RNA–Protein interactions for RNA: ENST00000302538.9

ABR-202, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABR, Length 5,289 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-202ENST00000302538 DCAF8L2P0C7V8 631 aa23.54■■□□□ 1.36
ABR-202ENST00000302538 NISCHQ9Y2I1 1504 aa23.3■■□□□ 1.32
ABR-202ENST00000302538 SUPT5HO00267 1087 aaKnown RBP21.67■■□□□ 1.06
ABR-202ENST00000302538 SHROOM4Q9ULL8 1493 aa21.36■■□□□ 1.01
ABR-202ENST00000302538 EHMT2Q96KQ7 1210 aa21.18■□□□□ 0.98
ABR-202ENST00000302538 FAM9AQ8IZU1 332 aaPredicted RBP20.97■□□□□ 0.95
ABR-202ENST00000302538 APLP2Q06481 763 aa20.83■□□□□ 0.92
ABR-202ENST00000302538 RANGAP1P46060 587 aaPredicted RBP20.45■□□□□ 0.86
ABR-202ENST00000302538 ATP1B4Q9UN42 357 aaPredicted RBP20.38■□□□□ 0.85
ABR-202ENST00000302538 TTBK1Q5TCY1 1321 aaPredicted RBP20.36■□□□□ 0.85
ABR-202ENST00000302538 ABCC9O60706 1549 aa20.17■□□□□ 0.82
ABR-202ENST00000302538 TRIM41Q8WV44 630 aa20.07■□□□□ 0.8
ABR-202ENST00000302538 UBTFP17480 764 aaKnown RBP20.01■□□□□ 0.79
ABR-202ENST00000302538 PELP1Q8IZL8 1130 aaKnown RBP19.98■□□□□ 0.79
ABR-202ENST00000302538 MYT1LQ9UL68 1186 aa19.91■□□□□ 0.78
ABR-202ENST00000302538 PCGF6Q9BYE7 350 aa19.82■□□□□ 0.76
ABR-202ENST00000302538 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.8■□□□□ 0.76
ABR-202ENST00000302538 HNRNPUL2Q1KMD3 747 aaKnown RBP19.8■□□□□ 0.76
ABR-202ENST00000302538 PABPN1Q86U42 306 aaKnown RBP eCLIP19.74■□□□□ 0.75
ABR-202ENST00000302538 CCER1Q8TC90 406 aaPredicted RBP19.58■□□□□ 0.73
ABR-202ENST00000302538 CCDC180Q9P1Z9 1646 aa19.55■□□□□ 0.72
ABR-202ENST00000302538 CHIC1Q5VXU3 224 aa19.49■□□□□ 0.71
ABR-202ENST00000302538 ITGAEP38570 1179 aa19.37■□□□□ 0.69
ABR-202ENST00000302538 PPARGC1BQ86YN6 1023 aaKnown RBP19.37■□□□□ 0.69
ABR-202ENST00000302538 ZCCHC6Q5VYS8 1495 aaKnown RBP19.29■□□□□ 0.68
ABR-202ENST00000302538 POLR3GLQ9BT43 218 aa19.27■□□□□ 0.68
ABR-202ENST00000302538 ZEB1P37275 1124 aaPredicted RBP19.26■□□□□ 0.67
ABR-202ENST00000302538 FBLN2P98095 1184 aa19.2■□□□□ 0.66
ABR-202ENST00000302538 ERICH6Q7L0X2 663 aa19.17■□□□□ 0.66
ABR-202ENST00000302538 CENPBP07199 599 aaPredicted RBP19.16■□□□□ 0.66
ABR-202ENST00000302538 SLC4A1APQ9BWU0 796 aaKnown RBP19.15■□□□□ 0.66
ABR-202ENST00000302538 SCRIBQ14160 1630 aa19.14■□□□□ 0.65
ABR-202ENST00000302538 NEFLP07196 543 aa19.09■□□□□ 0.65
ABR-202ENST00000302538 RB1CC1Q8TDY2 1594 aa19.03■□□□□ 0.64
ABR-202ENST00000302538 CNGB1Q14028 1251 aaPredicted RBP19.02■□□□□ 0.64
ABR-202ENST00000302538 YTHDC1Q96MU7 727 aaKnown RBP18.99■□□□□ 0.63
ABR-202ENST00000302538 NACADO15069 1562 aa18.9■□□□□ 0.62
ABR-202ENST00000302538 FAM50AQ14320 339 aaKnown RBP18.89■□□□□ 0.61
ABR-202ENST00000302538 TRIM52Q96A61 297 aa18.85■□□□□ 0.61
ABR-202ENST00000302538 LOC105371045A0A1W2PR82 267 aa18.82■□□□□ 0.6
ABR-202ENST00000302538 BCANQ96GW7 911 aa18.81■□□□□ 0.6
ABR-202ENST00000302538 TRIM26Q12899 539 aaPredicted RBP18.78■□□□□ 0.6
ABR-202ENST00000302538 ARID3CA6NKF2 412 aa18.72■□□□□ 0.59
ABR-202ENST00000302538 ESF1Q9H501 851 aaKnown RBP18.68■□□□□ 0.58
ABR-202ENST00000302538 DCAF1Q9Y4B6 1507 aa18.65■□□□□ 0.58
ABR-202ENST00000302538 MYT1Q01538 1121 aa18.65■□□□□ 0.58
ABR-202ENST00000302538 DAXXQ9UER7 740 aaPredicted RBP18.65■□□□□ 0.58
ABR-202ENST00000302538 PLPPR3Q6T4P5 718 aa18.64■□□□□ 0.57
ABR-202ENST00000302538 ZNF326Q5BKZ1 582 aaKnown RBP18.63■□□□□ 0.57
ABR-202ENST00000302538 NPM1P06748 294 aaKnown RBP eCLIP18.62■□□□□ 0.57
ABR-202ENST00000302538 P3H3Q8IVL6 736 aa18.6■□□□□ 0.57
ABR-202ENST00000302538 SLC24A1O60721 1099 aa18.55■□□□□ 0.56
ABR-202ENST00000302538 ZNF777Q9ULD5 760 aaPredicted RBP18.55■□□□□ 0.56
ABR-202ENST00000302538 NEUROD1Q13562 356 aa18.54■□□□□ 0.56
ABR-202ENST00000302538 CSRNP3Q8WYN3 585 aa18.5■□□□□ 0.55
ABR-202ENST00000302538 CDK11AQ9UQ88 783 aaPredicted RBP18.46■□□□□ 0.55
ABR-202ENST00000302538 STAG3Q9UJ98 1225 aa18.45■□□□□ 0.54
ABR-202ENST00000302538 CLSPNQ9HAW4 1339 aa18.44■□□□□ 0.54
ABR-202ENST00000302538 RSF1Q96T23 1441 aaPredicted RBP18.43■□□□□ 0.54
ABR-202ENST00000302538 BAZ1BQ9UIG0 1483 aaKnown RBP18.37■□□□□ 0.53
ABR-202ENST00000302538 CHGAP10645 457 aaKnown RBP18.36■□□□□ 0.53
ABR-202ENST00000302538 NEFMP07197 916 aa18.35■□□□□ 0.53
ABR-202ENST00000302538 HRCP23327 699 aa18.33■□□□□ 0.53
ABR-202ENST00000302538 ZBTB47Q9UFB7 747 aaPredicted RBP18.31■□□□□ 0.52
ABR-202ENST00000302538 BAZ1AQ9NRL2 1556 aaPredicted RBP18.3■□□□□ 0.52
ABR-202ENST00000302538 MYO15BQ96JP2 1530 aa18.28■□□□□ 0.52
ABR-202ENST00000302538 CHMP7Q8WUX9 453 aaPredicted RBP18.25■□□□□ 0.51
ABR-202ENST00000302538 CECR2Q9BXF3 1484 aa18.24■□□□□ 0.51
ABR-202ENST00000302538 BCL11AQ9H165 835 aa18.22■□□□□ 0.51
ABR-202ENST00000302538 ZNF316A6NFI3 1004 aaPredicted RBP18.17■□□□□ 0.5
ABR-202ENST00000302538 CANXP27824 592 aaKnown RBP18.14■□□□□ 0.5
ABR-202ENST00000302538 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.12■□□□□ 0.49
ABR-202ENST00000302538 SCAF1Q9H7N4 1312 aaKnown RBP18.11■□□□□ 0.49
ABR-202ENST00000302538 ANP32CO43423 234 aa18.11■□□□□ 0.49
ABR-202ENST00000302538 ERCC6Q03468 1493 aa18.07■□□□□ 0.48
ABR-202ENST00000302538 WRNQ14191 1432 aaPredicted RBP eCLIP18.06■□□□□ 0.48
ABR-202ENST00000302538 DIEXFQ68CQ4 756 aaKnown RBP18.05■□□□□ 0.48
ABR-202ENST00000302538 A0A0G2JS52 829 aa18.02■□□□□ 0.47
ABR-202ENST00000302538 KCNH8Q96L42 1107 aa18.02■□□□□ 0.47
ABR-202ENST00000302538 ARID4BQ4LE39 1312 aaPredicted RBP18.01■□□□□ 0.47
ABR-202ENST00000302538 TSPY4P0CV99 314 aa18■□□□□ 0.47
ABR-202ENST00000302538 TSPY10P0CW01 314 aa18■□□□□ 0.47
ABR-202ENST00000302538 SMARCA2P51531 1590 aa18■□□□□ 0.47
ABR-202ENST00000302538 MROH2BQ7Z745 1585 aa18■□□□□ 0.47
ABR-202ENST00000302538 CHIC2Q9UKJ5 165 aa17.97■□□□□ 0.47
ABR-202ENST00000302538 C14orf37Q86TY3 774 aa17.96■□□□□ 0.47
ABR-202ENST00000302538 EEA1Q15075 1411 aa17.95■□□□□ 0.46
ABR-202ENST00000302538 PLEKHG5O94827 1062 aa17.94■□□□□ 0.46
ABR-202ENST00000302538 PPP1R15AO75807 674 aaPredicted RBP17.93■□□□□ 0.46
ABR-202ENST00000302538 SENP3Q9H4L4 574 aaPredicted RBP17.92■□□□□ 0.46
ABR-202ENST00000302538 TRHP20396 242 aaPredicted RBP17.92■□□□□ 0.46
ABR-202ENST00000302538 KIF27Q86VH2 1401 aa17.92■□□□□ 0.46
ABR-202ENST00000302538 ZBTB7CA1YPR0 619 aa17.88■□□□□ 0.45
ABR-202ENST00000302538 PDS5BQ9NTI5 1447 aa17.85■□□□□ 0.45
ABR-202ENST00000302538 RTL5Q5HYW3 569 aaPredicted RBP17.85■□□□□ 0.45
ABR-202ENST00000302538 PLEKHD1A6NEE1 506 aa17.84■□□□□ 0.45
ABR-202ENST00000302538 TONSLQ96HA7 1378 aa17.83■□□□□ 0.45
ABR-202ENST00000302538 HAP1P54257 671 aaPredicted RBP17.83■□□□□ 0.45
ABR-202ENST00000302538 CCDC88BA6NC98 1476 aa17.83■□□□□ 0.45
ABR-202ENST00000302538 MTUS2Q5JR59 1369 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 373.9 ms