RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 MIER1Q8N108 512 aa22.97■■□□□ 1.27
CHAF1A-201ENST00000301280 CTTNBP2Q8WZ74 1663 aa22.97■■□□□ 1.27
CHAF1A-201ENST00000301280 TIAM1Q13009 1591 aa22.96■■□□□ 1.27
CHAF1A-201ENST00000301280 CENPBP07199 599 aaPredicted RBP22.96■■□□□ 1.27
CHAF1A-201ENST00000301280 DNAJC5BQ9UF47 199 aa22.94■■□□□ 1.26
CHAF1A-201ENST00000301280 TOPBP1Q92547 1522 aa22.93■■□□□ 1.26
CHAF1A-201ENST00000301280 HIRIP3Q9BW71 556 aaPredicted RBP22.9■■□□□ 1.26
CHAF1A-201ENST00000301280 CLSPNQ9HAW4 1339 aa22.9■■□□□ 1.26
CHAF1A-201ENST00000301280 ABCA5Q8WWZ7 1642 aa22.88■■□□□ 1.25
CHAF1A-201ENST00000301280 POLA1P09884 1462 aaPredicted RBP22.87■■□□□ 1.25
CHAF1A-201ENST00000301280 EFCAB5A4FU69 1503 aa22.87■■□□□ 1.25
CHAF1A-201ENST00000301280 CARMIL1Q5VZK9 1371 aa22.86■■□□□ 1.25
CHAF1A-201ENST00000301280 AQRO60306 1485 aaKnown RBP eCLIP22.81■■□□□ 1.245e-7■■■■■ 30.5
CHAF1A-201ENST00000301280 PCF11O94913 1555 aaKnown RBP22.79■■□□□ 1.24
CHAF1A-201ENST00000301280 DHX57Q6P158 1386 aaKnown RBP22.78■■□□□ 1.24
CHAF1A-201ENST00000301280 SAMD9Q5K651 1589 aa22.77■■□□□ 1.24
CHAF1A-201ENST00000301280 URB2Q14146 1524 aaKnown RBP22.77■■□□□ 1.23
CHAF1A-201ENST00000301280 LRRC9Q6ZRR7 1453 aa22.75■■□□□ 1.23
CHAF1A-201ENST00000301280 NESP48681 1621 aa22.74■■□□□ 1.23
CHAF1A-201ENST00000301280 KIF21AQ7Z4S6 1674 aa22.74■■□□□ 1.23
CHAF1A-201ENST00000301280 FYCO1Q9BQS8 1478 aa22.73■■□□□ 1.23
CHAF1A-201ENST00000301280 FHAD1B1AJZ9 1412 aa22.72■■□□□ 1.23
CHAF1A-201ENST00000301280 RAD54L2Q9Y4B4 1467 aa22.72■■□□□ 1.23
CHAF1A-201ENST00000301280 CNGB1Q14028 1251 aaPredicted RBP22.71■■□□□ 1.23
CHAF1A-201ENST00000301280 LRRIQ1Q96JM4 1722 aa22.71■■□□□ 1.23
CHAF1A-201ENST00000301280 CCNB3Q8WWL7 1395 aa22.71■■□□□ 1.23
CHAF1A-201ENST00000301280 SIN3AQ96ST3 1273 aa22.7■■□□□ 1.22
CHAF1A-201ENST00000301280 TARBP1Q13395 1621 aaKnown RBP22.7■■□□□ 1.22
CHAF1A-201ENST00000301280 THOC2Q8NI27 1593 aaKnown RBP22.64■■□□□ 1.22
CHAF1A-201ENST00000301280 CASKIN1Q8WXD9 1431 aa22.64■■□□□ 1.21
CHAF1A-201ENST00000301280 SNAPC4Q5SXM2 1469 aa22.64■■□□□ 1.21
CHAF1A-201ENST00000301280 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.63■■□□□ 1.21
CHAF1A-201ENST00000301280 CHIC2Q9UKJ5 165 aa22.63■■□□□ 1.21
CHAF1A-201ENST00000301280 TDRD9Q8NDG6 1382 aaKnown RBP22.62■■□□□ 1.21
CHAF1A-201ENST00000301280 FBLN2P98095 1184 aa22.6■■□□□ 1.21
CHAF1A-201ENST00000301280 MAPKBP1O60336 1514 aa22.6■■□□□ 1.21
CHAF1A-201ENST00000301280 PBRM1Q86U86 1689 aa22.6■■□□□ 1.21
CHAF1A-201ENST00000301280 DDX10Q13206 875 aaKnown RBP22.53■■□□□ 1.2
CHAF1A-201ENST00000301280 PHLDB1Q86UU1 1377 aa22.53■■□□□ 1.2
CHAF1A-201ENST00000301280 PDS5BQ9NTI5 1447 aa22.53■■□□□ 1.2
CHAF1A-201ENST00000301280 KCNH8Q96L42 1107 aa22.5■■□□□ 1.19
CHAF1A-201ENST00000301280 FHOD3Q2V2M9 1422 aa22.49■■□□□ 1.19
CHAF1A-201ENST00000301280 GRIN2BQ13224 1484 aa22.49■■□□□ 1.19
CHAF1A-201ENST00000301280 GAPVD1Q14C86 1478 aa22.49■■□□□ 1.19
CHAF1A-201ENST00000301280 ARHGEF11O15085 1522 aa22.48■■□□□ 1.19
CHAF1A-201ENST00000301280 FMN1Q68DA7 1419 aa22.48■■□□□ 1.19
CHAF1A-201ENST00000301280 TRIM52Q96A61 297 aa22.47■■□□□ 1.19
CHAF1A-201ENST00000301280 BCANQ96GW7 911 aa22.47■■□□□ 1.19
CHAF1A-201ENST00000301280 RRP7BPQ9NSQ0 103 aa22.44■■□□□ 1.18
CHAF1A-201ENST00000301280 ADAMTS12P58397 1594 aa22.44■■□□□ 1.18
CHAF1A-201ENST00000301280 RAB3GAP2Q9H2M9 1393 aa22.43■■□□□ 1.18
CHAF1A-201ENST00000301280 SETD5Q9C0A6 1442 aa22.42■■□□□ 1.18
CHAF1A-201ENST00000301280 SUPT6HQ7KZ85 1726 aaKnown RBP22.39■■□□□ 1.17
CHAF1A-201ENST00000301280 POLR3GLQ9BT43 218 aa22.37■■□□□ 1.17
CHAF1A-201ENST00000301280 EHBP1L1Q8N3D4 1523 aa22.36■■□□□ 1.17
CHAF1A-201ENST00000301280 MTUS2Q5JR59 1369 aa22.33■■□□□ 1.17
CHAF1A-201ENST00000301280 UGGT2Q9NYU1 1516 aa22.33■■□□□ 1.17
CHAF1A-201ENST00000301280 FGD6Q6ZV73 1430 aa22.32■■□□□ 1.16
CHAF1A-201ENST00000301280 WDR62O43379 1518 aa22.32■■□□□ 1.16
CHAF1A-201ENST00000301280 ZNF777Q9ULD5 760 aaPredicted RBP22.31■■□□□ 1.16
CHAF1A-201ENST00000301280 FOXD1Q16676 465 aa22.31■■□□□ 1.16
CHAF1A-201ENST00000301280 MRC2Q9UBG0 1479 aa22.3■■□□□ 1.16
CHAF1A-201ENST00000301280 IQGAP2Q13576 1575 aa22.3■■□□□ 1.16
CHAF1A-201ENST00000301280 GCC2Q8IWJ2 1684 aa22.3■■□□□ 1.16
CHAF1A-201ENST00000301280 SENP3-EIF4A1A0A087X0R7 540 aa22.29■■□□□ 1.16
CHAF1A-201ENST00000301280 HECW1Q76N89 1606 aa22.29■■□□□ 1.16
CHAF1A-201ENST00000301280 CCDC18Q5T9S5 1454 aa22.29■■□□□ 1.16
CHAF1A-201ENST00000301280 PTPN23Q9H3S7 1636 aa22.29■■□□□ 1.16
CHAF1A-201ENST00000301280 MAGI3Q5TCQ9 1506 aa22.28■■□□□ 1.16
CHAF1A-201ENST00000301280 TCOF1Q13428 1488 aaKnown RBP22.28■■□□□ 1.16
CHAF1A-201ENST00000301280 ZNF326Q5BKZ1 582 aaKnown RBP22.26■■□□□ 1.15
CHAF1A-201ENST00000301280 HFM1A2PYH4 1435 aa22.23■■□□□ 1.15
CHAF1A-201ENST00000301280 NCOA2Q15596 1464 aa22.23■■□□□ 1.15
CHAF1A-201ENST00000301280 MYOM3Q5VTT5 1437 aa22.21■■□□□ 1.15
CHAF1A-201ENST00000301280 TIMELESSQ9UNS1 1208 aa22.21■■□□□ 1.15
CHAF1A-201ENST00000301280 PTPRKQ15262 1439 aa22.18■■□□□ 1.14
CHAF1A-201ENST00000301280 IFT140Q96RY7 1462 aa22.18■■□□□ 1.14
CHAF1A-201ENST00000301280 AKNAQ7Z591 1439 aa22.17■■□□□ 1.14
CHAF1A-201ENST00000301280 KIAA0556O60303 1618 aa22.13■■□□□ 1.13
CHAF1A-201ENST00000301280 KDM5BQ9UGL1 1544 aa22.13■■□□□ 1.13
CHAF1A-201ENST00000301280 EPRSP07814 1512 aaKnown RBP22.12■■□□□ 1.13
CHAF1A-201ENST00000301280 UACAQ9BZF9 1416 aa22.12■■□□□ 1.13
CHAF1A-201ENST00000301280 TONSLQ96HA7 1378 aa22.11■■□□□ 1.13
CHAF1A-201ENST00000301280 NAIPQ13075 1403 aa22.11■■□□□ 1.13
CHAF1A-201ENST00000301280 EIF4G3O43432 1585 aaKnown RBP22.1■■□□□ 1.13
CHAF1A-201ENST00000301280 DISP1Q96F81 1524 aa22.07■■□□□ 1.12
CHAF1A-201ENST00000301280 MIA2Q96PC5 1412 aa22.06■■□□□ 1.12
CHAF1A-201ENST00000301280 KIAA0586Q9BVV6 1533 aa22.05■■□□□ 1.12
CHAF1A-201ENST00000301280 ADCY10Q96PN6 1610 aa22.04■■□□□ 1.12
CHAF1A-201ENST00000301280 IRX6P78412 446 aaPredicted RBP22.03■■□□□ 1.12
CHAF1A-201ENST00000301280 DENND4BO75064 1496 aaPredicted RBP22.03■■□□□ 1.12
CHAF1A-201ENST00000301280 CHMP7Q8WUX9 453 aaPredicted RBP22.03■■□□□ 1.12
CHAF1A-201ENST00000301280 ANP32CO43423 234 aa22.02■■□□□ 1.12
CHAF1A-201ENST00000301280 RAPGEF6Q8TEU7 1601 aa22.02■■□□□ 1.12
CHAF1A-201ENST00000301280 MYT1Q01538 1121 aa22.01■■□□□ 1.11
CHAF1A-201ENST00000301280 ZNF644Q9H582 1327 aaPredicted RBP22.01■■□□□ 1.11
CHAF1A-201ENST00000301280 ZNF608Q9ULD9 1512 aaPredicted RBP22.01■■□□□ 1.11
CHAF1A-201ENST00000301280 DNMT1P26358 1616 aaKnown RBP22■■□□□ 1.11
CHAF1A-201ENST00000301280 FKBP8Q14318 412 aa21.99■■□□□ 1.11
CHAF1A-201ENST00000301280 SUPT16HQ9Y5B9 1047 aaKnown RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms