RNA–Protein interactions for RNA: ENST00000265388.9

TNPO3-201, Transcript of transportin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNPO3, Length 4,153 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO3-201ENST00000265388 NISCHQ9Y2I1 1504 aa16.48■□□□□ 0.23
TNPO3-201ENST00000265388 SHROOM4Q9ULL8 1493 aa14.63□□□□□ -0.07
TNPO3-201ENST00000265388 DCAF8L2P0C7V8 631 aa14.48□□□□□ -0.09
TNPO3-201ENST00000265388 SUPT5HO00267 1087 aaKnown RBP14.48□□□□□ -0.09
TNPO3-201ENST00000265388 ZCCHC6Q5VYS8 1495 aaKnown RBP13.88□□□□□ -0.19
TNPO3-201ENST00000265388 CCDC180Q9P1Z9 1646 aa13.79□□□□□ -0.2
TNPO3-201ENST00000265388 CHIC1Q5VXU3 224 aa13.78□□□□□ -0.2
TNPO3-201ENST00000265388 PCGF6Q9BYE7 350 aa13.68□□□□□ -0.22
TNPO3-201ENST00000265388 MYO15BQ96JP2 1530 aa13.52□□□□□ -0.25
TNPO3-201ENST00000265388 LOC105371045A0A1W2PR82 267 aa13.51□□□□□ -0.25
TNPO3-201ENST00000265388 HRCP23327 699 aa13.5□□□□□ -0.25
TNPO3-201ENST00000265388 EHMT2Q96KQ7 1210 aa13.5□□□□□ -0.25
TNPO3-201ENST00000265388 FAM9AQ8IZU1 332 aaPredicted RBP13.46□□□□□ -0.25
TNPO3-201ENST00000265388 TRIM41Q8WV44 630 aa13.4□□□□□ -0.26
TNPO3-201ENST00000265388 DCAF1Q9Y4B6 1507 aa13.33□□□□□ -0.28
TNPO3-201ENST00000265388 PPARGC1BQ86YN6 1023 aaKnown RBP13.31□□□□□ -0.28
TNPO3-201ENST00000265388 SCRIBQ14160 1630 aa13.27□□□□□ -0.29
TNPO3-201ENST00000265388 TRIM26Q12899 539 aaPredicted RBP13.26□□□□□ -0.29
TNPO3-201ENST00000265388 ABCC9O60706 1549 aa13.23□□□□□ -0.29
TNPO3-201ENST00000265388 RSF1Q96T23 1441 aaPredicted RBP13.14□□□□□ -0.31
TNPO3-201ENST00000265388 ZEB1P37275 1124 aaPredicted RBP13.08□□□□□ -0.32
TNPO3-201ENST00000265388 TTBK1Q5TCY1 1321 aaPredicted RBP13.06□□□□□ -0.32
TNPO3-201ENST00000265388 RB1CC1Q8TDY2 1594 aa12.96□□□□□ -0.33
TNPO3-201ENST00000265388 CECR2Q9BXF3 1484 aa12.94□□□□□ -0.34
TNPO3-201ENST00000265388 CCER1Q8TC90 406 aaPredicted RBP12.93□□□□□ -0.34
TNPO3-201ENST00000265388 NACADO15069 1562 aa12.9□□□□□ -0.34
TNPO3-201ENST00000265388 UBTFP17480 764 aaKnown RBP12.88□□□□□ -0.35
TNPO3-201ENST00000265388 MROH2BQ7Z745 1585 aa12.85□□□□□ -0.35
TNPO3-201ENST00000265388 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.83□□□□□ -0.36
TNPO3-201ENST00000265388 PABPN1Q86U42 306 aaKnown RBP eCLIP12.82□□□□□ -0.363e-6■■□□□ 12.4
TNPO3-201ENST00000265388 RANGAP1P46060 587 aaPredicted RBP12.78□□□□□ -0.36
TNPO3-201ENST00000265388 WIZO95785 1651 aa12.75□□□□□ -0.37
TNPO3-201ENST00000265388 APLP2Q06481 763 aa12.74□□□□□ -0.37
TNPO3-201ENST00000265388 BAZ1AQ9NRL2 1556 aaPredicted RBP12.7□□□□□ -0.38
TNPO3-201ENST00000265388 CSRNP3Q8WYN3 585 aa12.66□□□□□ -0.38
TNPO3-201ENST00000265388 HNRNPUL2Q1KMD3 747 aaKnown RBP12.62□□□□□ -0.39
TNPO3-201ENST00000265388 ABCC8Q09428 1581 aa12.61□□□□□ -0.39
TNPO3-201ENST00000265388 CENPBP07199 599 aaPredicted RBP12.59□□□□□ -0.39
TNPO3-201ENST00000265388 CCDC88BA6NC98 1476 aa12.58□□□□□ -0.39
TNPO3-201ENST00000265388 CEP162Q5TB80 1403 aa12.57□□□□□ -0.4
TNPO3-201ENST00000265388 DIEXFQ68CQ4 756 aaKnown RBP12.57□□□□□ -0.4
TNPO3-201ENST00000265388 SOGA1O94964 1423 aa12.56□□□□□ -0.4
TNPO3-201ENST00000265388 TOP2AP11388 1531 aaKnown RBP12.55□□□□□ -0.4
TNPO3-201ENST00000265388 YTHDC1Q96MU7 727 aaKnown RBP12.51□□□□□ -0.41
TNPO3-201ENST00000265388 SMARCA4P51532 1647 aa12.51□□□□□ -0.41
TNPO3-201ENST00000265388 TNIKQ9UKE5 1360 aa12.5□□□□□ -0.41
TNPO3-201ENST00000265388 EEA1Q15075 1411 aa12.48□□□□□ -0.41
TNPO3-201ENST00000265388 WRNQ14191 1432 aaPredicted RBP eCLIP12.48□□□□□ -0.413e-7■■■■■ 36.2
TNPO3-201ENST00000265388 SCAF1Q9H7N4 1312 aaKnown RBP12.46□□□□□ -0.41
TNPO3-201ENST00000265388 GOLGA3Q08378 1498 aa12.46□□□□□ -0.42
TNPO3-201ENST00000265388 PELP1Q8IZL8 1130 aaKnown RBP12.45□□□□□ -0.42
TNPO3-201ENST00000265388 SMARCA2P51531 1590 aa12.45□□□□□ -0.42
TNPO3-201ENST00000265388 RUSC2Q8N2Y8 1516 aa12.42□□□□□ -0.42
TNPO3-201ENST00000265388 ACIN1Q9UKV3 1341 aaKnown RBP12.42□□□□□ -0.42
TNPO3-201ENST00000265388 ZNF316A6NFI3 1004 aaPredicted RBP12.41□□□□□ -0.42
TNPO3-201ENST00000265388 CLIP1P30622 1438 aa12.4□□□□□ -0.42
TNPO3-201ENST00000265388 BAZ1BQ9UIG0 1483 aaKnown RBP12.38□□□□□ -0.43
TNPO3-201ENST00000265388 ITGAEP38570 1179 aa12.37□□□□□ -0.43
TNPO3-201ENST00000265388 NEUROD1Q13562 356 aa12.37□□□□□ -0.43
TNPO3-201ENST00000265388 GTF3C3Q9Y5Q9 886 aa12.37□□□□□ -0.43
TNPO3-201ENST00000265388 CEP164Q9UPV0 1460 aa12.36□□□□□ -0.43
TNPO3-201ENST00000265388 ATP1B4Q9UN42 357 aaPredicted RBP12.35□□□□□ -0.43
TNPO3-201ENST00000265388 EIF4G1Q04637 1599 aaKnown RBP12.31□□□□□ -0.44
TNPO3-201ENST00000265388 ATAD2BQ9ULI0 1458 aa12.27□□□□□ -0.45
TNPO3-201ENST00000265388 VPS8Q8N3P4 1428 aa12.24□□□□□ -0.45
TNPO3-201ENST00000265388 UNC13AQ9UPW8 1703 aa12.23□□□□□ -0.45
TNPO3-201ENST00000265388 RAPGEF2Q9Y4G8 1499 aa12.22□□□□□ -0.45
TNPO3-201ENST00000265388 MIER1Q8N108 512 aa12.21□□□□□ -0.45
TNPO3-201ENST00000265388 SYNJ1O43426 1573 aa12.2□□□□□ -0.46
TNPO3-201ENST00000265388 BICRAQ9NZM4 1560 aa12.19□□□□□ -0.46
TNPO3-201ENST00000265388 FAM50AQ14320 339 aaKnown RBP12.16□□□□□ -0.46
TNPO3-201ENST00000265388 P3H3Q8IVL6 736 aa12.15□□□□□ -0.46
TNPO3-201ENST00000265388 KIF27Q86VH2 1401 aa12.14□□□□□ -0.47
TNPO3-201ENST00000265388 KANK4Q5T7N3 995 aaPredicted RBP12.12□□□□□ -0.47
TNPO3-201ENST00000265388 KIF21BO75037 1637 aa12.12□□□□□ -0.47
TNPO3-201ENST00000265388 PEG3Q9GZU2 1588 aa12.07□□□□□ -0.48
TNPO3-201ENST00000265388 MYT1Q01538 1121 aa12.04□□□□□ -0.48
TNPO3-201ENST00000265388 CUX2O14529 1486 aa12.03□□□□□ -0.48
TNPO3-201ENST00000265388 CCNB3Q8WWL7 1395 aa12.02□□□□□ -0.49
TNPO3-201ENST00000265388 TOP2BQ02880 1626 aa12.01□□□□□ -0.49
TNPO3-201ENST00000265388 CLSPNQ9HAW4 1339 aa12.01□□□□□ -0.49
TNPO3-201ENST00000265388 DHX57Q6P158 1386 aaKnown RBP11.99□□□□□ -0.49
TNPO3-201ENST00000265388 CARMIL1Q5VZK9 1371 aa11.97□□□□□ -0.49
TNPO3-201ENST00000265388 PRXQ9BXM0 1461 aa11.97□□□□□ -0.49
TNPO3-201ENST00000265388 NCAPD3P42695 1498 aa11.96□□□□□ -0.49
TNPO3-201ENST00000265388 ARAP1Q96P48 1450 aa11.96□□□□□ -0.49
TNPO3-201ENST00000265388 ERICH3Q5RHP9 1530 aa11.95□□□□□ -0.5
TNPO3-201ENST00000265388 CUX1P39880 1505 aa11.94□□□□□ -0.5
TNPO3-201ENST00000265388 NEFLP07196 543 aa11.93□□□□□ -0.5
TNPO3-201ENST00000265388 DDX10Q13206 875 aaKnown RBP11.93□□□□□ -0.5
TNPO3-201ENST00000265388 SIN3AQ96ST3 1273 aa11.91□□□□□ -0.5
TNPO3-201ENST00000265388 RAB3GAP2Q9H2M9 1393 aa11.9□□□□□ -0.5
TNPO3-201ENST00000265388 CADPSQ9ULU8 1353 aa11.9□□□□□ -0.5
TNPO3-201ENST00000265388 BCANQ96GW7 911 aa11.9□□□□□ -0.5
TNPO3-201ENST00000265388 HIRIP3Q9BW71 556 aaPredicted RBP11.9□□□□□ -0.5
TNPO3-201ENST00000265388 CFTRP13569 1480 aa11.9□□□□□ -0.51
TNPO3-201ENST00000265388 HMGXB3Q12766 1538 aa11.89□□□□□ -0.51
TNPO3-201ENST00000265388 IGF1RP08069 1367 aa11.89□□□□□ -0.51
TNPO3-201ENST00000265388 ARHGAP35Q9NRY4 1499 aa11.89□□□□□ -0.51
TNPO3-201ENST00000265388 BIVM-ERCC5R4GMW8 1640 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms