00000303436 EEA1Q15075 1411 aa22.08■■□□□ 1.13
ARF4-201ENST00000303436 PBRM1Q86U86 1689 aa22.07■■□□□ 1.12
ARF4-201ENST00000303436 ERICH3Q5RHP9 1530 aa22.05■■□□□ 1.12
ARF4-201ENST00000303436 FAM9AQ8IZU1 332 aaPredicted RBP22.04■■□□□ 1.12
ARF4-201ENST00000303436 IGF1RP08069 1367 aa22.02■■□□□ 1.11
ARF4-201ENST00000303436 SNAPC4Q5SXM2 1469 aa22■■□□□ 1.11
ARF4-201ENST00000303436 CSRNP3Q8WYN3 585 aa21.99■■□□□ 1.11
ARF4-201ENST00000303436 MAGI1Q96QZ7 1491 aaPredicted RBP21.99■■□□□ 1.11
ARF4-201ENST00000303436 CUL7Q14999 1698 aa21.95■■□□□ 1.1
ARF4-201ENST00000303436 FHAD1B1AJZ9 1412 aa21.93■■□□□ 1.1
ARF4-201ENST00000303436 CARMIL1Q5VZK9 1371 aa21.92■■□□□ 1.1
ARF4-201ENST00000303436 ADAMTS12P58397 1594 aa21.92■■□□□ 1.1
ARF4-201ENST00000303436 FBLN2P98095 1184 aa21.91■■□□□ 1.1
ARF4-201ENST00000303436 CHMP7Q8WUX9 453 aaPredicted RBP21.91■■□□□ 1.1
ARF4-201ENST00000303436 SYNJ2O15056 1496 aa21.9■■□□□ 1.1
ARF4-201ENST00000303436 PRXQ9BXM0 1461 aa21.85■■□□□ 1.09
ARF4-201ENST00000303436 RAPGEF2Q9Y4G8 1499 aa21.84■■□□□ 1.09
ARF4-201ENST00000303436 CHD1O14646 1710 aa21.81■■□□□ 1.08
ARF4-201ENST00000303436 GRIN2AQ12879 1464 aa21.81■■□□□ 1.08
ARF4-201ENST00000303436 KIF21BO75037 1637 aa21.78■■□□□ 1.08
ARF4-201ENST00000303436 EHMT2Q96KQ7 1210 aa21.73■■□□□ 1.07
ARF4-201ENST00000303436 GOLGA3Q08378 1498 aa21.72■■□□□ 1.07
ARF4-201ENST00000303436 OSCARQ8IYS5 282 aa21.72■■□□□ 1.07
ARF4-201ENST00000303436 UBTFP17480 764 aaKnown RBP21.68■■□□□ 1.06
ARF4-201ENST00000303436 NUP160Q12769 1436 aa21.68■■□□□ 1.06
ARF4-201ENST00000303436 CEP170Q5SW79 1584 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms