RNA–Protein interactions for RNA: ENST00000297977.9

HDX-201, Transcript of highly divergent homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDX, Length 6,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDX-201ENST00000297977 CLIP1P30622 1438 aa4.55□□□□□ -1.68
HDX-201ENST00000297977 RAPGEF2Q9Y4G8 1499 aa4.54□□□□□ -1.68
HDX-201ENST00000297977 PTPRGP23470 1445 aa4.54□□□□□ -1.68
HDX-201ENST00000297977 FAM50AQ14320 339 aaKnown RBP4.54□□□□□ -1.68
HDX-201ENST00000297977 ITGAEP38570 1179 aa4.53□□□□□ -1.68
HDX-201ENST00000297977 DNMBPQ6XZF7 1577 aa4.53□□□□□ -1.68
HDX-201ENST00000297977 AQRO60306 1485 aaKnown RBP eCLIP4.53□□□□□ -1.68
HDX-201ENST00000297977 TNIKQ9UKE5 1360 aa4.53□□□□□ -1.68
HDX-201ENST00000297977 POLA1P09884 1462 aaPredicted RBP4.53□□□□□ -1.69
HDX-201ENST00000297977 FMN1Q68DA7 1419 aa4.52□□□□□ -1.69
HDX-201ENST00000297977 IGF1RP08069 1367 aa4.52□□□□□ -1.69
HDX-201ENST00000297977 EFCAB2Q5VUJ9 269 aa4.52□□□□□ -1.69
HDX-201ENST00000297977 RAD54L2Q9Y4B4 1467 aa4.52□□□□□ -1.69
HDX-201ENST00000297977 CFDP1Q9UEE9 299 aaPredicted RBP4.51□□□□□ -1.69
HDX-201ENST00000297977 MAGI1Q96QZ7 1491 aaPredicted RBP4.51□□□□□ -1.69
HDX-201ENST00000297977 HOMEZQ8IX15 550 aa4.5□□□□□ -1.69
HDX-201ENST00000297977 ARID4BQ4LE39 1312 aaPredicted RBP4.5□□□□□ -1.69
HDX-201ENST00000297977 TRIM52Q96A61 297 aa4.49□□□□□ -1.69
HDX-201ENST00000297977 RSPH4AQ5TD94 716 aa4.49□□□□□ -1.69
HDX-201ENST00000297977 ABCA10Q8WWZ4 1543 aa4.49□□□□□ -1.69
HDX-201ENST00000297977 STAG3Q9UJ98 1225 aa4.49□□□□□ -1.69
HDX-201ENST00000297977 SYNJ2O15056 1496 aa4.48□□□□□ -1.69
HDX-201ENST00000297977 CCNB3Q8WWL7 1395 aa4.48□□□□□ -1.69
HDX-201ENST00000297977 TRIM26Q12899 539 aaPredicted RBP4.48□□□□□ -1.69
HDX-201ENST00000297977 PCGF6Q9BYE7 350 aa4.48□□□□□ -1.69
HDX-201ENST00000297977 URB2Q14146 1524 aaKnown RBP4.47□□□□□ -1.69
HDX-201ENST00000297977 CCER1Q8TC90 406 aaPredicted RBP4.47□□□□□ -1.69
HDX-201ENST00000297977 KIAA0586Q9BVV6 1533 aa4.47□□□□□ -1.69
HDX-201ENST00000297977 FAM69CQ0P6D2 419 aa4.47□□□□□ -1.69
HDX-201ENST00000297977 SNAPC4Q5SXM2 1469 aa4.47□□□□□ -1.69
HDX-201ENST00000297977 PRG4Q92954 1404 aaPredicted RBP4.47□□□□□ -1.69
HDX-201ENST00000297977 PPARGC1BQ86YN6 1023 aaKnown RBP4.46□□□□□ -1.69
HDX-201ENST00000297977 BCANQ96GW7 911 aa4.46□□□□□ -1.69
HDX-201ENST00000297977 CEP162Q5TB80 1403 aa4.46□□□□□ -1.7
HDX-201ENST00000297977 CUX1P39880 1505 aa4.45□□□□□ -1.7
HDX-201ENST00000297977 TOP2BQ02880 1626 aa4.45□□□□□ -1.7
HDX-201ENST00000297977 SYNJ1O43426 1573 aa4.45□□□□□ -1.7
HDX-201ENST00000297977 DNAJC5Q9H3Z4 198 aa4.44□□□□□ -1.7
HDX-201ENST00000297977 EIF5BO60841 1220 aaKnown RBP4.44□□□□□ -1.7
HDX-201ENST00000297977 ERICH3Q5RHP9 1530 aa4.44□□□□□ -1.7
HDX-201ENST00000297977 HDGFP51858 240 aaKnown RBP4.44□□□□□ -1.7
HDX-201ENST00000297977 WDR62O43379 1518 aa4.44□□□□□ -1.7
HDX-201ENST00000297977 AEBP2Q6ZN18 517 aaPredicted RBP4.43□□□□□ -1.7
HDX-201ENST00000297977 GRIN2AQ12879 1464 aa4.43□□□□□ -1.7
HDX-201ENST00000297977 CCDC18Q5T9S5 1454 aa4.43□□□□□ -1.7
HDX-201ENST00000297977 ZNF608Q9ULD9 1512 aaPredicted RBP4.43□□□□□ -1.7
HDX-201ENST00000297977 TIMELESSQ9UNS1 1208 aa4.43□□□□□ -1.7
HDX-201ENST00000297977 KANK1Q14678 1352 aa4.42□□□□□ -1.7
HDX-201ENST00000297977 VPS8Q8N3P4 1428 aa4.42□□□□□ -1.7
HDX-201ENST00000297977 CHGAP10645 457 aaKnown RBP4.42□□□□□ -1.7
HDX-201ENST00000297977 SPAG9O60271 1321 aaKnown RBP4.41□□□□□ -1.7
HDX-201ENST00000297977 PLPPR3Q6T4P5 718 aa4.41□□□□□ -1.7
HDX-201ENST00000297977 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.41□□□□□ -1.7
HDX-201ENST00000297977 UACAQ9BZF9 1416 aa4.41□□□□□ -1.7
HDX-201ENST00000297977 FHOD3Q2V2M9 1422 aa4.41□□□□□ -1.7
HDX-201ENST00000297977 PPP1R15AO75807 674 aaPredicted RBP4.41□□□□□ -1.7
HDX-201ENST00000297977 PRXQ9BXM0 1461 aa4.41□□□□□ -1.7
HDX-201ENST00000297977 WDR97A6NE52 1622 aa4.4□□□□□ -1.7
HDX-201ENST00000297977 CHIC2Q9UKJ5 165 aa4.4□□□□□ -1.7
HDX-201ENST00000297977 SCAF1Q9H7N4 1312 aaKnown RBP4.39□□□□□ -1.71
HDX-201ENST00000297977 MLECQ14165 292 aa4.39□□□□□ -1.71
HDX-201ENST00000297977 PLB1Q6P1J6 1458 aa4.38□□□□□ -1.71
HDX-201ENST00000297977 PHLDB1Q86UU1 1377 aa4.38□□□□□ -1.71
HDX-201ENST00000297977 GGT6Q6P531 493 aa4.38□□□□□ -1.71
HDX-201ENST00000297977 EFCAB5A4FU69 1503 aa4.38□□□□□ -1.71
HDX-201ENST00000297977 ANKRD30AQ9BXX3 1397 aa4.38□□□□□ -1.71
HDX-201ENST00000297977 CUL7Q14999 1698 aa4.38□□□□□ -1.71
HDX-201ENST00000297977 POGZQ7Z3K3 1410 aa4.38□□□□□ -1.71
HDX-201ENST00000297977 SLC4A1APQ9BWU0 796 aaKnown RBP4.37□□□□□ -1.71
HDX-201ENST00000297977 RUSC2Q8N2Y8 1516 aa4.37□□□□□ -1.71
HDX-201ENST00000297977 PODXL2Q9NZ53 605 aa4.37□□□□□ -1.71
HDX-201ENST00000297977 ARHGAP35Q9NRY4 1499 aa4.37□□□□□ -1.71
HDX-201ENST00000297977 TULP1O00294 542 aaPredicted RBP4.36□□□□□ -1.71
HDX-201ENST00000297977 CENPBP07199 599 aaPredicted RBP4.36□□□□□ -1.71
HDX-201ENST00000297977 IQGAP2Q13576 1575 aa4.36□□□□□ -1.71
HDX-201ENST00000297977 NUP160Q12769 1436 aa4.36□□□□□ -1.71
HDX-201ENST00000297977 PLEKHH2Q8IVE3 1493 aa4.36□□□□□ -1.71
HDX-201ENST00000297977 KIF3BO15066 747 aa4.36□□□□□ -1.71
HDX-201ENST00000297977 PRKCSHP14314 528 aaPredicted RBP4.36□□□□□ -1.71
HDX-201ENST00000297977 ZNF326Q5BKZ1 582 aaKnown RBP4.36□□□□□ -1.71
HDX-201ENST00000297977 RRP7BPQ9NSQ0 103 aa4.36□□□□□ -1.71
HDX-201ENST00000297977 C14orf37Q86TY3 774 aa4.35□□□□□ -1.71
HDX-201ENST00000297977 WASHC2CQ9Y4E1 1318 aa4.35□□□□□ -1.71
HDX-201ENST00000297977 CASKIN1Q8WXD9 1431 aa4.35□□□□□ -1.71
HDX-201ENST00000297977 HRCP23327 699 aa4.35□□□□□ -1.71
HDX-201ENST00000297977 EID1Q9Y6B2 187 aa4.35□□□□□ -1.71
HDX-201ENST00000297977 BIVM-ERCC5R4GMW8 1640 aa4.35□□□□□ -1.71
HDX-201ENST00000297977 TROQ12816 1431 aaPredicted RBP4.35□□□□□ -1.71
HDX-201ENST00000297977 TEX14Q8IWB6 1497 aa4.35□□□□□ -1.71
HDX-201ENST00000297977 CD109Q6YHK3 1445 aa4.34□□□□□ -1.71
HDX-201ENST00000297977 KIF21AQ7Z4S6 1674 aa4.34□□□□□ -1.72
HDX-201ENST00000297977 KIF21BO75037 1637 aa4.34□□□□□ -1.72
HDX-201ENST00000297977 MYOM3Q5VTT5 1437 aa4.33□□□□□ -1.72
HDX-201ENST00000297977 HNRNPMP52272 730 aaKnown RBP eCLIP4.33□□□□□ -1.72
HDX-201ENST00000297977 EIF4G3O43432 1585 aaKnown RBP4.33□□□□□ -1.72
HDX-201ENST00000297977 TONSLQ96HA7 1378 aa4.33□□□□□ -1.72
HDX-201ENST00000297977 NEUROD1Q13562 356 aa4.33□□□□□ -1.72
HDX-201ENST00000297977 HMGB1P09429 215 aaKnown RBP4.32□□□□□ -1.72
HDX-201ENST00000297977 POLR3GLQ9BT43 218 aa4.32□□□□□ -1.72
HDX-201ENST00000297977 PPP6R1Q9UPN7 881 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms