RNA–Protein interactions for RNA: ENST00000297977.9

HDX-201, Transcript of highly divergent homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDX, Length 6,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDX-201ENST00000297977 NISCHQ9Y2I1 1504 aa6.25□□□□□ -1.41
HDX-201ENST00000297977 DCAF8L2P0C7V8 631 aa5.81□□□□□ -1.48
HDX-201ENST00000297977 ABCC9O60706 1549 aa5.45□□□□□ -1.54
HDX-201ENST00000297977 CCDC180Q9P1Z9 1646 aa5.36□□□□□ -1.55
HDX-201ENST00000297977 SHROOM4Q9ULL8 1493 aa5.29□□□□□ -1.56
HDX-201ENST00000297977 SUPT5HO00267 1087 aaKnown RBP5.24□□□□□ -1.57
HDX-201ENST00000297977 PABPN1Q86U42 306 aaKnown RBP eCLIP5.22□□□□□ -1.57
HDX-201ENST00000297977 RB1CC1Q8TDY2 1594 aa5.22□□□□□ -1.57
HDX-201ENST00000297977 NACADO15069 1562 aa5.2□□□□□ -1.58
HDX-201ENST00000297977 SLC24A1O60721 1099 aa5.19□□□□□ -1.58
HDX-201ENST00000297977 MYT1Q01538 1121 aa5.18□□□□□ -1.58
HDX-201ENST00000297977 ZCCHC6Q5VYS8 1495 aaKnown RBP5.16□□□□□ -1.58
HDX-201ENST00000297977 FAM9AQ8IZU1 332 aaPredicted RBP5.15□□□□□ -1.59
HDX-201ENST00000297977 DCAF1Q9Y4B6 1507 aa5.13□□□□□ -1.59
HDX-201ENST00000297977 MYO15BQ96JP2 1530 aa5.13□□□□□ -1.59
HDX-201ENST00000297977 SCRIBQ14160 1630 aa5.08□□□□□ -1.6
HDX-201ENST00000297977 TTBK1Q5TCY1 1321 aaPredicted RBP5.04□□□□□ -1.6
HDX-201ENST00000297977 PELP1Q8IZL8 1130 aaKnown RBP4.98□□□□□ -1.61
HDX-201ENST00000297977 TRIM41Q8WV44 630 aa4.97□□□□□ -1.61
HDX-201ENST00000297977 APLP2Q06481 763 aa4.93□□□□□ -1.62
HDX-201ENST00000297977 BAZ1AQ9NRL2 1556 aaPredicted RBP4.93□□□□□ -1.62
HDX-201ENST00000297977 BAZ1BQ9UIG0 1483 aaKnown RBP4.91□□□□□ -1.62
HDX-201ENST00000297977 CECR2Q9BXF3 1484 aa4.9□□□□□ -1.62
HDX-201ENST00000297977 ERICH6Q7L0X2 663 aa4.89□□□□□ -1.63
HDX-201ENST00000297977 SMARCA2P51531 1590 aa4.89□□□□□ -1.63
HDX-201ENST00000297977 ERCC6Q03468 1493 aa4.88□□□□□ -1.63
HDX-201ENST00000297977 UBTFP17480 764 aaKnown RBP4.87□□□□□ -1.63
HDX-201ENST00000297977 PDS5BQ9NTI5 1447 aa4.87□□□□□ -1.63
HDX-201ENST00000297977 EHMT2Q96KQ7 1210 aa4.86□□□□□ -1.63
HDX-201ENST00000297977 RSF1Q96T23 1441 aaPredicted RBP4.85□□□□□ -1.63
HDX-201ENST00000297977 FBLN2P98095 1184 aa4.85□□□□□ -1.63
HDX-201ENST00000297977 NCAPD3P42695 1498 aa4.82□□□□□ -1.64
HDX-201ENST00000297977 ATAD2BQ9ULI0 1458 aa4.82□□□□□ -1.64
HDX-201ENST00000297977 CADPSQ9ULU8 1353 aa4.81□□□□□ -1.64
HDX-201ENST00000297977 RANGAP1P46060 587 aaPredicted RBP4.81□□□□□ -1.64
HDX-201ENST00000297977 NPM1P06748 294 aaKnown RBP eCLIP4.8□□□□□ -1.64
HDX-201ENST00000297977 ATP1B4Q9UN42 357 aaPredicted RBP4.8□□□□□ -1.64
HDX-201ENST00000297977 EIF4G1Q04637 1599 aaKnown RBP4.8□□□□□ -1.64
HDX-201ENST00000297977 CHMP7Q8WUX9 453 aaPredicted RBP4.8□□□□□ -1.64
HDX-201ENST00000297977 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.79□□□□□ -1.64
HDX-201ENST00000297977 HNRNPUL2Q1KMD3 747 aaKnown RBP4.79□□□□□ -1.64
HDX-201ENST00000297977 DAXXQ9UER7 740 aaPredicted RBP4.79□□□□□ -1.64
HDX-201ENST00000297977 CHIC1Q5VXU3 224 aa4.78□□□□□ -1.64
HDX-201ENST00000297977 MROH2BQ7Z745 1585 aa4.77□□□□□ -1.65
HDX-201ENST00000297977 CSRNP3Q8WYN3 585 aa4.76□□□□□ -1.65
HDX-201ENST00000297977 DNAJC5BQ9UF47 199 aa4.75□□□□□ -1.65
HDX-201ENST00000297977 ABCC8Q09428 1581 aa4.75□□□□□ -1.65
HDX-201ENST00000297977 CDK11AQ9UQ88 783 aaPredicted RBP4.75□□□□□ -1.65
HDX-201ENST00000297977 SMARCA4P51532 1647 aa4.75□□□□□ -1.65
HDX-201ENST00000297977 WRNQ14191 1432 aaPredicted RBP eCLIP4.74□□□□□ -1.65
HDX-201ENST00000297977 BICRAQ9NZM4 1560 aa4.74□□□□□ -1.65
HDX-201ENST00000297977 ACIN1Q9UKV3 1341 aaKnown RBP4.73□□□□□ -1.65
HDX-201ENST00000297977 HMGXB3Q12766 1538 aa4.72□□□□□ -1.65
HDX-201ENST00000297977 CEP164Q9UPV0 1460 aa4.72□□□□□ -1.65
HDX-201ENST00000297977 MYT1LQ9UL68 1186 aa4.72□□□□□ -1.65
HDX-201ENST00000297977 CC2D2AQ9P2K1 1620 aa4.72□□□□□ -1.65
HDX-201ENST00000297977 TOP2AP11388 1531 aaKnown RBP4.72□□□□□ -1.65
HDX-201ENST00000297977 EEA1Q15075 1411 aa4.72□□□□□ -1.65
HDX-201ENST00000297977 KIF27Q86VH2 1401 aa4.71□□□□□ -1.65
HDX-201ENST00000297977 ZEB1P37275 1124 aaPredicted RBP4.71□□□□□ -1.65
HDX-201ENST00000297977 AMER1Q5JTC6 1135 aaPredicted RBP4.7□□□□□ -1.66
HDX-201ENST00000297977 OSCARQ8IYS5 282 aa4.7□□□□□ -1.66
HDX-201ENST00000297977 CCDC88BA6NC98 1476 aa4.7□□□□□ -1.66
HDX-201ENST00000297977 FANCD2Q9BXW9 1451 aa4.69□□□□□ -1.66
HDX-201ENST00000297977 SOGA1O94964 1423 aa4.68□□□□□ -1.66
HDX-201ENST00000297977 CFTRP13569 1480 aa4.66□□□□□ -1.66
HDX-201ENST00000297977 CUX2O14529 1486 aa4.65□□□□□ -1.67
HDX-201ENST00000297977 TDRD9Q8NDG6 1382 aaKnown RBP4.65□□□□□ -1.67
HDX-201ENST00000297977 MRC2Q9UBG0 1479 aa4.64□□□□□ -1.67
HDX-201ENST00000297977 CARMIL2Q6F5E8 1435 aa4.64□□□□□ -1.67
HDX-201ENST00000297977 NCBP3Q53F19 620 aaKnown RBP4.63□□□□□ -1.67
HDX-201ENST00000297977 LAMC3Q9Y6N6 1575 aa4.63□□□□□ -1.67
HDX-201ENST00000297977 CARMIL1Q5VZK9 1371 aa4.63□□□□□ -1.67
HDX-201ENST00000297977 WIZO95785 1651 aa4.63□□□□□ -1.67
HDX-201ENST00000297977 PLEKHD1A6NEE1 506 aa4.63□□□□□ -1.67
HDX-201ENST00000297977 ESF1Q9H501 851 aaKnown RBP4.63□□□□□ -1.67
HDX-201ENST00000297977 PEG3Q9GZU2 1588 aa4.62□□□□□ -1.67
HDX-201ENST00000297977 TRHP20396 242 aaPredicted RBP4.61□□□□□ -1.67
HDX-201ENST00000297977 P3H3Q8IVL6 736 aa4.61□□□□□ -1.67
HDX-201ENST00000297977 IFT140Q96RY7 1462 aa4.61□□□□□ -1.67
HDX-201ENST00000297977 JPH4Q96JJ6 628 aa4.59□□□□□ -1.67
HDX-201ENST00000297977 NESP48681 1621 aa4.59□□□□□ -1.67
HDX-201ENST00000297977 GRIN2BQ13224 1484 aa4.58□□□□□ -1.68
HDX-201ENST00000297977 GAPVD1Q14C86 1478 aa4.57□□□□□ -1.68
HDX-201ENST00000297977 TSPY4P0CV99 314 aa4.57□□□□□ -1.68
HDX-201ENST00000297977 TSPY10P0CW01 314 aa4.57□□□□□ -1.68
HDX-201ENST00000297977 GOLGA3Q08378 1498 aa4.57□□□□□ -1.68
HDX-201ENST00000297977 CYB5RLQ6IPT4 315 aa4.57□□□□□ -1.68
HDX-201ENST00000297977 LOC105371045A0A1W2PR82 267 aa4.57□□□□□ -1.68
HDX-201ENST00000297977 UNC13AQ9UPW8 1703 aa4.56□□□□□ -1.68
HDX-201ENST00000297977 FGD5Q6ZNL6 1462 aa4.56□□□□□ -1.68
HDX-201ENST00000297977 ARID3CA6NKF2 412 aa4.56□□□□□ -1.68
HDX-201ENST00000297977 ARXQ96QS3 562 aa4.56□□□□□ -1.68
HDX-201ENST00000297977 MTUS2Q5JR59 1369 aa4.56□□□□□ -1.68
HDX-201ENST00000297977 FHAD1B1AJZ9 1412 aa4.56□□□□□ -1.68
HDX-201ENST00000297977 KCNH8Q96L42 1107 aa4.56□□□□□ -1.68
HDX-201ENST00000297977 TOPBP1Q92547 1522 aa4.55□□□□□ -1.68
HDX-201ENST00000297977 RTN4Q9NQC3 1192 aaKnown RBP4.55□□□□□ -1.68
HDX-201ENST00000297977 ZNF777Q9ULD5 760 aaPredicted RBP4.55□□□□□ -1.68
HDX-201ENST00000297977 CLSPNQ9HAW4 1339 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms