RNA–Protein interactions for RNA: ENST00000288986.6

NCK1-201, Transcript of NCK adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCK1, Length 1,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-201ENST00000288986 JPH4Q96JJ6 628 aa25.18■■□□□ 1.62
NCK1-201ENST00000288986 KIF21BO75037 1637 aa25.13■■□□□ 1.61
NCK1-201ENST00000288986 UBTFP17480 764 aaKnown RBP25.1■■□□□ 1.61
NCK1-201ENST00000288986 ARHGEF11O15085 1522 aa25.1■■□□□ 1.61
NCK1-201ENST00000288986 IQGAP2Q13576 1575 aa25.07■■□□□ 1.6
NCK1-201ENST00000288986 GOLGA3Q08378 1498 aa25.07■■□□□ 1.6
NCK1-201ENST00000288986 PRG4Q92954 1404 aaPredicted RBP25.06■■□□□ 1.6
NCK1-201ENST00000288986 RIMBP3CA6NJZ7 1639 aa25.04■■□□□ 1.6
NCK1-201ENST00000288986 RIMBP3BA6NNM3 1639 aa25.04■■□□□ 1.6
NCK1-201ENST00000288986 SHROOM2Q13796 1616 aa25.04■■□□□ 1.6
NCK1-201ENST00000288986 RIMBP3Q9UFD9 1639 aa25.04■■□□□ 1.6
NCK1-201ENST00000288986 CTTNBP2Q8WZ74 1663 aa25.02■■□□□ 1.6
NCK1-201ENST00000288986 RANGAP1P46060 587 aaPredicted RBP24.99■■□□□ 1.59
NCK1-201ENST00000288986 ERCC6L2Q5T890 1561 aa24.99■■□□□ 1.59
NCK1-201ENST00000288986 CYB5RLQ6IPT4 315 aa24.97■■□□□ 1.59
NCK1-201ENST00000288986 CARMIL2Q6F5E8 1435 aa24.94■■□□□ 1.58
NCK1-201ENST00000288986 UGGT2Q9NYU1 1516 aa24.93■■□□□ 1.58
NCK1-201ENST00000288986 ARAP1Q96P48 1450 aa24.91■■□□□ 1.58
NCK1-201ENST00000288986 TTBK1Q5TCY1 1321 aaPredicted RBP24.9■■□□□ 1.58
NCK1-201ENST00000288986 LOC105371045A0A1W2PR82 267 aa24.9■■□□□ 1.58
NCK1-201ENST00000288986 DISP1Q96F81 1524 aa24.88■■□□□ 1.57
NCK1-201ENST00000288986 P3H3Q8IVL6 736 aa24.86■■□□□ 1.57
NCK1-201ENST00000288986 TNIKQ9UKE5 1360 aa24.83■■□□□ 1.57
NCK1-201ENST00000288986 KIAA0556O60303 1618 aa24.81■■□□□ 1.56
NCK1-201ENST00000288986 PTPRGP23470 1445 aa24.81■■□□□ 1.56
NCK1-201ENST00000288986 SAMD9Q5K651 1589 aa24.73■■□□□ 1.55
NCK1-201ENST00000288986 EFCAB5A4FU69 1503 aa24.7■■□□□ 1.54
NCK1-201ENST00000288986 FHOD3Q2V2M9 1422 aa24.69■■□□□ 1.54
NCK1-201ENST00000288986 ARHGAP35Q9NRY4 1499 aa24.66■■□□□ 1.54
NCK1-201ENST00000288986 CLIP1P30622 1438 aa24.65■■□□□ 1.54
NCK1-201ENST00000288986 UACAQ9BZF9 1416 aa24.63■■□□□ 1.53
NCK1-201ENST00000288986 CEP162Q5TB80 1403 aa24.61■■□□□ 1.53
NCK1-201ENST00000288986 NPM1P06748 294 aaKnown RBP eCLIP24.61■■□□□ 1.53
NCK1-201ENST00000288986 PLB1Q6P1J6 1458 aa24.6■■□□□ 1.53
NCK1-201ENST00000288986 ADCY10Q96PN6 1610 aa24.57■■□□□ 1.52
NCK1-201ENST00000288986 UHRF1BP1LA0JNW5 1464 aa24.54■■□□□ 1.52
NCK1-201ENST00000288986 ABCC2Q92887 1545 aa24.54■■□□□ 1.52
NCK1-201ENST00000288986 FMN1Q68DA7 1419 aa24.53■■□□□ 1.52
NCK1-201ENST00000288986 ABCA8O94911 1581 aa24.51■■□□□ 1.51
NCK1-201ENST00000288986 ARID3CA6NKF2 412 aa24.51■■□□□ 1.51
NCK1-201ENST00000288986 ATP1B4Q9UN42 357 aaPredicted RBP24.5■■□□□ 1.51
NCK1-201ENST00000288986 RAPGEF6Q8TEU7 1601 aa24.46■■□□□ 1.51
NCK1-201ENST00000288986 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.44■■□□□ 1.5
NCK1-201ENST00000288986 HNRNPUL2Q1KMD3 747 aaKnown RBP24.44■■□□□ 1.5
NCK1-201ENST00000288986 KDM5BQ9UGL1 1544 aa24.44■■□□□ 1.5
NCK1-201ENST00000288986 NUP153P49790 1475 aaKnown RBP24.4■■□□□ 1.5
NCK1-201ENST00000288986 TRHP20396 242 aaPredicted RBP24.39■■□□□ 1.49
NCK1-201ENST00000288986 ATP10BO94823 1461 aa24.38■■□□□ 1.49
NCK1-201ENST00000288986 ZCCHC11Q5TAX3 1644 aaKnown RBP24.37■■□□□ 1.49
NCK1-201ENST00000288986 CASKIN1Q8WXD9 1431 aa24.35■■□□□ 1.49
NCK1-201ENST00000288986 MAPKBP1O60336 1514 aa24.35■■□□□ 1.49
NCK1-201ENST00000288986 ASXL2Q76L83 1435 aa24.34■■□□□ 1.49
NCK1-201ENST00000288986 HECW1Q76N89 1606 aa24.32■■□□□ 1.48
NCK1-201ENST00000288986 PCF11O94913 1555 aaKnown RBP24.32■■□□□ 1.48
NCK1-201ENST00000288986 FYCO1Q9BQS8 1478 aa24.29■■□□□ 1.48
NCK1-201ENST00000288986 EPRSP07814 1512 aaKnown RBP24.29■■□□□ 1.48
NCK1-201ENST00000288986 VPS8Q8N3P4 1428 aa24.28■■□□□ 1.48
NCK1-201ENST00000288986 PLEKHD1A6NEE1 506 aa24.27■■□□□ 1.48
NCK1-201ENST00000288986 KCNH8Q96L42 1107 aa24.27■■□□□ 1.48
NCK1-201ENST00000288986 CDK13Q14004 1512 aaKnown RBP24.27■■□□□ 1.48
NCK1-201ENST00000288986 FAM69CQ0P6D2 419 aa24.27■■□□□ 1.48
NCK1-201ENST00000288986 WDR7Q9Y4E6 1490 aa24.25■■□□□ 1.47
NCK1-201ENST00000288986 CDK11AQ9UQ88 783 aaPredicted RBP24.24■■□□□ 1.47
NCK1-201ENST00000288986 ABCC10Q5T3U5 1492 aa24.24■■□□□ 1.47
NCK1-201ENST00000288986 CCDC18Q5T9S5 1454 aa24.21■■□□□ 1.47
NCK1-201ENST00000288986 LRRIQ1Q96JM4 1722 aa24.18■■□□□ 1.46
NCK1-201ENST00000288986 DIP2BQ9P265 1576 aa24.17■■□□□ 1.46
NCK1-201ENST00000288986 APLP2Q06481 763 aa24.12■■□□□ 1.45
NCK1-201ENST00000288986 KIF13AQ9H1H9 1805 aa24.12■■□□□ 1.45
NCK1-201ENST00000288986 TROQ12816 1431 aaPredicted RBP24.08■■□□□ 1.45
NCK1-201ENST00000288986 GLI2P10070 1586 aa24.08■■□□□ 1.45
NCK1-201ENST00000288986 MTUS2Q5JR59 1369 aa24.06■■□□□ 1.44
NCK1-201ENST00000288986 MAGI3Q5TCQ9 1506 aa24.04■■□□□ 1.44
NCK1-201ENST00000288986 CD109Q6YHK3 1445 aa24.03■■□□□ 1.44
NCK1-201ENST00000288986 TIAM1Q13009 1591 aa24.02■■□□□ 1.44
NCK1-201ENST00000288986 KANK4Q5T7N3 995 aaPredicted RBP23.99■■□□□ 1.43
NCK1-201ENST00000288986 TSPOAP1O95153 1857 aa23.99■■□□□ 1.43
NCK1-201ENST00000288986 KIF14Q15058 1648 aa23.98■■□□□ 1.43
NCK1-201ENST00000288986 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.98■■□□□ 1.43
NCK1-201ENST00000288986 MAP3K4Q9Y6R4 1608 aa23.98■■□□□ 1.43
NCK1-201ENST00000288986 CFAP43Q8NDM7 1665 aa23.98■■□□□ 1.43
NCK1-201ENST00000288986 ABCA9Q8IUA7 1624 aa23.98■■□□□ 1.43
NCK1-201ENST00000288986 MAP3K1Q13233 1512 aa23.98■■□□□ 1.43
NCK1-201ENST00000288986 LRRC9Q6ZRR7 1453 aa23.95■■□□□ 1.42
NCK1-201ENST00000288986 EHBP1L1Q8N3D4 1523 aa23.94■■□□□ 1.42
NCK1-201ENST00000288986 TTC37Q6PGP7 1564 aa23.94■■□□□ 1.42
NCK1-201ENST00000288986 TEX14Q8IWB6 1497 aa23.9■■□□□ 1.42
NCK1-201ENST00000288986 PPRC1Q5VV67 1664 aaKnown RBP23.88■■□□□ 1.41
NCK1-201ENST00000288986 PLCH2O75038 1416 aa23.88■■□□□ 1.41
NCK1-201ENST00000288986 CCNB3Q8WWL7 1395 aa23.86■■□□□ 1.41
NCK1-201ENST00000288986 PPARGC1BQ86YN6 1023 aaKnown RBP23.84■■□□□ 1.41
NCK1-201ENST00000288986 NCOA2Q15596 1464 aa23.84■■□□□ 1.41
NCK1-201ENST00000288986 EFCAB2Q5VUJ9 269 aa23.84■■□□□ 1.41
NCK1-201ENST00000288986 SUPT6HQ7KZ85 1726 aaKnown RBP23.84■■□□□ 1.41
NCK1-201ENST00000288986 FANCAO15360 1455 aa23.82■■□□□ 1.4
NCK1-201ENST00000288986 MYO5CQ9NQX4 1742 aa23.82■■□□□ 1.4
NCK1-201ENST00000288986 GPATCH8Q9UKJ3 1502 aaKnown RBP23.81■■□□□ 1.4
NCK1-201ENST00000288986 CFDP1Q9UEE9 299 aaPredicted RBP23.8■■□□□ 1.4
NCK1-201ENST00000288986 ARHGAP5Q13017 1502 aa23.8■■□□□ 1.4
NCK1-201ENST00000288986 ZNF777Q9ULD5 760 aaPredicted RBP23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms