RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 SETD5Q9C0A6 1442 aa26.51■■□□□ 1.83
SSC4D-201ENST00000275560 PPP1R15AO75807 674 aaPredicted RBP26.51■■□□□ 1.83
SSC4D-201ENST00000275560 RBM19Q9Y4C8 960 aaKnown RBP26.51■■□□□ 1.83
SSC4D-201ENST00000275560 BCL11AQ9H165 835 aa26.5■■□□□ 1.83
SSC4D-201ENST00000275560 PHLDB1Q86UU1 1377 aa26.47■■□□□ 1.83
SSC4D-201ENST00000275560 NEFLP07196 543 aa26.46■■□□□ 1.83
SSC4D-201ENST00000275560 ATP1B4Q9UN42 357 aaPredicted RBP26.43■■□□□ 1.82
SSC4D-201ENST00000275560 P3H3Q8IVL6 736 aa26.42■■□□□ 1.82
SSC4D-201ENST00000275560 TIAM1Q13009 1591 aa26.42■■□□□ 1.82
SSC4D-201ENST00000275560 ANP32CO43423 234 aa26.36■■□□□ 1.81
SSC4D-201ENST00000275560 LRRC9Q6ZRR7 1453 aa26.35■■□□□ 1.81
SSC4D-201ENST00000275560 IRX6P78412 446 aaPredicted RBP26.3■■□□□ 1.8
SSC4D-201ENST00000275560 IGF1RP08069 1367 aa26.3■■□□□ 1.8
SSC4D-201ENST00000275560 MSH5O43196 834 aa26.28■■□□□ 1.8
SSC4D-201ENST00000275560 CCER2I3L3R5 266 aa26.28■■□□□ 1.8
SSC4D-201ENST00000275560 CARMIL1Q5VZK9 1371 aa26.21■■□□□ 1.79
SSC4D-201ENST00000275560 MAP3K1Q13233 1512 aa26.19■■□□□ 1.78
SSC4D-201ENST00000275560 CFTRP13569 1480 aa26.18■■□□□ 1.78
SSC4D-201ENST00000275560 PCF11O94913 1555 aaKnown RBP26.17■■□□□ 1.78
SSC4D-201ENST00000275560 HNRNPUQ00839 825 aaKnown RBP eCLIP26.15■■□□□ 1.78
SSC4D-201ENST00000275560 TIMELESSQ9UNS1 1208 aa26.14■■□□□ 1.78
SSC4D-201ENST00000275560 TONSLQ96HA7 1378 aa26.14■■□□□ 1.78
SSC4D-201ENST00000275560 NCAPD3P42695 1498 aa26.13■■□□□ 1.77
SSC4D-201ENST00000275560 FHOD3Q2V2M9 1422 aa26.12■■□□□ 1.77
SSC4D-201ENST00000275560 HMGXB3Q12766 1538 aa26.1■■□□□ 1.77
SSC4D-201ENST00000275560 CFAP43Q8NDM7 1665 aa26.08■■□□□ 1.77
SSC4D-201ENST00000275560 FHAD1B1AJZ9 1412 aa26.07■■□□□ 1.76
SSC4D-201ENST00000275560 FGD5Q6ZNL6 1462 aa26.03■■□□□ 1.76
SSC4D-201ENST00000275560 CCDC18Q5T9S5 1454 aa25.99■■□□□ 1.75
SSC4D-201ENST00000275560 CDK11AQ9UQ88 783 aaPredicted RBP25.99■■□□□ 1.75
SSC4D-201ENST00000275560 PTPRKQ15262 1439 aa25.99■■□□□ 1.75
SSC4D-201ENST00000275560 CCDC184Q52MB2 194 aa25.96■■□□□ 1.75
SSC4D-201ENST00000275560 FGD6Q6ZV73 1430 aa25.94■■□□□ 1.74
SSC4D-201ENST00000275560 AQRO60306 1485 aaKnown RBP eCLIP25.92■■□□□ 1.742e-9■■■■■ 29.7
SSC4D-201ENST00000275560 ERICH6Q7L0X2 663 aa25.92■■□□□ 1.74
SSC4D-201ENST00000275560 WASHC2AQ641Q2 1341 aa25.91■■□□□ 1.74
SSC4D-201ENST00000275560 FANCIQ9NVI1 1328 aa25.91■■□□□ 1.74
SSC4D-201ENST00000275560 HSPA5P11021 654 aaKnown RBP25.89■■□□□ 1.73
SSC4D-201ENST00000275560 FYCO1Q9BQS8 1478 aa25.89■■□□□ 1.73
SSC4D-201ENST00000275560 UACAQ9BZF9 1416 aa25.88■■□□□ 1.73
SSC4D-201ENST00000275560 CASKIN1Q8WXD9 1431 aa25.86■■□□□ 1.73
SSC4D-201ENST00000275560 KDM5BQ9UGL1 1544 aa25.85■■□□□ 1.73
SSC4D-201ENST00000275560 PTPN23Q9H3S7 1636 aa25.85■■□□□ 1.73
SSC4D-201ENST00000275560 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.85■■□□□ 1.73
SSC4D-201ENST00000275560 HFM1A2PYH4 1435 aa25.84■■□□□ 1.73
SSC4D-201ENST00000275560 MTUS2Q5JR59 1369 aa25.84■■□□□ 1.73
SSC4D-201ENST00000275560 B4GALNT3Q6L9W6 998 aa25.83■■□□□ 1.73
SSC4D-201ENST00000275560 PRDM2Q13029 1718 aa25.83■■□□□ 1.73
SSC4D-201ENST00000275560 RAD54L2Q9Y4B4 1467 aa25.83■■□□□ 1.72
SSC4D-201ENST00000275560 FAM9BQ8IZU0 186 aa25.83■■□□□ 1.72
SSC4D-201ENST00000275560 NAIPQ13075 1403 aa25.82■■□□□ 1.72
SSC4D-201ENST00000275560 RRP7BPQ9NSQ0 103 aa25.82■■□□□ 1.72
SSC4D-201ENST00000275560 CHIC2Q9UKJ5 165 aa25.82■■□□□ 1.72
SSC4D-201ENST00000275560 CADPSQ9ULU8 1353 aa25.81■■□□□ 1.72
SSC4D-201ENST00000275560 PPP4R2Q9NY27 417 aa25.77■■□□□ 1.72
SSC4D-201ENST00000275560 C11orf95C9JLR9 678 aaPredicted RBP25.77■■□□□ 1.72
SSC4D-201ENST00000275560 FOXD1Q16676 465 aa25.73■■□□□ 1.71
SSC4D-201ENST00000275560 SNAPC4Q5SXM2 1469 aa25.71■■□□□ 1.71
SSC4D-201ENST00000275560 CNGB1Q14028 1251 aaPredicted RBP25.71■■□□□ 1.71
SSC4D-201ENST00000275560 EFCAB5A4FU69 1503 aa25.7■■□□□ 1.71
SSC4D-201ENST00000275560 NCOA2Q15596 1464 aa25.7■■□□□ 1.7
SSC4D-201ENST00000275560 EIF4G2P78344 907 aaKnown RBP eCLIP25.7■■□□□ 1.7
SSC4D-201ENST00000275560 MRS2Q9HD23 443 aa25.69■■□□□ 1.7
SSC4D-201ENST00000275560 LRRIQ1Q96JM4 1722 aa25.68■■□□□ 1.7
SSC4D-201ENST00000275560 FMN1Q68DA7 1419 aa25.67■■□□□ 1.7
SSC4D-201ENST00000275560 SENP3-EIF4A1A0A087X0R7 540 aa25.67■■□□□ 1.7
SSC4D-201ENST00000275560 MYOM3Q5VTT5 1437 aa25.66■■□□□ 1.7
SSC4D-201ENST00000275560 PRKRIP1Q9H875 184 aaPredicted RBP25.66■■□□□ 1.7
SSC4D-201ENST00000275560 DENND4BO75064 1496 aaPredicted RBP25.66■■□□□ 1.7
SSC4D-201ENST00000275560 CNTLNQ9NXG0 1405 aa25.66■■□□□ 1.7
SSC4D-201ENST00000275560 L3MBTL2Q969R5 705 aa25.64■■□□□ 1.7
SSC4D-201ENST00000275560 FANCD2Q9BXW9 1451 aa25.63■■□□□ 1.69
SSC4D-201ENST00000275560 CTTNBP2Q8WZ74 1663 aa25.63■■□□□ 1.69
SSC4D-201ENST00000275560 KDM6BO15054 1643 aa25.61■■□□□ 1.69
SSC4D-201ENST00000275560 DEKP35659 375 aaKnown RBP25.6■■□□□ 1.69
SSC4D-201ENST00000275560 POLA1P09884 1462 aaPredicted RBP25.6■■□□□ 1.69
SSC4D-201ENST00000275560 NBR1Q14596 966 aa25.59■■□□□ 1.69
SSC4D-201ENST00000275560 ERICH6BQ5W0A0 696 aa25.59■■□□□ 1.69
SSC4D-201ENST00000275560 PAK3O75914 559 aaPredicted RBP25.58■■□□□ 1.68
SSC4D-201ENST00000275560 CCDC7Q96M83 1385 aa25.57■■□□□ 1.68
SSC4D-201ENST00000275560 ABCA10Q8WWZ4 1543 aa25.57■■□□□ 1.68
SSC4D-201ENST00000275560 ARID3CA6NKF2 412 aa25.56■■□□□ 1.68
SSC4D-201ENST00000275560 ZBED9Q6R2W3 1325 aa25.56■■□□□ 1.68
SSC4D-201ENST00000275560 NBPF8Q3BBV2 869 aa25.55■■□□□ 1.68
SSC4D-201ENST00000275560 MPHOSPH9Q99550 1183 aa25.55■■□□□ 1.68
SSC4D-201ENST00000275560 MAGI3Q5TCQ9 1506 aa25.52■■□□□ 1.68
SSC4D-201ENST00000275560 SUPT6HQ7KZ85 1726 aaKnown RBP25.52■■□□□ 1.68
SSC4D-201ENST00000275560 NCOA1Q15788 1441 aa25.52■■□□□ 1.68
SSC4D-201ENST00000275560 AKNAQ7Z591 1439 aa25.51■■□□□ 1.67
SSC4D-201ENST00000275560 TOPBP1Q92547 1522 aa25.51■■□□□ 1.67
SSC4D-201ENST00000275560 GRIN2BQ13224 1484 aa25.51■■□□□ 1.67
SSC4D-201ENST00000275560 NOP58Q9Y2X3 529 aaKnown RBP25.49■■□□□ 1.67
SSC4D-201ENST00000275560 CUL7Q14999 1698 aa25.49■■□□□ 1.67
SSC4D-201ENST00000275560 DNMBPQ6XZF7 1577 aa25.49■■□□□ 1.67
SSC4D-201ENST00000275560 CC2D2AQ9P2K1 1620 aa25.49■■□□□ 1.67
SSC4D-201ENST00000275560 TDRD9Q8NDG6 1382 aaKnown RBP25.48■■□□□ 1.67
SSC4D-201ENST00000275560 KIF7Q2M1P5 1343 aa25.48■■□□□ 1.67
SSC4D-201ENST00000275560 POLR3GLQ9BT43 218 aa25.46■■□□□ 1.67
SSC4D-201ENST00000275560 UGGT2Q9NYU1 1516 aa25.46■■□□□ 1.67
SSC4D-201ENST00000275560 NESP48681 1621 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms