RNA–Protein interactions for RNA: ENST00000275603.8

CCT6A-201, Transcript of chaperonin containing TCP1 subunit 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT6A, Length 2,719 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6A-201ENST00000275603 IGF1RP08069 1367 aa24.1■■□□□ 1.45
CCT6A-201ENST00000275603 ERCC6Q03468 1493 aa24.08■■□□□ 1.44
CCT6A-201ENST00000275603 CLIP1P30622 1438 aa24.08■■□□□ 1.44
CCT6A-201ENST00000275603 ERICH3Q5RHP9 1530 aa24.05■■□□□ 1.44
CCT6A-201ENST00000275603 VPS8Q8N3P4 1428 aa24■■□□□ 1.43
CCT6A-201ENST00000275603 WDR97A6NE52 1622 aa23.99■■□□□ 1.43
CCT6A-201ENST00000275603 WDR62O43379 1518 aa23.99■■□□□ 1.43
CCT6A-201ENST00000275603 CARMIL1Q5VZK9 1371 aa23.97■■□□□ 1.43
CCT6A-201ENST00000275603 TDRD9Q8NDG6 1382 aaKnown RBP23.97■■□□□ 1.43
CCT6A-201ENST00000275603 APLP2Q06481 763 aa23.96■■□□□ 1.43
CCT6A-201ENST00000275603 TARBP1Q13395 1621 aaKnown RBP23.95■■□□□ 1.43
CCT6A-201ENST00000275603 DHX57Q6P158 1386 aaKnown RBP23.94■■□□□ 1.42
CCT6A-201ENST00000275603 FKBP8Q14318 412 aa23.93■■□□□ 1.42
CCT6A-201ENST00000275603 GAPVD1Q14C86 1478 aa23.9■■□□□ 1.42
CCT6A-201ENST00000275603 THOC2Q8NI27 1593 aaKnown RBP23.9■■□□□ 1.42
CCT6A-201ENST00000275603 ABCA5Q8WWZ7 1642 aa23.9■■□□□ 1.42
CCT6A-201ENST00000275603 ITGAEP38570 1179 aa23.89■■□□□ 1.42
CCT6A-201ENST00000275603 CLSPNQ9HAW4 1339 aa23.87■■□□□ 1.41
CCT6A-201ENST00000275603 IFT140Q96RY7 1462 aa23.85■■□□□ 1.41
CCT6A-201ENST00000275603 CUL7Q14999 1698 aa23.82■■□□□ 1.4
CCT6A-201ENST00000275603 KANK4Q5T7N3 995 aaPredicted RBP23.81■■□□□ 1.4
CCT6A-201ENST00000275603 AQRO60306 1485 aaKnown RBP eCLIP23.8■■□□□ 1.41e-7■■■■■ 51.5
CCT6A-201ENST00000275603 RBM19Q9Y4C8 960 aaKnown RBP23.8■■□□□ 1.4
CCT6A-201ENST00000275603 ZNF608Q9ULD9 1512 aaPredicted RBP23.75■■□□□ 1.39
CCT6A-201ENST00000275603 HIRIP3Q9BW71 556 aaPredicted RBP23.73■■□□□ 1.39
CCT6A-201ENST00000275603 DDX10Q13206 875 aaKnown RBP23.72■■□□□ 1.39
CCT6A-201ENST00000275603 TRIM52Q96A61 297 aa23.71■■□□□ 1.39
CCT6A-201ENST00000275603 PBRM1Q86U86 1689 aa23.7■■□□□ 1.38
CCT6A-201ENST00000275603 GRIN2BQ13224 1484 aa23.69■■□□□ 1.38
CCT6A-201ENST00000275603 MSH5O43196 834 aa23.69■■□□□ 1.38
CCT6A-201ENST00000275603 ARAP1Q96P48 1450 aa23.65■■□□□ 1.38
CCT6A-201ENST00000275603 FHAD1B1AJZ9 1412 aa23.63■■□□□ 1.37
CCT6A-201ENST00000275603 EIF4G3O43432 1585 aaKnown RBP23.62■■□□□ 1.37
CCT6A-201ENST00000275603 ARHGAP35Q9NRY4 1499 aa23.6■■□□□ 1.37
CCT6A-201ENST00000275603 ADAMTS12P58397 1594 aa23.58■■□□□ 1.37
CCT6A-201ENST00000275603 CTTNBP2Q8WZ74 1663 aa23.56■■□□□ 1.36
CCT6A-201ENST00000275603 SIN3AQ96ST3 1273 aa23.55■■□□□ 1.36
CCT6A-201ENST00000275603 IRX6P78412 446 aaPredicted RBP23.54■■□□□ 1.36
CCT6A-201ENST00000275603 SNAPC4Q5SXM2 1469 aa23.53■■□□□ 1.36
CCT6A-201ENST00000275603 NEFLP07196 543 aa23.5■■□□□ 1.35
CCT6A-201ENST00000275603 RRBP1Q9P2E9 1410 aaKnown RBP23.49■■□□□ 1.35
CCT6A-201ENST00000275603 MAGI1Q96QZ7 1491 aaPredicted RBP23.47■■□□□ 1.35
CCT6A-201ENST00000275603 P3H3Q8IVL6 736 aa23.46■■□□□ 1.35
CCT6A-201ENST00000275603 EFCAB5A4FU69 1503 aa23.42■■□□□ 1.34
CCT6A-201ENST00000275603 CHMP7Q8WUX9 453 aaPredicted RBP23.41■■□□□ 1.34
CCT6A-201ENST00000275603 RAB3GAP2Q9H2M9 1393 aa23.41■■□□□ 1.34
CCT6A-201ENST00000275603 GRIN2AQ12879 1464 aa23.41■■□□□ 1.34
CCT6A-201ENST00000275603 SYNJ2O15056 1496 aa23.4■■□□□ 1.34
CCT6A-201ENST00000275603 CCNB3Q8WWL7 1395 aa23.39■■□□□ 1.34
CCT6A-201ENST00000275603 PPP1R15AO75807 674 aaPredicted RBP23.38■■□□□ 1.33
CCT6A-201ENST00000275603 MAPKBP1O60336 1514 aa23.38■■□□□ 1.33
CCT6A-201ENST00000275603 FHOD3Q2V2M9 1422 aa23.38■■□□□ 1.33
CCT6A-201ENST00000275603 FBLN2P98095 1184 aa23.38■■□□□ 1.33
CCT6A-201ENST00000275603 IQGAP2Q13576 1575 aa23.35■■□□□ 1.33
CCT6A-201ENST00000275603 SAMD9Q5K651 1589 aa23.33■■□□□ 1.33
CCT6A-201ENST00000275603 KIAA0586Q9BVV6 1533 aa23.32■■□□□ 1.32
CCT6A-201ENST00000275603 FMN1Q68DA7 1419 aa23.26■■□□□ 1.31
CCT6A-201ENST00000275603 ANP32CO43423 234 aa23.25■■□□□ 1.31
CCT6A-201ENST00000275603 ERICH6Q7L0X2 663 aa23.25■■□□□ 1.31
CCT6A-201ENST00000275603 CEP170Q5SW79 1584 aa23.25■■□□□ 1.31
CCT6A-201ENST00000275603 UGGT2Q9NYU1 1516 aa23.24■■□□□ 1.31
CCT6A-201ENST00000275603 ATP1B4Q9UN42 357 aaPredicted RBP23.23■■□□□ 1.31
CCT6A-201ENST00000275603 PCF11O94913 1555 aaKnown RBP23.22■■□□□ 1.31
CCT6A-201ENST00000275603 NUP160Q12769 1436 aa23.22■■□□□ 1.31
CCT6A-201ENST00000275603 FAM50AQ14320 339 aaKnown RBP23.21■■□□□ 1.31
CCT6A-201ENST00000275603 CASKIN1Q8WXD9 1431 aa23.21■■□□□ 1.31
CCT6A-201ENST00000275603 FYCO1Q9BQS8 1478 aa23.19■■□□□ 1.3
CCT6A-201ENST00000275603 HNRNPUQ00839 825 aaKnown RBP eCLIP23.19■■□□□ 1.3
CCT6A-201ENST00000275603 MAP3K1Q13233 1512 aa23.19■■□□□ 1.3
CCT6A-201ENST00000275603 TIAM1Q13009 1591 aa23.17■■□□□ 1.3
CCT6A-201ENST00000275603 CDK11AQ9UQ88 783 aaPredicted RBP23.16■■□□□ 1.3
CCT6A-201ENST00000275603 DISP1Q96F81 1524 aa23.14■■□□□ 1.29
CCT6A-201ENST00000275603 FANCIQ9NVI1 1328 aa23.13■■□□□ 1.29
CCT6A-201ENST00000275603 CCER2I3L3R5 266 aa23.13■■□□□ 1.29
CCT6A-201ENST00000275603 JPH4Q96JJ6 628 aa23.13■■□□□ 1.29
CCT6A-201ENST00000275603 SETD5Q9C0A6 1442 aa23.12■■□□□ 1.29
CCT6A-201ENST00000275603 DEKP35659 375 aaKnown RBP23.11■■□□□ 1.29
CCT6A-201ENST00000275603 CHD1O14646 1710 aa23.11■■□□□ 1.29
CCT6A-201ENST00000275603 PHLDB1Q86UU1 1377 aa23.1■■□□□ 1.29
CCT6A-201ENST00000275603 KIAA0556O60303 1618 aa23.1■■□□□ 1.29
CCT6A-201ENST00000275603 LRRC9Q6ZRR7 1453 aa23.09■■□□□ 1.29
CCT6A-201ENST00000275603 PRKCSHP14314 528 aaPredicted RBP23.09■■□□□ 1.29
CCT6A-201ENST00000275603 NBR1Q14596 966 aa23.08■■□□□ 1.29
CCT6A-201ENST00000275603 CFAP43Q8NDM7 1665 aa23.08■■□□□ 1.28
CCT6A-201ENST00000275603 B4GALNT3Q6L9W6 998 aa23.06■■□□□ 1.28
CCT6A-201ENST00000275603 CCDC184Q52MB2 194 aa23.04■■□□□ 1.28
CCT6A-201ENST00000275603 CARMIL2Q6F5E8 1435 aa23.03■■□□□ 1.28
CCT6A-201ENST00000275603 LRRIQ1Q96JM4 1722 aa22.99■■□□□ 1.27
CCT6A-201ENST00000275603 PAK3O75914 559 aaPredicted RBP22.99■■□□□ 1.27
CCT6A-201ENST00000275603 HECW1Q76N89 1606 aa22.97■■□□□ 1.27
CCT6A-201ENST00000275603 SENP3-EIF4A1A0A087X0R7 540 aa22.95■■□□□ 1.26
CCT6A-201ENST00000275603 CCDC18Q5T9S5 1454 aa22.94■■□□□ 1.26
CCT6A-201ENST00000275603 PRG4Q92954 1404 aaPredicted RBP22.94■■□□□ 1.26
CCT6A-201ENST00000275603 ANO8Q9HCE9 1232 aaPredicted RBP22.94■■□□□ 1.26
CCT6A-201ENST00000275603 MTUS2Q5JR59 1369 aa22.93■■□□□ 1.26
CCT6A-201ENST00000275603 EPRSP07814 1512 aaKnown RBP22.92■■□□□ 1.26
CCT6A-201ENST00000275603 ARID3CA6NKF2 412 aa22.89■■□□□ 1.26
CCT6A-201ENST00000275603 RAPGEF6Q8TEU7 1601 aa22.89■■□□□ 1.26
CCT6A-201ENST00000275603 FAM9BQ8IZU0 186 aa22.88■■□□□ 1.25
CCT6A-201ENST00000275603 TONSLQ96HA7 1378 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms