RNA–Protein interactions for RNA: ENST00000290894.12

SHF-201, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SHF, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-201ENST00000290894 CTTNBP2Q8WZ74 1663 aa28.6■■■□□ 2.17
SHF-201ENST00000290894 ITGAEP38570 1179 aa28.59■■■□□ 2.17
SHF-201ENST00000290894 TIAM1Q13009 1591 aa28.58■■■□□ 2.17
SHF-201ENST00000290894 PCF11O94913 1555 aaKnown RBP28.57■■■□□ 2.16
SHF-201ENST00000290894 AQRO60306 1485 aaKnown RBP eCLIP28.57■■■□□ 2.163e-9■■■■■ 36.3
SHF-201ENST00000290894 MRC2Q9UBG0 1479 aa28.56■■■□□ 2.16
SHF-201ENST00000290894 FHAD1B1AJZ9 1412 aa28.55■■■□□ 2.16
SHF-201ENST00000290894 RRBP1Q9P2E9 1410 aaKnown RBP28.53■■■□□ 2.16
SHF-201ENST00000290894 CCNB3Q8WWL7 1395 aa28.51■■■□□ 2.15
SHF-201ENST00000290894 LRRC9Q6ZRR7 1453 aa28.48■■■□□ 2.15
SHF-201ENST00000290894 EFCAB5A4FU69 1503 aa28.47■■■□□ 2.15
SHF-201ENST00000290894 MAP3K1Q13233 1512 aa28.42■■■□□ 2.14
SHF-201ENST00000290894 PBRM1Q86U86 1689 aa28.42■■■□□ 2.14
SHF-201ENST00000290894 ZNF608Q9ULD9 1512 aaPredicted RBP28.42■■■□□ 2.14
SHF-201ENST00000290894 PHLDB1Q86UU1 1377 aa28.41■■■□□ 2.14
SHF-201ENST00000290894 CFAP43Q8NDM7 1665 aa28.38■■■□□ 2.13
SHF-201ENST00000290894 CASKIN1Q8WXD9 1431 aa28.38■■■□□ 2.13
SHF-201ENST00000290894 ERCC6Q03468 1493 aa28.38■■■□□ 2.13
SHF-201ENST00000290894 FYCO1Q9BQS8 1478 aa28.38■■■□□ 2.13
SHF-201ENST00000290894 FAM50AQ14320 339 aaKnown RBP28.35■■■□□ 2.13
SHF-201ENST00000290894 FMN1Q68DA7 1419 aa28.34■■■□□ 2.13
SHF-201ENST00000290894 WDR62O43379 1518 aa28.32■■■□□ 2.12
SHF-201ENST00000290894 SAMD9Q5K651 1589 aa28.32■■■□□ 2.12
SHF-201ENST00000290894 DHX57Q6P158 1386 aaKnown RBP28.31■■■□□ 2.12
SHF-201ENST00000290894 GRIN2BQ13224 1484 aa28.3■■■□□ 2.12
SHF-201ENST00000290894 SNAPC4Q5SXM2 1469 aa28.3■■■□□ 2.12
SHF-201ENST00000290894 ADAMTS12P58397 1594 aa28.29■■■□□ 2.12
SHF-201ENST00000290894 IFT140Q96RY7 1462 aa28.28■■■□□ 2.12
SHF-201ENST00000290894 DIEXFQ68CQ4 756 aaKnown RBP28.24■■■□□ 2.11
SHF-201ENST00000290894 LRRIQ1Q96JM4 1722 aa28.21■■■□□ 2.11
SHF-201ENST00000290894 MTUS2Q5JR59 1369 aa28.19■■■□□ 2.1
SHF-201ENST00000290894 IQGAP2Q13576 1575 aa28.18■■■□□ 2.1
SHF-201ENST00000290894 ARID3CA6NKF2 412 aa28.18■■■□□ 2.1
SHF-201ENST00000290894 ZNF316A6NFI3 1004 aaPredicted RBP28.18■■■□□ 2.1
SHF-201ENST00000290894 RAB3GAP2Q9H2M9 1393 aa28.17■■■□□ 2.1
SHF-201ENST00000290894 EIF4G3O43432 1585 aaKnown RBP28.16■■■□□ 2.1
SHF-201ENST00000290894 THOC2Q8NI27 1593 aaKnown RBP28.12■■■□□ 2.09
SHF-201ENST00000290894 FBLN2P98095 1184 aa28.1■■■□□ 2.09
SHF-201ENST00000290894 CLSPNQ9HAW4 1339 aa28.07■■■□□ 2.08
SHF-201ENST00000290894 SETD5Q9C0A6 1442 aa28.05■■■□□ 2.08
SHF-201ENST00000290894 FGD6Q6ZV73 1430 aa28.03■■■□□ 2.08
SHF-201ENST00000290894 GRIN2AQ12879 1464 aa28.02■■■□□ 2.08
SHF-201ENST00000290894 CHMP7Q8WUX9 453 aaPredicted RBP28.01■■■□□ 2.08
SHF-201ENST00000290894 NCOA2Q15596 1464 aa28.01■■■□□ 2.08
SHF-201ENST00000290894 MAGI3Q5TCQ9 1506 aa28■■■□□ 2.07
SHF-201ENST00000290894 CDK13Q14004 1512 aaKnown RBP27.97■■■□□ 2.07
SHF-201ENST00000290894 KIAA0586Q9BVV6 1533 aa27.96■■■□□ 2.07
SHF-201ENST00000290894 UGGT2Q9NYU1 1516 aa27.96■■■□□ 2.07
SHF-201ENST00000290894 HECW1Q76N89 1606 aa27.93■■■□□ 2.06
SHF-201ENST00000290894 EPRSP07814 1512 aaKnown RBP27.93■■■□□ 2.06
SHF-201ENST00000290894 SUPT6HQ7KZ85 1726 aaKnown RBP27.93■■■□□ 2.06
SHF-201ENST00000290894 EHBP1L1Q8N3D4 1523 aa27.93■■■□□ 2.06
SHF-201ENST00000290894 DISP1Q96F81 1524 aa27.92■■■□□ 2.06
SHF-201ENST00000290894 MAPKBP1O60336 1514 aa27.91■■■□□ 2.06
SHF-201ENST00000290894 MYOM3Q5VTT5 1437 aa27.91■■■□□ 2.06
SHF-201ENST00000290894 CCDC18Q5T9S5 1454 aa27.91■■■□□ 2.06
SHF-201ENST00000290894 MAGI1Q96QZ7 1491 aaPredicted RBP27.9■■■□□ 2.06
SHF-201ENST00000290894 PTPRKQ15262 1439 aa27.89■■■□□ 2.06
SHF-201ENST00000290894 KIAA0556O60303 1618 aa27.88■■■□□ 2.05
SHF-201ENST00000290894 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.88■■■□□ 2.05
SHF-201ENST00000290894 SYNJ2O15056 1496 aa27.87■■■□□ 2.05
SHF-201ENST00000290894 CEP170Q5SW79 1584 aa27.86■■■□□ 2.05
SHF-201ENST00000290894 SIN3AQ96ST3 1273 aa27.85■■■□□ 2.05
SHF-201ENST00000290894 NEUROD1Q13562 356 aa27.84■■■□□ 2.05
SHF-201ENST00000290894 CHIC2Q9UKJ5 165 aa27.79■■■□□ 2.04
SHF-201ENST00000290894 PTPN23Q9H3S7 1636 aa27.79■■■□□ 2.04
SHF-201ENST00000290894 ARHGEF11O15085 1522 aa27.78■■■□□ 2.04
SHF-201ENST00000290894 NUP153P49790 1475 aaKnown RBP27.76■■■□□ 2.03
SHF-201ENST00000290894 JPH4Q96JJ6 628 aa27.75■■■□□ 2.03
SHF-201ENST00000290894 MIER1Q8N108 512 aa27.74■■■□□ 2.03
SHF-201ENST00000290894 RRP7BPQ9NSQ0 103 aa27.73■■■□□ 2.03
SHF-201ENST00000290894 RAPGEF6Q8TEU7 1601 aa27.71■■■□□ 2.03
SHF-201ENST00000290894 PLB1Q6P1J6 1458 aa27.71■■■□□ 2.03
SHF-201ENST00000290894 HFM1A2PYH4 1435 aa27.7■■■□□ 2.02
SHF-201ENST00000290894 NUP160Q12769 1436 aa27.68■■■□□ 2.02
SHF-201ENST00000290894 NAIPQ13075 1403 aa27.68■■■□□ 2.02
SHF-201ENST00000290894 YTHDC1Q96MU7 727 aaKnown RBP27.63■■■□□ 2.01
SHF-201ENST00000290894 ZNF644Q9H582 1327 aaPredicted RBP27.62■■■□□ 2.01
SHF-201ENST00000290894 CARMIL2Q6F5E8 1435 aa27.61■■■□□ 2.01
SHF-201ENST00000290894 PRG4Q92954 1404 aaPredicted RBP27.61■■■□□ 2.01
SHF-201ENST00000290894 TCOF1Q13428 1488 aaKnown RBP27.61■■■□□ 2.01
SHF-201ENST00000290894 CDK11AQ9UQ88 783 aaPredicted RBP27.6■■■□□ 2.01
SHF-201ENST00000290894 SCAF1Q9H7N4 1312 aaKnown RBP27.57■■■□□ 2
SHF-201ENST00000290894 UACAQ9BZF9 1416 aa27.56■■■□□ 2
SHF-201ENST00000290894 MIA2Q96PC5 1412 aa27.56■■■□□ 2
SHF-201ENST00000290894 PELP1Q8IZL8 1130 aaKnown RBP27.52■■■□□ 2
SHF-201ENST00000290894 TRIM52Q96A61 297 aa27.52■■■□□ 2
SHF-201ENST00000290894 ACIN1Q9UKV3 1341 aaKnown RBP27.51■■□□□ 1.99
SHF-201ENST00000290894 KDM6BO15054 1643 aa27.5■■□□□ 1.99
SHF-201ENST00000290894 ZNF777Q9ULD5 760 aaPredicted RBP27.49■■□□□ 1.99
SHF-201ENST00000290894 TROQ12816 1431 aaPredicted RBP27.49■■□□□ 1.99
SHF-201ENST00000290894 KIF14Q15058 1648 aa27.46■■□□□ 1.99
SHF-201ENST00000290894 CENPBP07199 599 aaPredicted RBP27.45■■□□□ 1.98
SHF-201ENST00000290894 HIRIP3Q9BW71 556 aaPredicted RBP27.45■■□□□ 1.98
SHF-201ENST00000290894 CFDP1Q9UEE9 299 aaPredicted RBP27.44■■□□□ 1.98
SHF-201ENST00000290894 CHD1O14646 1710 aa27.44■■□□□ 1.98
SHF-201ENST00000290894 DAPK1P53355 1430 aa27.44■■□□□ 1.98
SHF-201ENST00000290894 GCC2Q8IWJ2 1684 aa27.43■■□□□ 1.98
SHF-201ENST00000290894 TONSLQ96HA7 1378 aa27.42■■□□□ 1.98
SHF-201ENST00000290894 PPP1R15AO75807 674 aaPredicted RBP27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms