RNA–Protein interactions for RNA: ENST00000288986.6

NCK1-201, Transcript of NCK adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCK1, Length 1,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-201ENST00000288986 NISCHQ9Y2I1 1504 aa36.46■■■■□ 3.43
NCK1-201ENST00000288986 CCDC180Q9P1Z9 1646 aa32.18■■■□□ 2.74
NCK1-201ENST00000288986 ABCC9O60706 1549 aa31.34■■■□□ 2.61
NCK1-201ENST00000288986 DCAF8L2P0C7V8 631 aa30.57■■■□□ 2.48
NCK1-201ENST00000288986 ZCCHC6Q5VYS8 1495 aaKnown RBP30.42■■■□□ 2.46
NCK1-201ENST00000288986 NACADO15069 1562 aa30.25■■■□□ 2.43
NCK1-201ENST00000288986 RB1CC1Q8TDY2 1594 aa30.21■■■□□ 2.43
NCK1-201ENST00000288986 MYO15BQ96JP2 1530 aa30.13■■■□□ 2.41
NCK1-201ENST00000288986 DCAF1Q9Y4B6 1507 aa30.12■■■□□ 2.41
NCK1-201ENST00000288986 SCRIBQ14160 1630 aa29.49■■■□□ 2.31
NCK1-201ENST00000288986 UNC13AQ9UPW8 1703 aa29.48■■■□□ 2.31
NCK1-201ENST00000288986 PABPN1Q86U42 306 aaKnown RBP eCLIP29.42■■■□□ 2.3
NCK1-201ENST00000288986 BICRAQ9NZM4 1560 aa29.26■■■□□ 2.28
NCK1-201ENST00000288986 SHROOM4Q9ULL8 1493 aa29.14■■■□□ 2.26
NCK1-201ENST00000288986 DNAJC5BQ9UF47 199 aa28.51■■■□□ 2.16
NCK1-201ENST00000288986 EIF4G1Q04637 1599 aaKnown RBP28.5■■■□□ 2.15
NCK1-201ENST00000288986 CECR2Q9BXF3 1484 aa28.41■■■□□ 2.14
NCK1-201ENST00000288986 CC2D2AQ9P2K1 1620 aa28.31■■■□□ 2.12
NCK1-201ENST00000288986 BAZ1AQ9NRL2 1556 aaPredicted RBP28.24■■■□□ 2.11
NCK1-201ENST00000288986 SMARCA4P51532 1647 aa28.2■■■□□ 2.11
NCK1-201ENST00000288986 MROH2BQ7Z745 1585 aa28.13■■■□□ 2.09
NCK1-201ENST00000288986 ATAD2BQ9ULI0 1458 aa28.01■■■□□ 2.07
NCK1-201ENST00000288986 SMARCA2P51531 1590 aa27.96■■■□□ 2.07
NCK1-201ENST00000288986 RSF1Q96T23 1441 aaPredicted RBP27.94■■■□□ 2.06
NCK1-201ENST00000288986 NCAPD3P42695 1498 aa27.93■■■□□ 2.06
NCK1-201ENST00000288986 PEG3Q9GZU2 1588 aa27.89■■■□□ 2.06
NCK1-201ENST00000288986 WIZO95785 1651 aa27.83■■■□□ 2.05
NCK1-201ENST00000288986 BAZ1BQ9UIG0 1483 aaKnown RBP27.81■■■□□ 2.04
NCK1-201ENST00000288986 HMGXB3Q12766 1538 aa27.78■■■□□ 2.04
NCK1-201ENST00000288986 SUPT5HO00267 1087 aaKnown RBP27.62■■■□□ 2.01
NCK1-201ENST00000288986 TOP2AP11388 1531 aaKnown RBP27.52■■■□□ 2
NCK1-201ENST00000288986 CCDC88BA6NC98 1476 aa27.26■■□□□ 1.95
NCK1-201ENST00000288986 NESP48681 1621 aa27.21■■□□□ 1.95
NCK1-201ENST00000288986 CADPSQ9ULU8 1353 aa27.18■■□□□ 1.94
NCK1-201ENST00000288986 LAMC3Q9Y6N6 1575 aa27.12■■□□□ 1.93
NCK1-201ENST00000288986 CFTRP13569 1480 aa27.05■■□□□ 1.92
NCK1-201ENST00000288986 ERCC6Q03468 1493 aa27.01■■□□□ 1.91
NCK1-201ENST00000288986 PDS5BQ9NTI5 1447 aa26.99■■□□□ 1.91
NCK1-201ENST00000288986 FANCD2Q9BXW9 1451 aa26.86■■□□□ 1.89
NCK1-201ENST00000288986 KIF21AQ7Z4S6 1674 aa26.82■■□□□ 1.88
NCK1-201ENST00000288986 CEP164Q9UPV0 1460 aa26.78■■□□□ 1.88
NCK1-201ENST00000288986 PRDM2Q13029 1718 aa26.76■■□□□ 1.87
NCK1-201ENST00000288986 MRC2Q9UBG0 1479 aa26.66■■□□□ 1.86
NCK1-201ENST00000288986 THOC2Q8NI27 1593 aaKnown RBP26.63■■□□□ 1.85
NCK1-201ENST00000288986 URB2Q14146 1524 aaKnown RBP26.54■■□□□ 1.84
NCK1-201ENST00000288986 WDR62O43379 1518 aa26.53■■□□□ 1.84
NCK1-201ENST00000288986 CUX2O14529 1486 aa26.53■■□□□ 1.84
NCK1-201ENST00000288986 ABCC8Q09428 1581 aa26.45■■□□□ 1.82
NCK1-201ENST00000288986 TOPBP1Q92547 1522 aa26.44■■□□□ 1.82
NCK1-201ENST00000288986 DNMBPQ6XZF7 1577 aa26.41■■□□□ 1.82
NCK1-201ENST00000288986 CUX1P39880 1505 aa26.35■■□□□ 1.81
NCK1-201ENST00000288986 WRNQ14191 1432 aaPredicted RBP eCLIP26.35■■□□□ 1.81
NCK1-201ENST00000288986 POLA1P09884 1462 aaPredicted RBP26.25■■□□□ 1.79
NCK1-201ENST00000288986 FGD5Q6ZNL6 1462 aa26.23■■□□□ 1.79
NCK1-201ENST00000288986 SYNJ1O43426 1573 aa26.21■■□□□ 1.79
NCK1-201ENST00000288986 IFT140Q96RY7 1462 aa26.2■■□□□ 1.78
NCK1-201ENST00000288986 TOP2BQ02880 1626 aa26.2■■□□□ 1.78
NCK1-201ENST00000288986 SOGA1O94964 1423 aa26.19■■□□□ 1.78
NCK1-201ENST00000288986 RAD54L2Q9Y4B4 1467 aa26.16■■□□□ 1.78
NCK1-201ENST00000288986 BIVM-ERCC5R4GMW8 1640 aa26.16■■□□□ 1.78
NCK1-201ENST00000288986 TARBP1Q13395 1621 aaKnown RBP26.09■■□□□ 1.77
NCK1-201ENST00000288986 ZNF608Q9ULD9 1512 aaPredicted RBP26.08■■□□□ 1.76
NCK1-201ENST00000288986 TRIM41Q8WV44 630 aa26.05■■□□□ 1.76
NCK1-201ENST00000288986 TDRD9Q8NDG6 1382 aaKnown RBP26.03■■□□□ 1.76
NCK1-201ENST00000288986 AQRO60306 1485 aaKnown RBP eCLIP26■■□□□ 1.75
NCK1-201ENST00000288986 ABCA10Q8WWZ4 1543 aa25.97■■□□□ 1.75
NCK1-201ENST00000288986 EIF4G3O43432 1585 aaKnown RBP25.93■■□□□ 1.74
NCK1-201ENST00000288986 CHIC1Q5VXU3 224 aa25.9■■□□□ 1.74
NCK1-201ENST00000288986 WDR97A6NE52 1622 aa25.9■■□□□ 1.74
NCK1-201ENST00000288986 GAPVD1Q14C86 1478 aa25.87■■□□□ 1.73
NCK1-201ENST00000288986 GRIN2BQ13224 1484 aa25.8■■□□□ 1.72
NCK1-201ENST00000288986 ABCA5Q8WWZ7 1642 aa25.8■■□□□ 1.72
NCK1-201ENST00000288986 KIF27Q86VH2 1401 aa25.77■■□□□ 1.72
NCK1-201ENST00000288986 SNAPC4Q5SXM2 1469 aa25.74■■□□□ 1.71
NCK1-201ENST00000288986 FBLN2P98095 1184 aa25.73■■□□□ 1.71
NCK1-201ENST00000288986 PBRM1Q86U86 1689 aa25.71■■□□□ 1.71
NCK1-201ENST00000288986 MAGI1Q96QZ7 1491 aaPredicted RBP25.68■■□□□ 1.7
NCK1-201ENST00000288986 CHMP7Q8WUX9 453 aaPredicted RBP25.67■■□□□ 1.7
NCK1-201ENST00000288986 ERICH3Q5RHP9 1530 aa25.66■■□□□ 1.7
NCK1-201ENST00000288986 RUSC2Q8N2Y8 1516 aa25.65■■□□□ 1.7
NCK1-201ENST00000288986 IGF1RP08069 1367 aa25.65■■□□□ 1.7
NCK1-201ENST00000288986 OSCARQ8IYS5 282 aa25.61■■□□□ 1.69
NCK1-201ENST00000288986 SYNJ2O15056 1496 aa25.6■■□□□ 1.69
NCK1-201ENST00000288986 FHAD1B1AJZ9 1412 aa25.57■■□□□ 1.68
NCK1-201ENST00000288986 FAM9AQ8IZU1 332 aaPredicted RBP25.54■■□□□ 1.68
NCK1-201ENST00000288986 ADAMTS12P58397 1594 aa25.54■■□□□ 1.68
NCK1-201ENST00000288986 CHD1O14646 1710 aa25.53■■□□□ 1.68
NCK1-201ENST00000288986 CARMIL1Q5VZK9 1371 aa25.51■■□□□ 1.67
NCK1-201ENST00000288986 CSRNP3Q8WYN3 585 aa25.47■■□□□ 1.67
NCK1-201ENST00000288986 GRIN2AQ12879 1464 aa25.47■■□□□ 1.67
NCK1-201ENST00000288986 CUL7Q14999 1698 aa25.47■■□□□ 1.67
NCK1-201ENST00000288986 EEA1Q15075 1411 aa25.46■■□□□ 1.67
NCK1-201ENST00000288986 DNAJC5Q9H3Z4 198 aa25.42■■□□□ 1.66
NCK1-201ENST00000288986 RAPGEF2Q9Y4G8 1499 aa25.36■■□□□ 1.65
NCK1-201ENST00000288986 PRXQ9BXM0 1461 aa25.33■■□□□ 1.65
NCK1-201ENST00000288986 NUP160Q12769 1436 aa25.32■■□□□ 1.64
NCK1-201ENST00000288986 CEP170Q5SW79 1584 aa25.31■■□□□ 1.64
NCK1-201ENST00000288986 CLASP1Q7Z460 1538 aa25.26■■□□□ 1.63
NCK1-201ENST00000288986 EHMT2Q96KQ7 1210 aa25.23■■□□□ 1.63
NCK1-201ENST00000288986 KIAA0586Q9BVV6 1533 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms