RNA–Protein interactions for RNA: ENST00000297977.9

HDX-201, Transcript of highly divergent homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDX, Length 6,200 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDX-201ENST00000297977 CLIP1P30622 1438 aa4.55□□□□□ -1.68
HDX-201ENST00000297977 RAPGEF2Q9Y4G8 1499 aa4.54□□□□□ -1.68
HDX-201ENST00000297977 PTPRGP23470 1445 aa4.54□□□□□ -1.68
HDX-201ENST00000297977 FAM50AQ14320 339 aaKnown RBP4.54□□□□□ -1.68
HDX-201ENST00000297977 ITGAEP38570 1179 aa4.53□□□□□ -1.68
HDX-201ENST00000297977 DNMBPQ6XZF7 1577 aa4.53□□□□□ -1.68
HDX-201ENST00000297977 AQRO60306 1485 aaKnown RBP eCLIP4.53□□□□□ -1.68
HDX-201ENST00000297977 TNIKQ9UKE5 1360 aa4.53□□□□□ -1.68
HDX-201ENST00000297977 POLA1P09884 1462 aaPredicted RBP4.53□□□□□ -1.69
HDX-201ENST00000297977 FMN1Q68DA7 1419 aa4.52□□□□□ -1.69
HDX-201ENST00000297977 IGF1RP08069 1367 aa4.52□□□□□ -1.69
HDX-201ENST00000297977 EFCAB2Q5VUJ9 269 aa4.52□□□□□ -1.69
HDX-201ENST00000297977 RAD54L2Q9Y4B4 1467 aa4.52□□□□□ -1.69
HDX-201ENST00000297977 CFDP1Q9UEE9 299 aaPredicted RBP4.51□□□□□ -1.69
HDX-201ENST00000297977 MAGI1Q96QZ7 1491 aaPredicted RBP4.51□□□□□ -1.69
HDX-201ENST00000297977 HOMEZQ8IX15 550 aa4.5□□□□□ -1.69
HDX-201ENST00000297977 ARID4BQ4LE39 1312 aaPredicted RBP4.5□□□□□ -1.69
HDX-201ENST00000297977 TRIM52Q96A61 297 aa4.49□□□□□ -1.69
HDX-201ENST00000297977 RSPH4AQ5TD94 716 aa4.49□□□□□ -1.69
HDX-201ENST00000297977 ABCA10Q8WWZ4 1543 aa4.49□□□□□ -1.69
HDX-201ENST00000297977 STAG3Q9UJ98 1225 aa4.49□□□□□ -1.69
HDX-201ENST00000297977 SYNJ2O15056 1496 aa4.48□□□□□ -1.69
HDX-201ENST00000297977 CCNB3Q8WWL7 1395 aa4.48□□□□□ -1.69
HDX-201ENST00000297977 TRIM26Q12899 539 aaPredicted RBP4.48□□□□□ -1.69
HDX-201ENST00000297977 PCGF6Q9BYE7 350 aa4.48□□□□□ -1.69
HDX-201ENST00000297977 URB2Q14146 1524 aaKnown RBP4.47□□□□□ -1.69
HDX-201ENST00000297977 CCER1Q8TC90 406 aaPredicted RBP4.47□□□□□ -1.69
HDX-201ENST00000297977 KIAA0586Q9BVV6 1533 aa4.47□□□□□ -1.69
HDX-201ENST00000297977 FAM69CQ0P6D2 419 aa4.47□□□□□ -1.69
HDX-201ENST00000297977 SNAPC4Q5SXM2 1469 aa4.47□□□□□ -1.69
HDX-201ENST00000297977 PRG4Q92954 1404 aaPredicted RBP4.47□□□□□ -1.69
HDX-201ENST00000297977 PPARGC1BQ86YN6 1023 aaKnown RBP4.46□□□□□ -1.69
HDX-201ENST00000297977 BCANQ96GW7 911 aa4.46□□□□□ -1.69
HDX-201ENST00000297977 CEP162Q5TB80 1403 aa4.46□□□□□ -1.7
HDX-201ENST00000297977 CUX1P39880 1505 aa4.45□□□□□ -1.7
HDX-201ENST00000297977 TOP2BQ02880 1626 aa4.45□□□□□ -1.7
HDX-201ENST00000297977 SYNJ1O43426 1573 aa4.45□□□□□ -1.7
HDX-201ENST00000297977 DNAJC5Q9H3Z4 198 aa4.44□□□□□ -1.7
HDX-201ENST00000297977 EIF5BO60841 1220 aaKnown RBP4.44□□□□□ -1.7
HDX-201ENST00000297977 ERICH3Q5RHP9 1530 aa4.44□□□□□ -1.7
HDX-201ENST00000297977 HDGFP51858 240 aaKnown RBP4.44□□□□□ -1.7
HDX-201ENST00000297977 WDR62O43379 1518 aa4.44□□□□□ -1.7
HDX-201ENST00000297977 AEBP2Q6ZN18 517 aaPredicted RBP4.43□□□□□ -1.7
HDX-201ENST00000297977 GRIN2AQ12879 1464 aa4.43□□□□□ -1.7
HDX-201ENST00000297977 CCDC18Q5T9S5 1454 aa4.43□□□□□ -1.7
HDX-201ENST00000297977 ZNF608Q9ULD9 1512 aaPredicted RBP4.43□□□□□ -1.7
HDX-201ENST00000297977 TIMELESSQ9UNS1 1208 aa4.43□□□□□ -1.7
HDX-201ENST00000297977 KANK1Q14678 1352 aa4.42□□□□□ -1.7
HDX-201ENST00000297977 VPS8Q8N3P4 1428 aa4.42□□□□□ -1.7
HDX-201ENST00000297977 CHGAP10645 457 aaKnown RBP4.42□□□□□ -1.7
HDX-201ENST00000297977 SPAG9O60271 1321 aaKnown RBP4.41□□□□□ -1.7
HDX-201ENST00000297977 PLPPR3Q6T4P5 718 aa4.41□□□□□ -1.7
HDX-201ENST00000297977 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.41□□□□□ -1.7
HDX-201ENST00000297977 UACAQ9BZF9 1416 aa4.41□□□□□ -1.7
HDX-201ENST00000297977 FHOD3Q2V2M9 1422 aa4.41□□□□□ -1.7
HDX-201ENST00000297977 PPP1R15AO75807 674 aaPredicted RBP4.41□□□□□ -1.7
HDX-201ENST00000297977 PRXQ9BXM0 1461 aa4.41□□□□□ -1.7
HDX-201ENST00000297977 WDR97A6NE52 1622 aa4.4□□□□□ -1.7
HDX-201ENST00000297977 CHIC2Q9UKJ5 165 aa4.4□□□□□ -1.7
HDX-201ENST00000297977 SCAF1Q9H7N4 1312 aaKnown RBP4.39□□□□□ -1.71
HDX-201ENST00000297977 MLECQ14165 292 aa4.39□□□□□ -1.71
HDX-201ENST00000297977 PLB1Q6P1J6 1458 aa4.38□□□□□ -1.71
HDX-201ENST00000297977 PHLDB1Q86UU1 1377 aa4.38□□□□□ -1.71
HDX-201ENST00000297977 GGT6Q6P531 493 aa4.38□□□□□ -1.71
HDX-201ENST00000297977 EFCAB5A4FU69 1503 aa4.38□□□□□ -1.71
HDX-201ENST00000297977 ANKRD30AQ9BXX3 1397 aa4.38□□□□□ -1.71
HDX-201ENST00000297977 CUL7Q14999 1698 aa4.38□□□□□ -1.71
HDX-201ENST00000297977 POGZQ7Z3K3 1410 aa4.38□□□□□ -1.71
HDX-201ENST00000297977 SLC4A1APQ9BWU0 796 aaKnown RBP4.37□□□□□ -1.71
HDX-201ENST00000297977 RUSC2Q8N2Y8 1516 aa4.37□□□□□ -1.71
HDX-201ENST00000297977 PODXL2Q9NZ53 605 aa4.37□□□□□ -1.71
HDX-201ENST00000297977 ARHGAP35Q9NRY4 1499 aa4.37□□□□□ -1.71
HDX-201ENST00000297977 TULP1O00294 542 aaPredicted RBP4.36□□□□□ -1.71
HDX-201ENST00000297977 CENPBP07199 599 aaPredicted RBP4.36□□□□□ -1.71
HDX-201ENST00000297977 IQGAP2Q13576 1575 aa4.36□□□□□ -1.71
HDX-201ENST00000297977 NUP160Q12769 1436 aa4.36□□□□□ -1.71
HDX-201ENST00000297977 PLEKHH2Q8IVE3 1493 aa4.36□□□□□ -1.71
HDX-201ENST00000297977 KIF3BO15066 747 aa4.36□□□□□ -1.71
HDX-201ENST00000297977 PRKCSHP14314 528 aaPredicted RBP4.36□□□□□ -1.71
HDX-201ENST00000297977 ZNF326Q5BKZ1 582 aaKnown RBP4.36□□□□□ -1.71
HDX-201ENST00000297977 RRP7BPQ9NSQ0 103 aa4.36□□□□□ -1.71
HDX-201ENST00000297977 C14orf37Q86TY3 774 aa4.35□□□□□ -1.71
HDX-201ENST00000297977 WASHC2CQ9Y4E1 1318 aa4.35□□□□□ -1.71
HDX-201ENST00000297977 CASKIN1Q8WXD9 1431 aa4.35□□□□□ -1.71
HDX-201ENST00000297977 HRCP23327 699 aa4.35□□□□□ -1.71
HDX-201ENST00000297977 EID1Q9Y6B2 187 aa4.35□□□□□ -1.71
HDX-201ENST00000297977 BIVM-ERCC5R4GMW8 1640 aa4.35□□□□□ -1.71
HDX-201ENST00000297977 TROQ12816 1431 aaPredicted RBP4.35□□□□□ -1.71
HDX-201ENST00000297977 TEX14Q8IWB6 1497 aa4.35□□□□□ -1.71
HDX-201ENST00000297977 CD109Q6YHK3 1445 aa4.34□□□□□ -1.71
HDX-201ENST00000297977 KIF21AQ7Z4S6 1674 aa4.34□□□□□ -1.72
HDX-201ENST00000297977 KIF21BO75037 1637 aa4.34□□□□□ -1.72
HDX-201ENST00000297977 MYOM3Q5VTT5 1437 aa4.33□□□□□ -1.72
HDX-201ENST00000297977 HNRNPMP52272 730 aaKnown RBP eCLIP4.33□□□□□ -1.72
HDX-201ENST00000297977 EIF4G3O43432 1585 aaKnown RBP4.33□□□□□ -1.72
HDX-201ENST00000297977 TONSLQ96HA7 1378 aa4.33□□□□□ -1.72
HDX-201ENST00000297977 NEUROD1Q13562 356 aa4.33□□□□□ -1.72
HDX-201ENST00000297977 HMGB1P09429 215 aaKnown RBP4.32□□□□□ -1.72
HDX-201ENST00000297977 POLR3GLQ9BT43 218 aa4.32□□□□□ -1.72
HDX-201ENST00000297977 PPP6R1Q9UPN7 881 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms