RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 SETD5Q9C0A6 1442 aa20.46■□□□□ 0.87
COL6A2-201ENST00000300527 CCER2I3L3R5 266 aa20.43■□□□□ 0.86
COL6A2-201ENST00000300527 MAPKBP1O60336 1514 aa20.42■□□□□ 0.86
COL6A2-201ENST00000300527 NBR1Q14596 966 aa20.4■□□□□ 0.86
COL6A2-201ENST00000300527 TONSLQ96HA7 1378 aa20.39■□□□□ 0.86
COL6A2-201ENST00000300527 PRXQ9BXM0 1461 aa20.37■□□□□ 0.85
COL6A2-201ENST00000300527 B4GALNT3Q6L9W6 998 aa20.36■□□□□ 0.85
COL6A2-201ENST00000300527 FAM9BQ8IZU0 186 aa20.35■□□□□ 0.85
COL6A2-201ENST00000300527 ARHGAP35Q9NRY4 1499 aa20.34■□□□□ 0.85
COL6A2-201ENST00000300527 ATAD2BQ9ULI0 1458 aa20.34■□□□□ 0.85
COL6A2-201ENST00000300527 SENP3-EIF4A1A0A087X0R7 540 aa20.34■□□□□ 0.85
COL6A2-201ENST00000300527 PHLDB1Q86UU1 1377 aa20.34■□□□□ 0.85
COL6A2-201ENST00000300527 KIF27Q86VH2 1401 aa20.34■□□□□ 0.85
COL6A2-201ENST00000300527 CUX2O14529 1486 aa20.31■□□□□ 0.84
COL6A2-201ENST00000300527 DEKP35659 375 aaKnown RBP20.3■□□□□ 0.84
COL6A2-201ENST00000300527 FANCIQ9NVI1 1328 aa20.28■□□□□ 0.84
COL6A2-201ENST00000300527 UNC13AQ9UPW8 1703 aa20.28■□□□□ 0.84
COL6A2-201ENST00000300527 TOP2BQ02880 1626 aa20.26■□□□□ 0.83
COL6A2-201ENST00000300527 ERICH3Q5RHP9 1530 aa20.26■□□□□ 0.83
COL6A2-201ENST00000300527 CCDC184Q52MB2 194 aa20.23■□□□□ 0.83
COL6A2-201ENST00000300527 PPP4R2Q9NY27 417 aa20.22■□□□□ 0.83
COL6A2-201ENST00000300527 POLR3GLQ9BT43 218 aa20.21■□□□□ 0.83
COL6A2-201ENST00000300527 TIMELESSQ9UNS1 1208 aa20.18■□□□□ 0.82
COL6A2-201ENST00000300527 MRS2Q9HD23 443 aa20.18■□□□□ 0.82
COL6A2-201ENST00000300527 CHIC2Q9UKJ5 165 aa20.17■□□□□ 0.82
COL6A2-201ENST00000300527 HSPA5P11021 654 aaKnown RBP20.16■□□□□ 0.82
COL6A2-201ENST00000300527 LRRC9Q6ZRR7 1453 aa20.15■□□□□ 0.82
COL6A2-201ENST00000300527 BICRAQ9NZM4 1560 aa20.14■□□□□ 0.81
COL6A2-201ENST00000300527 PAK3O75914 559 aaPredicted RBP20.13■□□□□ 0.81
COL6A2-201ENST00000300527 CUX1P39880 1505 aa20.13■□□□□ 0.81
COL6A2-201ENST00000300527 RRP7BPQ9NSQ0 103 aa20.12■□□□□ 0.81
COL6A2-201ENST00000300527 NOP58Q9Y2X3 529 aaKnown RBP20.12■□□□□ 0.81
COL6A2-201ENST00000300527 TIAM1Q13009 1591 aa20.11■□□□□ 0.81
COL6A2-201ENST00000300527 CARMIL1Q5VZK9 1371 aa20.1■□□□□ 0.81
COL6A2-201ENST00000300527 WASHC2AQ641Q2 1341 aa20.09■□□□□ 0.81
COL6A2-201ENST00000300527 PEG3Q9GZU2 1588 aa20.09■□□□□ 0.81
COL6A2-201ENST00000300527 IGF1RP08069 1367 aa20.07■□□□□ 0.8
COL6A2-201ENST00000300527 FHOD3Q2V2M9 1422 aa20.07■□□□□ 0.8
COL6A2-201ENST00000300527 RTL5Q5HYW3 569 aaPredicted RBP20.07■□□□□ 0.8
COL6A2-201ENST00000300527 NPM2Q86SE8 214 aaKnown RBP20.06■□□□□ 0.8
COL6A2-201ENST00000300527 FOXD1Q16676 465 aa20.05■□□□□ 0.8
COL6A2-201ENST00000300527 EIF4G2P78344 907 aaKnown RBP eCLIP20.05■□□□□ 0.8
COL6A2-201ENST00000300527 RTN4Q9NQC3 1192 aaKnown RBP20.03■□□□□ 0.8
COL6A2-201ENST00000300527 ARID3CA6NKF2 412 aa20.03■□□□□ 0.8
COL6A2-201ENST00000300527 CCDC136Q96JN2 1154 aa20.02■□□□□ 0.8
COL6A2-201ENST00000300527 BIVM-ERCC5R4GMW8 1640 aa20.02■□□□□ 0.8
COL6A2-201ENST00000300527 ANP32AP39687 249 aaKnown RBP20.01■□□□□ 0.79
COL6A2-201ENST00000300527 MTUS2Q5JR59 1369 aa20.01■□□□□ 0.79
COL6A2-201ENST00000300527 CCDC18Q5T9S5 1454 aa20■□□□□ 0.79
COL6A2-201ENST00000300527 MYT1LQ9UL68 1186 aa20■□□□□ 0.79
COL6A2-201ENST00000300527 FHAD1B1AJZ9 1412 aa19.99■□□□□ 0.79
COL6A2-201ENST00000300527 C11orf95C9JLR9 678 aaPredicted RBP19.97■□□□□ 0.79
COL6A2-201ENST00000300527 PRKRIP1Q9H875 184 aaPredicted RBP19.96■□□□□ 0.79
COL6A2-201ENST00000300527 ZNF326Q5BKZ1 582 aaKnown RBP19.96■□□□□ 0.79
COL6A2-201ENST00000300527 ZBTB47Q9UFB7 747 aaPredicted RBP19.96■□□□□ 0.79
COL6A2-201ENST00000300527 ANO8Q9HCE9 1232 aaPredicted RBP19.95■□□□□ 0.78
COL6A2-201ENST00000300527 ERICH6BQ5W0A0 696 aa19.93■□□□□ 0.78
COL6A2-201ENST00000300527 PRKCSHP14314 528 aaPredicted RBP19.93■□□□□ 0.78
COL6A2-201ENST00000300527 L3MBTL2Q969R5 705 aa19.92■□□□□ 0.78
COL6A2-201ENST00000300527 SALL2Q9Y467 1007 aaPredicted RBP19.91■□□□□ 0.78
COL6A2-201ENST00000300527 LAS1LQ9Y4W2 734 aaKnown RBP19.9■□□□□ 0.78
COL6A2-201ENST00000300527 PTPRKQ15262 1439 aa19.9■□□□□ 0.78
COL6A2-201ENST00000300527 PCF11O94913 1555 aaKnown RBP19.9■□□□□ 0.78
COL6A2-201ENST00000300527 AQRO60306 1485 aaKnown RBP eCLIP19.89■□□□□ 0.77
COL6A2-201ENST00000300527 FGD6Q6ZV73 1430 aa19.89■□□□□ 0.77
COL6A2-201ENST00000300527 AKNAQ7Z591 1439 aa19.89■□□□□ 0.77
COL6A2-201ENST00000300527 UACAQ9BZF9 1416 aa19.88■□□□□ 0.77
COL6A2-201ENST00000300527 ZBED9Q6R2W3 1325 aa19.88■□□□□ 0.77
COL6A2-201ENST00000300527 IPO9Q96P70 1041 aaKnown RBP19.85■□□□□ 0.77
COL6A2-201ENST00000300527 IL27Q8NEV9 243 aa19.85■□□□□ 0.77
COL6A2-201ENST00000300527 CNTLNQ9NXG0 1405 aa19.84■□□□□ 0.77
COL6A2-201ENST00000300527 MAP3K1Q13233 1512 aa19.84■□□□□ 0.77
COL6A2-201ENST00000300527 CCDC7Q96M83 1385 aa19.8■□□□□ 0.76
COL6A2-201ENST00000300527 MPHOSPH9Q99550 1183 aa19.79■□□□□ 0.76
COL6A2-201ENST00000300527 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.79■□□□□ 0.76
COL6A2-201ENST00000300527 NAIPQ13075 1403 aa19.79■□□□□ 0.76
COL6A2-201ENST00000300527 FMN1Q68DA7 1419 aa19.79■□□□□ 0.76
COL6A2-201ENST00000300527 HFM1A2PYH4 1435 aa19.79■□□□□ 0.76
COL6A2-201ENST00000300527 FGD5Q6ZNL6 1462 aa19.78■□□□□ 0.76
COL6A2-201ENST00000300527 NBPF8Q3BBV2 869 aa19.78■□□□□ 0.76
COL6A2-201ENST00000300527 KIF7Q2M1P5 1343 aa19.77■□□□□ 0.76
COL6A2-201ENST00000300527 CFTRP13569 1480 aa19.76■□□□□ 0.75
COL6A2-201ENST00000300527 NUDCQ9Y266 331 aa19.76■□□□□ 0.75
COL6A2-201ENST00000300527 NEFMP07197 916 aa19.75■□□□□ 0.75
COL6A2-201ENST00000300527 TMC1Q8TDI8 760 aa19.74■□□□□ 0.75
COL6A2-201ENST00000300527 CASKIN1Q8WXD9 1431 aa19.73■□□□□ 0.75
COL6A2-201ENST00000300527 PTPN23Q9H3S7 1636 aa19.71■□□□□ 0.75
COL6A2-201ENST00000300527 SLC4A1APQ9BWU0 796 aaKnown RBP19.7■□□□□ 0.74
COL6A2-201ENST00000300527 FYCO1Q9BQS8 1478 aa19.7■□□□□ 0.74
COL6A2-201ENST00000300527 RAD54L2Q9Y4B4 1467 aa19.7■□□□□ 0.74
COL6A2-201ENST00000300527 NCOA2Q15596 1464 aa19.68■□□□□ 0.74
COL6A2-201ENST00000300527 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.68■□□□□ 0.74
COL6A2-201ENST00000300527 CFAP43Q8NDM7 1665 aa19.67■□□□□ 0.74
COL6A2-201ENST00000300527 EXOC6Q8TAG9 804 aa19.67■□□□□ 0.74
COL6A2-201ENST00000300527 NCAPD3P42695 1498 aa19.67■□□□□ 0.74
COL6A2-201ENST00000300527 MYOM3Q5VTT5 1437 aa19.66■□□□□ 0.74
COL6A2-201ENST00000300527 SKAP1Q86WV1 359 aa19.66■□□□□ 0.74
COL6A2-201ENST00000300527 KDM5BQ9UGL1 1544 aa19.64■□□□□ 0.73
COL6A2-201ENST00000300527 NCOA1Q15788 1441 aa19.63■□□□□ 0.73
COL6A2-201ENST00000300527 SMG6Q86US8 1419 aaKnown RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms