RNA–Protein interactions for RNA: ENST00000296930.9

NPM1-201, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-201ENST00000296930 RUSC2Q8N2Y8 1516 aa28.27■■■□□ 2.12
NPM1-201ENST00000296930 JPH4Q96JJ6 628 aa28.27■■■□□ 2.12
NPM1-201ENST00000296930 PRG4Q92954 1404 aaPredicted RBP28.25■■■□□ 2.11
NPM1-201ENST00000296930 KIAA0586Q9BVV6 1533 aa28.16■■■□□ 2.1
NPM1-201ENST00000296930 CARMIL1Q5VZK9 1371 aa28.13■■■□□ 2.09
NPM1-201ENST00000296930 IQGAP2Q13576 1575 aa27.93■■■□□ 2.06
NPM1-201ENST00000296930 RAPGEF2Q9Y4G8 1499 aa27.92■■■□□ 2.06
NPM1-201ENST00000296930 NPM1P06748 294 aaKnown RBP eCLIP27.91■■■□□ 2.06
NPM1-201ENST00000296930 ADCY10Q96PN6 1610 aa27.91■■■□□ 2.06
NPM1-201ENST00000296930 KIF13AQ9H1H9 1805 aa27.89■■■□□ 2.05
NPM1-201ENST00000296930 CARMIL2Q6F5E8 1435 aa27.89■■■□□ 2.05
NPM1-201ENST00000296930 PTPRGP23470 1445 aa27.85■■■□□ 2.05
NPM1-201ENST00000296930 MAPKBP1O60336 1514 aa27.85■■■□□ 2.05
NPM1-201ENST00000296930 TNIKQ9UKE5 1360 aa27.83■■■□□ 2.05
NPM1-201ENST00000296930 ABCC10Q5T3U5 1492 aa27.79■■■□□ 2.04
NPM1-201ENST00000296930 TTBK1Q5TCY1 1321 aaPredicted RBP27.75■■■□□ 2.03
NPM1-201ENST00000296930 DISP1Q96F81 1524 aa27.75■■■□□ 2.03
NPM1-201ENST00000296930 UGGT2Q9NYU1 1516 aa27.75■■■□□ 2.03
NPM1-201ENST00000296930 FAM69CQ0P6D2 419 aa27.73■■■□□ 2.03
NPM1-201ENST00000296930 DIP2BQ9P265 1576 aa27.72■■■□□ 2.03
NPM1-201ENST00000296930 CTTNBP2Q8WZ74 1663 aa27.71■■■□□ 2.03
NPM1-201ENST00000296930 ABCC2Q92887 1545 aa27.68■■■□□ 2.02
NPM1-201ENST00000296930 PRXQ9BXM0 1461 aa27.67■■■□□ 2.02
NPM1-201ENST00000296930 UHRF1BP1LA0JNW5 1464 aa27.66■■■□□ 2.02
NPM1-201ENST00000296930 KIAA0556O60303 1618 aa27.66■■■□□ 2.02
NPM1-201ENST00000296930 UACAQ9BZF9 1416 aa27.65■■■□□ 2.02
NPM1-201ENST00000296930 GOLGA3Q08378 1498 aa27.57■■■□□ 2
NPM1-201ENST00000296930 PLB1Q6P1J6 1458 aa27.56■■■□□ 2
NPM1-201ENST00000296930 ASXL2Q76L83 1435 aa27.55■■■□□ 2
NPM1-201ENST00000296930 TSPOAP1O95153 1857 aa27.53■■■□□ 2
NPM1-201ENST00000296930 KDM5BQ9UGL1 1544 aa27.53■■■□□ 2
NPM1-201ENST00000296930 CSRNP3Q8WYN3 585 aa27.51■■□□□ 1.99
NPM1-201ENST00000296930 ZCCHC11Q5TAX3 1644 aaKnown RBP27.48■■□□□ 1.99
NPM1-201ENST00000296930 GLI2P10070 1586 aa27.47■■□□□ 1.99
NPM1-201ENST00000296930 EEA1Q15075 1411 aa27.47■■□□□ 1.99
NPM1-201ENST00000296930 KDM6BO15054 1643 aa27.44■■□□□ 1.98
NPM1-201ENST00000296930 ABCA8O94911 1581 aa27.39■■□□□ 1.98
NPM1-201ENST00000296930 EPRSP07814 1512 aaKnown RBP27.39■■□□□ 1.98
NPM1-201ENST00000296930 PPRC1Q5VV67 1664 aaKnown RBP27.36■■□□□ 1.97
NPM1-201ENST00000296930 FAM9AQ8IZU1 332 aaPredicted RBP27.34■■□□□ 1.97
NPM1-201ENST00000296930 MAP3K4Q9Y6R4 1608 aa27.33■■□□□ 1.97
NPM1-201ENST00000296930 WDR7Q9Y4E6 1490 aa27.33■■□□□ 1.97
NPM1-201ENST00000296930 SAMD9Q5K651 1589 aa27.3■■□□□ 1.96
NPM1-201ENST00000296930 P3H3Q8IVL6 736 aa27.29■■□□□ 1.96
NPM1-201ENST00000296930 TEX14Q8IWB6 1497 aa27.25■■□□□ 1.95
NPM1-201ENST00000296930 KIF21BO75037 1637 aa27.23■■□□□ 1.95
NPM1-201ENST00000296930 CFAP43Q8NDM7 1665 aa27.18■■□□□ 1.94
NPM1-201ENST00000296930 CHIC1Q5VXU3 224 aa27.17■■□□□ 1.94
NPM1-201ENST00000296930 KCNH8Q96L42 1107 aa27.17■■□□□ 1.94
NPM1-201ENST00000296930 ATP10BO94823 1461 aa27.16■■□□□ 1.94
NPM1-201ENST00000296930 RAPGEF6Q8TEU7 1601 aa27.15■■□□□ 1.94
NPM1-201ENST00000296930 CD109Q6YHK3 1445 aa27.13■■□□□ 1.93
NPM1-201ENST00000296930 RANGAP1P46060 587 aaPredicted RBP27.13■■□□□ 1.93
NPM1-201ENST00000296930 COL17A1Q9UMD9 1497 aaPredicted RBP27.13■■□□□ 1.93
NPM1-201ENST00000296930 ARID3CA6NKF2 412 aa27.12■■□□□ 1.93
NPM1-201ENST00000296930 MAGI3Q5TCQ9 1506 aa27.12■■□□□ 1.93
NPM1-201ENST00000296930 FHOD3Q2V2M9 1422 aa27.09■■□□□ 1.93
NPM1-201ENST00000296930 EFCAB5A4FU69 1503 aa27.09■■□□□ 1.93
NPM1-201ENST00000296930 NUP153P49790 1475 aaKnown RBP27.03■■□□□ 1.92
NPM1-201ENST00000296930 KDM4FA0A1W2PPD8 638 aa27.02■■□□□ 1.92
NPM1-201ENST00000296930 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.01■■□□□ 1.91
NPM1-201ENST00000296930 HNRNPUL2Q1KMD3 747 aaKnown RBP27.01■■□□□ 1.91
NPM1-201ENST00000296930 ABCA9Q8IUA7 1624 aa27■■□□□ 1.91
NPM1-201ENST00000296930 UBTFP17480 764 aaKnown RBP26.99■■□□□ 1.91
NPM1-201ENST00000296930 EHMT2Q96KQ7 1210 aa26.95■■□□□ 1.9
NPM1-201ENST00000296930 ARAP3Q8WWN8 1544 aa26.9■■□□□ 1.9
NPM1-201ENST00000296930 PHLDB1Q86UU1 1377 aa26.9■■□□□ 1.9
NPM1-201ENST00000296930 PLEKHD1A6NEE1 506 aa26.89■■□□□ 1.9
NPM1-201ENST00000296930 ADGRL1O94910 1474 aa26.89■■□□□ 1.89
NPM1-201ENST00000296930 FMN1Q68DA7 1419 aa26.84■■□□□ 1.89
NPM1-201ENST00000296930 NEO1Q92859 1461 aa26.84■■□□□ 1.89
NPM1-201ENST00000296930 ARHGAP35Q9NRY4 1499 aa26.84■■□□□ 1.89
NPM1-201ENST00000296930 CDK13Q14004 1512 aaKnown RBP26.78■■□□□ 1.88
NPM1-201ENST00000296930 HECW1Q76N89 1606 aa26.78■■□□□ 1.88
NPM1-201ENST00000296930 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.75■■□□□ 1.875e-17■□□□□ 10.1
NPM1-201ENST00000296930 ATP1B4Q9UN42 357 aaPredicted RBP26.73■■□□□ 1.87
NPM1-201ENST00000296930 RAPGEF3O95398 923 aa26.71■■□□□ 1.87
NPM1-201ENST00000296930 TTC37Q6PGP7 1564 aa26.71■■□□□ 1.87
NPM1-201ENST00000296930 CFAP74Q9C0B2 1584 aa26.71■■□□□ 1.87
NPM1-201ENST00000296930 FANCAO15360 1455 aa26.69■■□□□ 1.86
NPM1-201ENST00000296930 FRMPD1Q5SYB0 1578 aa26.67■■□□□ 1.86
NPM1-201ENST00000296930 CDK11AQ9UQ88 783 aaPredicted RBP26.67■■□□□ 1.86
NPM1-201ENST00000296930 AKNAQ7Z591 1439 aa26.66■■□□□ 1.86
NPM1-201ENST00000296930 DENND4BO75064 1496 aaPredicted RBP26.64■■□□□ 1.85
NPM1-201ENST00000296930 RICTORQ6R327 1708 aa26.62■■□□□ 1.85
NPM1-201ENST00000296930 LRRIQ1Q96JM4 1722 aa26.6■■□□□ 1.85
NPM1-201ENST00000296930 PLCH2O75038 1416 aa26.59■■□□□ 1.85
NPM1-201ENST00000296930 MYO5CQ9NQX4 1742 aa26.57■■□□□ 1.84
NPM1-201ENST00000296930 TROQ12816 1431 aaPredicted RBP26.57■■□□□ 1.84
NPM1-201ENST00000296930 KIF14Q15058 1648 aa26.57■■□□□ 1.84
NPM1-201ENST00000296930 CASKIN1Q8WXD9 1431 aa26.56■■□□□ 1.84
NPM1-201ENST00000296930 CLIP1P30622 1438 aa26.55■■□□□ 1.84
NPM1-201ENST00000296930 PCF11O94913 1555 aaKnown RBP26.55■■□□□ 1.84
NPM1-201ENST00000296930 ARHGEF40Q8TER5 1519 aa26.54■■□□□ 1.84
NPM1-201ENST00000296930 CCDC18Q5T9S5 1454 aa26.53■■□□□ 1.84
NPM1-201ENST00000296930 ZMYM4Q5VZL5 1548 aa26.52■■□□□ 1.84
NPM1-201ENST00000296930 ADAMTSL3P82987 1691 aa26.51■■□□□ 1.83
NPM1-201ENST00000296930 EFCAB2Q5VUJ9 269 aa26.5■■□□□ 1.83
NPM1-201ENST00000296930 SCAPERQ9BY12 1400 aa26.49■■□□□ 1.83
NPM1-201ENST00000296930 BCORL1Q5H9F3 1711 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms