RNA–Protein interactions for RNA: ENST00000302538.9

ABR-202, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABR, Length 5,289 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-202ENST00000302538 NPM2Q86SE8 214 aaKnown RBP17.81■□□□□ 0.44
ABR-202ENST00000302538 CLIP1P30622 1438 aa17.81■□□□□ 0.44
ABR-202ENST00000302538 KDM2AQ9Y2K7 1162 aa17.8■□□□□ 0.44
ABR-202ENST00000302538 GOLGA3Q08378 1498 aa17.78■□□□□ 0.44
ABR-202ENST00000302538 ATAD2BQ9ULI0 1458 aa17.77■□□□□ 0.44
ABR-202ENST00000302538 CADPSQ9ULU8 1353 aa17.73■□□□□ 0.43
ABR-202ENST00000302538 TOP2AP11388 1531 aaKnown RBP17.72■□□□□ 0.43
ABR-202ENST00000302538 CUX2O14529 1486 aa17.7■□□□□ 0.42
ABR-202ENST00000302538 CEP164Q9UPV0 1460 aa17.7■□□□□ 0.42
ABR-202ENST00000302538 WIZO95785 1651 aa17.69■□□□□ 0.42
ABR-202ENST00000302538 SMARCA4P51532 1647 aa17.68■□□□□ 0.42
ABR-202ENST00000302538 CARMIL1Q5VZK9 1371 aa17.65■□□□□ 0.42
ABR-202ENST00000302538 SALL2Q9Y467 1007 aaPredicted RBP17.63■□□□□ 0.41
ABR-202ENST00000302538 RRP7BPQ9NSQ0 103 aa17.63■□□□□ 0.41
ABR-202ENST00000302538 CEP162Q5TB80 1403 aa17.63■□□□□ 0.41
ABR-202ENST00000302538 SOGA1O94964 1423 aa17.62■□□□□ 0.41
ABR-202ENST00000302538 TNIKQ9UKE5 1360 aa17.62■□□□□ 0.41
ABR-202ENST00000302538 LMOD2Q6P5Q4 547 aa17.61■□□□□ 0.41
ABR-202ENST00000302538 WDR43Q15061 677 aaKnown RBP eCLIP17.6■□□□□ 0.41
ABR-202ENST00000302538 TMC1Q8TDI8 760 aa17.59■□□□□ 0.41
ABR-202ENST00000302538 CFDP1Q9UEE9 299 aaPredicted RBP17.59■□□□□ 0.41
ABR-202ENST00000302538 RGL3Q3MIN7 710 aa17.57■□□□□ 0.4
ABR-202ENST00000302538 TDRD9Q8NDG6 1382 aaKnown RBP17.56■□□□□ 0.4
ABR-202ENST00000302538 MLECQ14165 292 aa17.56■□□□□ 0.4
ABR-202ENST00000302538 FAM9BQ8IZU0 186 aa17.56■□□□□ 0.4
ABR-202ENST00000302538 ARXQ96QS3 562 aa17.56■□□□□ 0.4
ABR-202ENST00000302538 ABCC8Q09428 1581 aa17.53■□□□□ 0.4
ABR-202ENST00000302538 DDX10Q13206 875 aaKnown RBP17.5■□□□□ 0.39
ABR-202ENST00000302538 EIF4G1Q04637 1599 aaKnown RBP17.49■□□□□ 0.39
ABR-202ENST00000302538 HSP90AA1P07900 732 aaKnown RBP17.49■□□□□ 0.39
ABR-202ENST00000302538 ACIN1Q9UKV3 1341 aaKnown RBP17.49■□□□□ 0.39
ABR-202ENST00000302538 NCAPD3P42695 1498 aa17.47■□□□□ 0.39
ABR-202ENST00000302538 HNRNPUQ00839 825 aaKnown RBP eCLIP17.46■□□□□ 0.39
ABR-202ENST00000302538 POGKQ9P215 609 aa17.46■□□□□ 0.39
ABR-202ENST00000302538 FANCD2Q9BXW9 1451 aa17.46■□□□□ 0.39
ABR-202ENST00000302538 PPM1GO15355 546 aaPredicted RBP17.45■□□□□ 0.38
ABR-202ENST00000302538 FHAD1B1AJZ9 1412 aa17.43■□□□□ 0.38
ABR-202ENST00000302538 NPHP1O15259 732 aa17.42■□□□□ 0.38
ABR-202ENST00000302538 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.42■□□□□ 0.38
ABR-202ENST00000302538 UPF2Q9HAU5 1272 aaKnown RBP17.41■□□□□ 0.38
ABR-202ENST00000302538 CARMIL2Q6F5E8 1435 aa17.41■□□□□ 0.38
ABR-202ENST00000302538 MYH16Q9H6N6 1097 aa17.4■□□□□ 0.38
ABR-202ENST00000302538 HDGFP51858 240 aaKnown RBP17.38■□□□□ 0.37
ABR-202ENST00000302538 ANP32AP39687 249 aaKnown RBP17.37■□□□□ 0.37
ABR-202ENST00000302538 CFAP53Q96M91 514 aa17.36■□□□□ 0.37
ABR-202ENST00000302538 MRS2Q9HD23 443 aa17.36■□□□□ 0.37
ABR-202ENST00000302538 EIF4G2P78344 907 aaKnown RBP eCLIP17.35■□□□□ 0.37
ABR-202ENST00000302538 GTF3C3Q9Y5Q9 886 aa17.35■□□□□ 0.37
ABR-202ENST00000302538 CDCA8Q53HL2 280 aa17.34■□□□□ 0.37
ABR-202ENST00000302538 HIRIP3Q9BW71 556 aaPredicted RBP17.32■□□□□ 0.36
ABR-202ENST00000302538 CCNB3Q8WWL7 1395 aa17.3■□□□□ 0.36
ABR-202ENST00000302538 KNSTRNQ9Y448 316 aa17.29■□□□□ 0.36
ABR-202ENST00000302538 GGT6Q6P531 493 aa17.29■□□□□ 0.36
ABR-202ENST00000302538 KANK1Q14678 1352 aa17.29■□□□□ 0.36
ABR-202ENST00000302538 RAPGEF2Q9Y4G8 1499 aa17.27■□□□□ 0.36
ABR-202ENST00000302538 CARD11Q9BXL7 1154 aa17.26■□□□□ 0.35
ABR-202ENST00000302538 JPH4Q96JJ6 628 aa17.24■□□□□ 0.35
ABR-202ENST00000302538 SOX12O15370 315 aa17.23■□□□□ 0.35
ABR-202ENST00000302538 ANP32BQ92688 251 aaKnown RBP17.22■□□□□ 0.35
ABR-202ENST00000302538 FMN1Q68DA7 1419 aa17.22■□□□□ 0.35
ABR-202ENST00000302538 FKBP8Q14318 412 aa17.22■□□□□ 0.35
ABR-202ENST00000302538 CC2D2AQ9P2K1 1620 aa17.22■□□□□ 0.35
ABR-202ENST00000302538 LAS1LQ9Y4W2 734 aaKnown RBP17.21■□□□□ 0.35
ABR-202ENST00000302538 MAPK8IP3Q9UPT6 1336 aa17.21■□□□□ 0.35
ABR-202ENST00000302538 NUDCQ9Y266 331 aa17.2■□□□□ 0.34
ABR-202ENST00000302538 VPS8Q8N3P4 1428 aa17.2■□□□□ 0.34
ABR-202ENST00000302538 CCDC136Q96JN2 1154 aa17.2■□□□□ 0.34
ABR-202ENST00000302538 TNNT2P45379 298 aaPredicted RBP17.19■□□□□ 0.34
ABR-202ENST00000302538 FGD5Q6ZNL6 1462 aa17.18■□□□□ 0.34
ABR-202ENST00000302538 CDK11BP21127 795 aaKnown RBP17.17■□□□□ 0.34
ABR-202ENST00000302538 NEUROD2Q15784 382 aa17.17■□□□□ 0.34
ABR-202ENST00000302538 SAFB2Q14151 953 aaKnown RBP eCLIP17.17■□□□□ 0.34
ABR-202ENST00000302538 SRPK2P78362 688 aaKnown RBP17.16■□□□□ 0.34
ABR-202ENST00000302538 AEBP2Q6ZN18 517 aaPredicted RBP17.16■□□□□ 0.34
ABR-202ENST00000302538 OSCARQ8IYS5 282 aa17.16■□□□□ 0.34
ABR-202ENST00000302538 HMGXB3Q12766 1538 aa17.13■□□□□ 0.33
ABR-202ENST00000302538 GAPVD1Q14C86 1478 aa17.13■□□□□ 0.33
ABR-202ENST00000302538 CCDC9Q9Y3X0 531 aaKnown RBP17.13■□□□□ 0.33
ABR-202ENST00000302538 STK26Q9P289 416 aa17.12■□□□□ 0.33
ABR-202ENST00000302538 CFTRP13569 1480 aa17.12■□□□□ 0.33
ABR-202ENST00000302538 U2SURPO15042 1029 aaKnown RBP17.12■□□□□ 0.33
ABR-202ENST00000302538 EFCAB2Q5VUJ9 269 aa17.12■□□□□ 0.33
ABR-202ENST00000302538 BICRAQ9NZM4 1560 aa17.11■□□□□ 0.33
ABR-202ENST00000302538 RAD54L2Q9Y4B4 1467 aa17.11■□□□□ 0.33
ABR-202ENST00000302538 PAK3O75914 559 aaPredicted RBP17.11■□□□□ 0.33
ABR-202ENST00000302538 CSB-PGBD3P0DP91 1061 aa17.09■□□□□ 0.33
ABR-202ENST00000302538 FHOD3Q2V2M9 1422 aa17.09■□□□□ 0.33
ABR-202ENST00000302538 DCAF11Q8TEB1 546 aa17.09■□□□□ 0.33
ABR-202ENST00000302538 SENP3-EIF4A1A0A087X0R7 540 aa17.08■□□□□ 0.33
ABR-202ENST00000302538 GOLGA2Q08379 1002 aa17.08■□□□□ 0.33
ABR-202ENST00000302538 NESP48681 1621 aa17.07■□□□□ 0.32
ABR-202ENST00000302538 ARHGAP35Q9NRY4 1499 aa17.07■□□□□ 0.32
ABR-202ENST00000302538 IGF1RP08069 1367 aa17.07■□□□□ 0.32
ABR-202ENST00000302538 RUSC2Q8N2Y8 1516 aa17.07■□□□□ 0.32
ABR-202ENST00000302538 KANK4Q5T7N3 995 aaPredicted RBP17.06■□□□□ 0.32
ABR-202ENST00000302538 FTSJ3Q8IY81 847 aaKnown RBP17.06■□□□□ 0.32
ABR-202ENST00000302538 TULP1O00294 542 aaPredicted RBP17.06■□□□□ 0.32
ABR-202ENST00000302538 CYB5RLQ6IPT4 315 aa17.05■□□□□ 0.32
ABR-202ENST00000302538 PTPRGP23470 1445 aa17.04■□□□□ 0.32
ABR-202ENST00000302538 EID1Q9Y6B2 187 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms