RNA–Protein interactions for RNA: ENST00000265388.9

TNPO3-201, Transcript of transportin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNPO3, Length 4,153 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO3-201ENST00000265388 FHAD1B1AJZ9 1412 aa11.87□□□□□ -0.51
TNPO3-201ENST00000265388 ARID3CA6NKF2 412 aa11.86□□□□□ -0.51
TNPO3-201ENST00000265388 TRIM52Q96A61 297 aa11.86□□□□□ -0.51
TNPO3-201ENST00000265388 SETD5Q9C0A6 1442 aa11.86□□□□□ -0.51
TNPO3-201ENST00000265388 ANP32CO43423 234 aa11.86□□□□□ -0.51
TNPO3-201ENST00000265388 MTUS2Q5JR59 1369 aa11.86□□□□□ -0.51
TNPO3-201ENST00000265388 RRBP1Q9P2E9 1410 aaKnown RBP11.85□□□□□ -0.51
TNPO3-201ENST00000265388 FGD5Q6ZNL6 1462 aa11.85□□□□□ -0.51
TNPO3-201ENST00000265388 TONSLQ96HA7 1378 aa11.84□□□□□ -0.51
TNPO3-201ENST00000265388 FHOD3Q2V2M9 1422 aa11.83□□□□□ -0.52
TNPO3-201ENST00000265388 CHIC2Q9UKJ5 165 aa11.8□□□□□ -0.52
TNPO3-201ENST00000265388 SUPT16HQ9Y5B9 1047 aaKnown RBP11.79□□□□□ -0.52
TNPO3-201ENST00000265388 FANCD2Q9BXW9 1451 aa11.79□□□□□ -0.52
TNPO3-201ENST00000265388 PHLDB1Q86UU1 1377 aa11.79□□□□□ -0.52
TNPO3-201ENST00000265388 FKBP8Q14318 412 aa11.78□□□□□ -0.52
TNPO3-201ENST00000265388 RAD54L2Q9Y4B4 1467 aa11.77□□□□□ -0.53
TNPO3-201ENST00000265388 KCNH8Q96L42 1107 aa11.77□□□□□ -0.53
TNPO3-201ENST00000265388 LRRC9Q6ZRR7 1453 aa11.76□□□□□ -0.53
TNPO3-201ENST00000265388 RRP7BPQ9NSQ0 103 aa11.75□□□□□ -0.53
TNPO3-201ENST00000265388 TDRD9Q8NDG6 1382 aaKnown RBP11.75□□□□□ -0.53
TNPO3-201ENST00000265388 CNGB1Q14028 1251 aaPredicted RBP11.75□□□□□ -0.53
TNPO3-201ENST00000265388 TIAM1Q13009 1591 aa11.74□□□□□ -0.53
TNPO3-201ENST00000265388 POLR3GLQ9BT43 218 aa11.73□□□□□ -0.53
TNPO3-201ENST00000265388 FMN1Q68DA7 1419 aa11.71□□□□□ -0.54
TNPO3-201ENST00000265388 PPP1R15AO75807 674 aaPredicted RBP11.7□□□□□ -0.54
TNPO3-201ENST00000265388 TIMELESSQ9UNS1 1208 aa11.7□□□□□ -0.54
TNPO3-201ENST00000265388 HNRNPUQ00839 825 aaKnown RBP eCLIP11.67□□□□□ -0.54
TNPO3-201ENST00000265388 NESP48681 1621 aa11.67□□□□□ -0.54
TNPO3-201ENST00000265388 CC2D2AQ9P2K1 1620 aa11.66□□□□□ -0.54
TNPO3-201ENST00000265388 ZNF326Q5BKZ1 582 aaKnown RBP11.65□□□□□ -0.54
TNPO3-201ENST00000265388 POLA1P09884 1462 aaPredicted RBP11.65□□□□□ -0.54
TNPO3-201ENST00000265388 PCF11O94913 1555 aaKnown RBP11.65□□□□□ -0.54
TNPO3-201ENST00000265388 FBLN2P98095 1184 aa11.65□□□□□ -0.54
TNPO3-201ENST00000265388 CASKIN1Q8WXD9 1431 aa11.64□□□□□ -0.55
TNPO3-201ENST00000265388 TOPBP1Q92547 1522 aa11.64□□□□□ -0.55
TNPO3-201ENST00000265388 FGD6Q6ZV73 1430 aa11.63□□□□□ -0.55
TNPO3-201ENST00000265388 ZNF777Q9ULD5 760 aaPredicted RBP11.63□□□□□ -0.55
TNPO3-201ENST00000265388 FYCO1Q9BQS8 1478 aa11.63□□□□□ -0.55
TNPO3-201ENST00000265388 ERICH6Q7L0X2 663 aa11.62□□□□□ -0.55
TNPO3-201ENST00000265388 MAP3K1Q13233 1512 aa11.62□□□□□ -0.55
TNPO3-201ENST00000265388 CCDC18Q5T9S5 1454 aa11.62□□□□□ -0.55
TNPO3-201ENST00000265388 WDR97A6NE52 1622 aa11.62□□□□□ -0.55
TNPO3-201ENST00000265388 EIF4G2P78344 907 aaKnown RBP eCLIP11.61□□□□□ -0.55
TNPO3-201ENST00000265388 PDS5BQ9NTI5 1447 aa11.61□□□□□ -0.55
TNPO3-201ENST00000265388 MAPKBP1O60336 1514 aa11.61□□□□□ -0.55
TNPO3-201ENST00000265388 CCER2I3L3R5 266 aa11.6□□□□□ -0.55
TNPO3-201ENST00000265388 DNMBPQ6XZF7 1577 aa11.6□□□□□ -0.55
TNPO3-201ENST00000265388 CDK11AQ9UQ88 783 aaPredicted RBP11.6□□□□□ -0.55
TNPO3-201ENST00000265388 IRX6P78412 446 aaPredicted RBP11.6□□□□□ -0.55
TNPO3-201ENST00000265388 ABCA10Q8WWZ4 1543 aa11.59□□□□□ -0.55
TNPO3-201ENST00000265388 EFCAB5A4FU69 1503 aa11.59□□□□□ -0.55
TNPO3-201ENST00000265388 GAPVD1Q14C86 1478 aa11.59□□□□□ -0.55
TNPO3-201ENST00000265388 FOXD1Q16676 465 aa11.59□□□□□ -0.55
TNPO3-201ENST00000265388 FAM9BQ8IZU0 186 aa11.59□□□□□ -0.55
TNPO3-201ENST00000265388 TSHZ2Q9NRE2 1034 aa11.58□□□□□ -0.56
TNPO3-201ENST00000265388 HSPA5P11021 654 aaKnown RBP11.57□□□□□ -0.56
TNPO3-201ENST00000265388 SLC4A1APQ9BWU0 796 aaKnown RBP11.57□□□□□ -0.56
TNPO3-201ENST00000265388 MYOM3Q5VTT5 1437 aa11.56□□□□□ -0.56
TNPO3-201ENST00000265388 NCOA2Q15596 1464 aa11.56□□□□□ -0.56
TNPO3-201ENST00000265388 UACAQ9BZF9 1416 aa11.55□□□□□ -0.56
TNPO3-201ENST00000265388 MRS2Q9HD23 443 aa11.54□□□□□ -0.56
TNPO3-201ENST00000265388 MPHOSPH9Q99550 1183 aa11.53□□□□□ -0.56
TNPO3-201ENST00000265388 PRDM2Q13029 1718 aa11.52□□□□□ -0.57
TNPO3-201ENST00000265388 AQRO60306 1485 aaKnown RBP eCLIP11.52□□□□□ -0.574e-7■■■■□ 25.8
TNPO3-201ENST00000265388 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.51□□□□□ -0.57
TNPO3-201ENST00000265388 HFM1A2PYH4 1435 aa11.51□□□□□ -0.57
TNPO3-201ENST00000265388 CUL7Q14999 1698 aa11.51□□□□□ -0.57
TNPO3-201ENST00000265388 CHMP7Q8WUX9 453 aaPredicted RBP11.5□□□□□ -0.57
TNPO3-201ENST00000265388 L3MBTL2Q969R5 705 aa11.5□□□□□ -0.57
TNPO3-201ENST00000265388 DNAJC5BQ9UF47 199 aa11.5□□□□□ -0.57
TNPO3-201ENST00000265388 CFDP1Q9UEE9 299 aaPredicted RBP11.5□□□□□ -0.57
TNPO3-201ENST00000265388 CFAP43Q8NDM7 1665 aa11.5□□□□□ -0.57
TNPO3-201ENST00000265388 URB2Q14146 1524 aaKnown RBP11.49□□□□□ -0.57
TNPO3-201ENST00000265388 NAIPQ13075 1403 aa11.48□□□□□ -0.57
TNPO3-201ENST00000265388 PTPRKQ15262 1439 aa11.47□□□□□ -0.57
TNPO3-201ENST00000265388 EHBP1L1Q8N3D4 1523 aa11.46□□□□□ -0.58
TNPO3-201ENST00000265388 SENP3-EIF4A1A0A087X0R7 540 aa11.45□□□□□ -0.58
TNPO3-201ENST00000265388 KDM2AQ9Y2K7 1162 aa11.44□□□□□ -0.58
TNPO3-201ENST00000265388 ANP32EQ9BTT0 268 aa11.44□□□□□ -0.58
TNPO3-201ENST00000265388 SUPT6HQ7KZ85 1726 aaKnown RBP11.44□□□□□ -0.58
TNPO3-201ENST00000265388 ZNF644Q9H582 1327 aaPredicted RBP11.43□□□□□ -0.58
TNPO3-201ENST00000265388 SNAPC4Q5SXM2 1469 aa11.43□□□□□ -0.58
TNPO3-201ENST00000265388 CTTNBP2Q8WZ74 1663 aa11.43□□□□□ -0.58
TNPO3-201ENST00000265388 LAMC3Q9Y6N6 1575 aa11.43□□□□□ -0.58
TNPO3-201ENST00000265388 WASHC2AQ641Q2 1341 aa11.43□□□□□ -0.58
TNPO3-201ENST00000265388 PTPN23Q9H3S7 1636 aa11.42□□□□□ -0.58
TNPO3-201ENST00000265388 RBM19Q9Y4C8 960 aaKnown RBP11.42□□□□□ -0.58
TNPO3-201ENST00000265388 TSPY4P0CV99 314 aa11.41□□□□□ -0.58
TNPO3-201ENST00000265388 TSPY10P0CW01 314 aa11.41□□□□□ -0.58
TNPO3-201ENST00000265388 PRKCSHP14314 528 aaPredicted RBP11.41□□□□□ -0.58
TNPO3-201ENST00000265388 PLEKHD1A6NEE1 506 aa11.41□□□□□ -0.58
TNPO3-201ENST00000265388 CDK13Q14004 1512 aaKnown RBP11.41□□□□□ -0.58
TNPO3-201ENST00000265388 GRIN2BQ13224 1484 aa11.4□□□□□ -0.58
TNPO3-201ENST00000265388 BCL11AQ9H165 835 aa11.4□□□□□ -0.58
TNPO3-201ENST00000265388 PKD2Q13563 968 aa11.39□□□□□ -0.59
TNPO3-201ENST00000265388 TMC1Q8TDI8 760 aa11.39□□□□□ -0.59
TNPO3-201ENST00000265388 EPRSP07814 1512 aaKnown RBP11.38□□□□□ -0.59
TNPO3-201ENST00000265388 HECW1Q76N89 1606 aa11.38□□□□□ -0.59
TNPO3-201ENST00000265388 PRKRIP1Q9H875 184 aaPredicted RBP11.37□□□□□ -0.59
TNPO3-201ENST00000265388 ERCC6Q03468 1493 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms