RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 ERCC6Q03468 1493 aa21.69■■□□□ 1.06
SMG8-201ENST00000300917 CCNB3Q8WWL7 1395 aa21.69■■□□□ 1.06
SMG8-201ENST00000300917 MRC2Q9UBG0 1479 aa21.68■■□□□ 1.06
SMG8-201ENST00000300917 FHAD1B1AJZ9 1412 aa21.67■■□□□ 1.06
SMG8-201ENST00000300917 CUL7Q14999 1698 aa21.66■■□□□ 1.06
SMG8-201ENST00000300917 ZNF608Q9ULD9 1512 aaPredicted RBP21.66■■□□□ 1.06
SMG8-201ENST00000300917 ABCA5Q8WWZ7 1642 aa21.66■■□□□ 1.06
SMG8-201ENST00000300917 FBLN2P98095 1184 aa21.65■■□□□ 1.06
SMG8-201ENST00000300917 WDR97A6NE52 1622 aa21.65■■□□□ 1.06
SMG8-201ENST00000300917 PCF11O94913 1555 aaKnown RBP21.65■■□□□ 1.06
SMG8-201ENST00000300917 PHLDB1Q86UU1 1377 aa21.63■■□□□ 1.05
SMG8-201ENST00000300917 TIAM1Q13009 1591 aa21.63■■□□□ 1.05
SMG8-201ENST00000300917 TARBP1Q13395 1621 aaKnown RBP21.62■■□□□ 1.05
SMG8-201ENST00000300917 LRRC9Q6ZRR7 1453 aa21.61■■□□□ 1.05
SMG8-201ENST00000300917 RRBP1Q9P2E9 1410 aaKnown RBP21.6■■□□□ 1.05
SMG8-201ENST00000300917 DIEXFQ68CQ4 756 aaKnown RBP21.56■■□□□ 1.04
SMG8-201ENST00000300917 CTTNBP2Q8WZ74 1663 aa21.54■■□□□ 1.04
SMG8-201ENST00000300917 MTUS2Q5JR59 1369 aa21.53■■□□□ 1.04
SMG8-201ENST00000300917 DHX57Q6P158 1386 aaKnown RBP21.52■■□□□ 1.04
SMG8-201ENST00000300917 FMN1Q68DA7 1419 aa21.51■■□□□ 1.03
SMG8-201ENST00000300917 CASKIN1Q8WXD9 1431 aa21.51■■□□□ 1.03
SMG8-201ENST00000300917 EFCAB5A4FU69 1503 aa21.51■■□□□ 1.03
SMG8-201ENST00000300917 GRIN2BQ13224 1484 aa21.49■■□□□ 1.03
SMG8-201ENST00000300917 ZNF316A6NFI3 1004 aaPredicted RBP21.48■■□□□ 1.03
SMG8-201ENST00000300917 FYCO1Q9BQS8 1478 aa21.47■■□□□ 1.03
SMG8-201ENST00000300917 CHMP7Q8WUX9 453 aaPredicted RBP21.47■■□□□ 1.03
SMG8-201ENST00000300917 IFT140Q96RY7 1462 aa21.46■■□□□ 1.03
SMG8-201ENST00000300917 RAB3GAP2Q9H2M9 1393 aa21.45■■□□□ 1.03
SMG8-201ENST00000300917 PBRM1Q86U86 1689 aa21.45■■□□□ 1.02
SMG8-201ENST00000300917 SNAPC4Q5SXM2 1469 aa21.44■■□□□ 1.02
SMG8-201ENST00000300917 MAP3K1Q13233 1512 aa21.42■■□□□ 1.02
SMG8-201ENST00000300917 WDR62O43379 1518 aa21.42■■□□□ 1.02
SMG8-201ENST00000300917 ADAMTS12P58397 1594 aa21.4■■□□□ 1.02
SMG8-201ENST00000300917 NEUROD1Q13562 356 aa21.39■■□□□ 1.01
SMG8-201ENST00000300917 CFAP43Q8NDM7 1665 aa21.37■■□□□ 1.01
SMG8-201ENST00000300917 SAMD9Q5K651 1589 aa21.36■■□□□ 1.01
SMG8-201ENST00000300917 IQGAP2Q13576 1575 aa21.36■■□□□ 1.01
SMG8-201ENST00000300917 CHIC2Q9UKJ5 165 aa21.35■■□□□ 1.01
SMG8-201ENST00000300917 SIN3AQ96ST3 1273 aa21.33■■□□□ 1.01
SMG8-201ENST00000300917 SETD5Q9C0A6 1442 aa21.33■■□□□ 1.01
SMG8-201ENST00000300917 EIF4G3O43432 1585 aaKnown RBP21.33■■□□□ 1.01
SMG8-201ENST00000300917 FGD6Q6ZV73 1430 aa21.3■■□□□ 1
SMG8-201ENST00000300917 CDK13Q14004 1512 aaKnown RBP21.29■■□□□ 1
SMG8-201ENST00000300917 NCOA2Q15596 1464 aa21.29■■□□□ 1
SMG8-201ENST00000300917 GRIN2AQ12879 1464 aa21.28■■□□□ 1
SMG8-201ENST00000300917 RRP7BPQ9NSQ0 103 aa21.26■□□□□ 0.99
SMG8-201ENST00000300917 LRRIQ1Q96JM4 1722 aa21.26■□□□□ 0.99
SMG8-201ENST00000300917 THOC2Q8NI27 1593 aaKnown RBP21.26■□□□□ 0.99
SMG8-201ENST00000300917 YTHDC1Q96MU7 727 aaKnown RBP21.25■□□□□ 0.99
SMG8-201ENST00000300917 MAGI3Q5TCQ9 1506 aa21.24■□□□□ 0.99
SMG8-201ENST00000300917 CLSPNQ9HAW4 1339 aa21.23■□□□□ 0.99
SMG8-201ENST00000300917 KIAA0586Q9BVV6 1533 aa21.23■□□□□ 0.99
SMG8-201ENST00000300917 PTPRKQ15262 1439 aa21.22■□□□□ 0.99
SMG8-201ENST00000300917 JPH4Q96JJ6 628 aa21.21■□□□□ 0.99
SMG8-201ENST00000300917 MIER1Q8N108 512 aa21.21■□□□□ 0.99
SMG8-201ENST00000300917 EPRSP07814 1512 aaKnown RBP21.21■□□□□ 0.99
SMG8-201ENST00000300917 MYOM3Q5VTT5 1437 aa21.2■□□□□ 0.98
SMG8-201ENST00000300917 DISP1Q96F81 1524 aa21.18■□□□□ 0.98
SMG8-201ENST00000300917 SYNJ2O15056 1496 aa21.15■□□□□ 0.98
SMG8-201ENST00000300917 ZNF644Q9H582 1327 aaPredicted RBP21.15■□□□□ 0.98
SMG8-201ENST00000300917 UGGT2Q9NYU1 1516 aa21.15■□□□□ 0.98
SMG8-201ENST00000300917 MAPKBP1O60336 1514 aa21.14■□□□□ 0.97
SMG8-201ENST00000300917 ZNF777Q9ULD5 760 aaPredicted RBP21.14■□□□□ 0.97
SMG8-201ENST00000300917 EHBP1L1Q8N3D4 1523 aa21.13■□□□□ 0.97
SMG8-201ENST00000300917 MAGI1Q96QZ7 1491 aaPredicted RBP21.13■□□□□ 0.97
SMG8-201ENST00000300917 TRIM52Q96A61 297 aa21.13■□□□□ 0.97
SMG8-201ENST00000300917 HECW1Q76N89 1606 aa21.13■□□□□ 0.97
SMG8-201ENST00000300917 CCDC18Q5T9S5 1454 aa21.12■□□□□ 0.97
SMG8-201ENST00000300917 CEP170Q5SW79 1584 aa21.12■□□□□ 0.97
SMG8-201ENST00000300917 PLB1Q6P1J6 1458 aa21.12■□□□□ 0.97
SMG8-201ENST00000300917 HIRIP3Q9BW71 556 aaPredicted RBP21.12■□□□□ 0.97
SMG8-201ENST00000300917 SUPT6HQ7KZ85 1726 aaKnown RBP21.11■□□□□ 0.97
SMG8-201ENST00000300917 KIAA0556O60303 1618 aa21.1■□□□□ 0.97
SMG8-201ENST00000300917 NUP153P49790 1475 aaKnown RBP21.07■□□□□ 0.96
SMG8-201ENST00000300917 CDK11AQ9UQ88 783 aaPredicted RBP21.07■□□□□ 0.96
SMG8-201ENST00000300917 PRG4Q92954 1404 aaPredicted RBP21.06■□□□□ 0.96
SMG8-201ENST00000300917 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.05■□□□□ 0.96
SMG8-201ENST00000300917 PTPN23Q9H3S7 1636 aa21.04■□□□□ 0.96
SMG8-201ENST00000300917 FOXD1Q16676 465 aa21.03■□□□□ 0.96
SMG8-201ENST00000300917 NAIPQ13075 1403 aa21.02■□□□□ 0.96
SMG8-201ENST00000300917 CARMIL2Q6F5E8 1435 aa21.02■□□□□ 0.96
SMG8-201ENST00000300917 SCAF1Q9H7N4 1312 aaKnown RBP21.02■□□□□ 0.95
SMG8-201ENST00000300917 HFM1A2PYH4 1435 aa21■□□□□ 0.95
SMG8-201ENST00000300917 CFDP1Q9UEE9 299 aaPredicted RBP21■□□□□ 0.95
SMG8-201ENST00000300917 NUP160Q12769 1436 aa20.98■□□□□ 0.95
SMG8-201ENST00000300917 RAPGEF6Q8TEU7 1601 aa20.98■□□□□ 0.95
SMG8-201ENST00000300917 ARHGEF11O15085 1522 aa20.96■□□□□ 0.95
SMG8-201ENST00000300917 ACIN1Q9UKV3 1341 aaKnown RBP20.95■□□□□ 0.94
SMG8-201ENST00000300917 PLEKHD1A6NEE1 506 aa20.95■□□□□ 0.94
SMG8-201ENST00000300917 TONSLQ96HA7 1378 aa20.93■□□□□ 0.94
SMG8-201ENST00000300917 CENPBP07199 599 aaPredicted RBP20.93■□□□□ 0.94
SMG8-201ENST00000300917 UACAQ9BZF9 1416 aa20.91■□□□□ 0.94
SMG8-201ENST00000300917 PPP1R15AO75807 674 aaPredicted RBP20.89■□□□□ 0.94
SMG8-201ENST00000300917 DDX10Q13206 875 aaKnown RBP20.89■□□□□ 0.93
SMG8-201ENST00000300917 TROQ12816 1431 aaPredicted RBP20.89■□□□□ 0.93
SMG8-201ENST00000300917 PTPRGP23470 1445 aa20.88■□□□□ 0.93
SMG8-201ENST00000300917 MIA2Q96PC5 1412 aa20.88■□□□□ 0.93
SMG8-201ENST00000300917 TCOF1Q13428 1488 aaKnown RBP20.87■□□□□ 0.93
SMG8-201ENST00000300917 KDM6BO15054 1643 aa20.87■□□□□ 0.93
SMG8-201ENST00000300917 MPHOSPH9Q99550 1183 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms