RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 GOLGA3Q08378 1498 aa37.03■■■■□ 3.52
LINC01116-201ENST00000295549 JPH4Q96JJ6 628 aa37■■■■□ 3.51
LINC01116-201ENST00000295549 IQGAP2Q13576 1575 aa36.94■■■■□ 3.5
LINC01116-201ENST00000295549 SHROOM2Q13796 1616 aa36.93■■■■□ 3.5
LINC01116-201ENST00000295549 EHMT2Q96KQ7 1210 aa36.93■■■■□ 3.5
LINC01116-201ENST00000295549 UBTFP17480 764 aaKnown RBP36.92■■■■□ 3.5
LINC01116-201ENST00000295549 CTTNBP2Q8WZ74 1663 aa36.89■■■■□ 3.5
LINC01116-201ENST00000295549 ARHGEF11O15085 1522 aa36.83■■■■□ 3.49
LINC01116-201ENST00000295549 PRG4Q92954 1404 aaPredicted RBP36.83■■■■□ 3.49
LINC01116-201ENST00000295549 UGGT2Q9NYU1 1516 aa36.8■■■■□ 3.48
LINC01116-201ENST00000295549 RIMBP3CA6NJZ7 1639 aa36.73■■■■□ 3.47
LINC01116-201ENST00000295549 RIMBP3BA6NNM3 1639 aa36.73■■■■□ 3.47
LINC01116-201ENST00000295549 RIMBP3Q9UFD9 1639 aa36.73■■■■□ 3.47
LINC01116-201ENST00000295549 ERCC6L2Q5T890 1561 aa36.72■■■■□ 3.47
LINC01116-201ENST00000295549 CARMIL2Q6F5E8 1435 aa36.71■■■■□ 3.47
LINC01116-201ENST00000295549 TNIKQ9UKE5 1360 aa36.71■■■■□ 3.47
LINC01116-201ENST00000295549 LOC105371045A0A1W2PR82 267 aa36.69■■■■□ 3.46
LINC01116-201ENST00000295549 DISP1Q96F81 1524 aa36.68■■■■□ 3.46
LINC01116-201ENST00000295549 ARAP1Q96P48 1450 aa36.58■■■■□ 3.45
LINC01116-201ENST00000295549 RANGAP1P46060 587 aaPredicted RBP36.58■■■■□ 3.45
LINC01116-201ENST00000295549 KIAA0556O60303 1618 aa36.58■■■■□ 3.45
LINC01116-201ENST00000295549 SAMD9Q5K651 1589 aa36.53■■■■□ 3.44
LINC01116-201ENST00000295549 CYB5RLQ6IPT4 315 aa36.51■■■■□ 3.44
LINC01116-201ENST00000295549 EFCAB5A4FU69 1503 aa36.5■■■■□ 3.43
LINC01116-201ENST00000295549 PTPRGP23470 1445 aa36.49■■■■□ 3.43
LINC01116-201ENST00000295549 P3H3Q8IVL6 736 aa36.46■■■■□ 3.43
LINC01116-201ENST00000295549 ARHGAP35Q9NRY4 1499 aa36.42■■■■□ 3.42
LINC01116-201ENST00000295549 CLIP1P30622 1438 aa36.39■■■■□ 3.42
LINC01116-201ENST00000295549 TTBK1Q5TCY1 1321 aaPredicted RBP36.38■■■■□ 3.41
LINC01116-201ENST00000295549 FHOD3Q2V2M9 1422 aa36.36■■■■□ 3.41
LINC01116-201ENST00000295549 CEP162Q5TB80 1403 aa36.36■■■■□ 3.41
LINC01116-201ENST00000295549 UACAQ9BZF9 1416 aa36.26■■■■□ 3.39
LINC01116-201ENST00000295549 UHRF1BP1LA0JNW5 1464 aa36.2■■■■□ 3.38
LINC01116-201ENST00000295549 PLB1Q6P1J6 1458 aa36.2■■■■□ 3.38
LINC01116-201ENST00000295549 FMN1Q68DA7 1419 aa36.19■■■■□ 3.38
LINC01116-201ENST00000295549 ABCA8O94911 1581 aa36.16■■■■□ 3.38
LINC01116-201ENST00000295549 ABCC2Q92887 1545 aa36.15■■■■□ 3.38
LINC01116-201ENST00000295549 ADCY10Q96PN6 1610 aa36.13■■■■□ 3.37
LINC01116-201ENST00000295549 NPM1P06748 294 aaKnown RBP eCLIP36.05■■■■□ 3.36
LINC01116-201ENST00000295549 RAPGEF6Q8TEU7 1601 aa36.04■■■■□ 3.36
LINC01116-201ENST00000295549 KDM5BQ9UGL1 1544 aa36.01■■■■□ 3.36
LINC01116-201ENST00000295549 NUP153P49790 1475 aaKnown RBP35.98■■■■□ 3.35
LINC01116-201ENST00000295549 CASKIN1Q8WXD9 1431 aa35.97■■■■□ 3.35
LINC01116-201ENST00000295549 ATP10BO94823 1461 aa35.9■■■■□ 3.34
LINC01116-201ENST00000295549 VPS8Q8N3P4 1428 aa35.9■■■■□ 3.34
LINC01116-201ENST00000295549 ATP1B4Q9UN42 357 aaPredicted RBP35.89■■■■□ 3.34
LINC01116-201ENST00000295549 FYCO1Q9BQS8 1478 aa35.89■■■■□ 3.34
LINC01116-201ENST00000295549 HECW1Q76N89 1606 aa35.88■■■■□ 3.33
LINC01116-201ENST00000295549 ARID3CA6NKF2 412 aa35.87■■■■□ 3.33
LINC01116-201ENST00000295549 PCF11O94913 1555 aaKnown RBP35.87■■■■□ 3.33
LINC01116-201ENST00000295549 ZCCHC11Q5TAX3 1644 aaKnown RBP35.85■■■■□ 3.33
LINC01116-201ENST00000295549 MAPKBP1O60336 1514 aa35.85■■■■□ 3.33
LINC01116-201ENST00000295549 EPRSP07814 1512 aaKnown RBP35.82■■■■□ 3.32
LINC01116-201ENST00000295549 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.79■■■■□ 3.32
LINC01116-201ENST00000295549 HNRNPUL2Q1KMD3 747 aaKnown RBP35.79■■■■□ 3.32
LINC01116-201ENST00000295549 ASXL2Q76L83 1435 aa35.78■■■■□ 3.32
LINC01116-201ENST00000295549 CCDC18Q5T9S5 1454 aa35.75■■■■□ 3.31
LINC01116-201ENST00000295549 CDK13Q14004 1512 aaKnown RBP35.74■■■■□ 3.31
LINC01116-201ENST00000295549 WDR7Q9Y4E6 1490 aa35.69■■■■□ 3.3
LINC01116-201ENST00000295549 PLEKHD1A6NEE1 506 aa35.69■■■■□ 3.3
LINC01116-201ENST00000295549 CDK11AQ9UQ88 783 aaPredicted RBP35.68■■■■□ 3.3
LINC01116-201ENST00000295549 LRRIQ1Q96JM4 1722 aa35.66■■■■□ 3.3
LINC01116-201ENST00000295549 ABCC10Q5T3U5 1492 aa35.63■■■■□ 3.29
LINC01116-201ENST00000295549 KCNH8Q96L42 1107 aa35.56■■■■□ 3.28
LINC01116-201ENST00000295549 TRHP20396 242 aaPredicted RBP35.55■■■■□ 3.28
LINC01116-201ENST00000295549 FAM69CQ0P6D2 419 aa35.55■■■■□ 3.28
LINC01116-201ENST00000295549 MAP3K1Q13233 1512 aa35.53■■■■□ 3.28
LINC01116-201ENST00000295549 TROQ12816 1431 aaPredicted RBP35.52■■■■□ 3.28
LINC01116-201ENST00000295549 DIP2BQ9P265 1576 aa35.52■■■■□ 3.28
LINC01116-201ENST00000295549 APLP2Q06481 763 aa35.5■■■■□ 3.27
LINC01116-201ENST00000295549 GLI2P10070 1586 aa35.48■■■■□ 3.27
LINC01116-201ENST00000295549 TIAM1Q13009 1591 aa35.48■■■■□ 3.27
LINC01116-201ENST00000295549 MAGI3Q5TCQ9 1506 aa35.47■■■■□ 3.27
LINC01116-201ENST00000295549 MTUS2Q5JR59 1369 aa35.44■■■■□ 3.26
LINC01116-201ENST00000295549 CFAP43Q8NDM7 1665 aa35.44■■■■□ 3.26
LINC01116-201ENST00000295549 KIF13AQ9H1H9 1805 aa35.41■■■■□ 3.26
LINC01116-201ENST00000295549 LRRC9Q6ZRR7 1453 aa35.38■■■■□ 3.25
LINC01116-201ENST00000295549 KANK4Q5T7N3 995 aaPredicted RBP35.36■■■■□ 3.25
LINC01116-201ENST00000295549 EHBP1L1Q8N3D4 1523 aa35.35■■■■□ 3.25
LINC01116-201ENST00000295549 ABCA9Q8IUA7 1624 aa35.34■■■■□ 3.25
LINC01116-201ENST00000295549 KIF14Q15058 1648 aa35.33■■■■□ 3.25
LINC01116-201ENST00000295549 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.33■■■■□ 3.25
LINC01116-201ENST00000295549 CD109Q6YHK3 1445 aa35.32■■■■□ 3.24
LINC01116-201ENST00000295549 MAP3K4Q9Y6R4 1608 aa35.3■■■■□ 3.24
LINC01116-201ENST00000295549 TTC37Q6PGP7 1564 aa35.25■■■■□ 3.23
LINC01116-201ENST00000295549 PLCH2O75038 1416 aa35.18■■■■□ 3.22
LINC01116-201ENST00000295549 NCOA2Q15596 1464 aa35.18■■■■□ 3.22
LINC01116-201ENST00000295549 SUPT6HQ7KZ85 1726 aaKnown RBP35.16■■■■□ 3.22
LINC01116-201ENST00000295549 TEX14Q8IWB6 1497 aa35.15■■■■□ 3.22
LINC01116-201ENST00000295549 CCNB3Q8WWL7 1395 aa35.14■■■■□ 3.22
LINC01116-201ENST00000295549 PPRC1Q5VV67 1664 aaKnown RBP35.12■■■■□ 3.21
LINC01116-201ENST00000295549 ARAP3Q8WWN8 1544 aa35.12■■■■□ 3.21
LINC01116-201ENST00000295549 GPATCH8Q9UKJ3 1502 aaKnown RBP35.11■■■■□ 3.21
LINC01116-201ENST00000295549 TSPOAP1O95153 1857 aa35.11■■■■□ 3.21
LINC01116-201ENST00000295549 MYO5CQ9NQX4 1742 aa35.07■■■■□ 3.2
LINC01116-201ENST00000295549 EFCAB2Q5VUJ9 269 aa35.06■■■■□ 3.2
LINC01116-201ENST00000295549 FANCAO15360 1455 aa35.05■■■■□ 3.2
LINC01116-201ENST00000295549 PHLDB1Q86UU1 1377 aa35.05■■■■□ 3.2
LINC01116-201ENST00000295549 NEO1Q92859 1461 aa35.04■■■■□ 3.2
LINC01116-201ENST00000295549 PREX2Q70Z35 1606 aa35.02■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms