RNA–Protein interactions for RNA: ENST00000265388.9

TNPO3-201, Transcript of transportin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNPO3, Length 4,153 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO3-201ENST00000265388 DDX6P26196 483 aaKnown RBP eCLIP7.97□□□□□ -1.131e-21■□□□□ 8.1
TNPO3-201ENST00000265388 RBM22Q9NW64 420 aaKnown RBP eCLIP8.52□□□□□ -1.056e-15■■■■■ 41.7
TNPO3-201ENST00000265388 SMNDC1O75940 238 aaKnown RBP eCLIP8.59□□□□□ -1.032e-14■■■□□ 14.7
TNPO3-201ENST00000265388 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.82□□□□□ -13e-14■■■■■ 27
TNPO3-201ENST00000265388 ZC3H11AO75152 810 aaKnown RBP eCLIP8.86□□□□□ -0.997e-12■□□□□ 11
TNPO3-201ENST00000265388 SF3A3Q12874 501 aaKnown RBP eCLIP9.13□□□□□ -0.953e-11■■■■■ 74.1
TNPO3-201ENST00000265388 PABPC4Q13310 644 aaKnown RBP eCLIP9.23□□□□□ -0.933e-9■□□□□ 10.3
TNPO3-201ENST00000265388 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.96□□□□□ -1.143e-9■■□□□ 11.8
TNPO3-201ENST00000265388 YBX3P16989 372 aaKnown RBP eCLIP8.55□□□□□ -1.043e-9■■■■■ 31.8
TNPO3-201ENST00000265388 UPF1Q92900 1129 aaKnown RBP eCLIP8.23□□□□□ -1.097e-9■■■■■ 43.6
TNPO3-201ENST00000265388 FXR2P51116 673 aaKnown RBP eCLIP9.2□□□□□ -0.942e-8■■■■■ 33.3
TNPO3-201ENST00000265388 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.56□□□□□ -0.883e-8■□□□□ 10.4
TNPO3-201ENST00000265388 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.1□□□□□ -0.954e-8■■■■■ 31
TNPO3-201ENST00000265388 QKIQ96PU8 341 aaKnown RBP eCLIP8.6□□□□□ -1.035e-8■■■■■ 55.6
TNPO3-201ENST00000265388 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.79□□□□□ -0.681e-7■■■■■ 31.2
TNPO3-201ENST00000265388 TIA1P31483 386 aaKnown RBP eCLIP8.07□□□□□ -1.121e-7■■□□□ 13.1
TNPO3-201ENST00000265388 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.59□□□□□ -1.352e-7■■■■□ 23.4
TNPO3-201ENST00000265388 METAP2P50579 478 aaKnown RBP eCLIP9.73□□□□□ -0.852e-7■■□□□ 12.5
TNPO3-201ENST00000265388 WRNQ14191 1432 aaPredicted RBP eCLIP12.48□□□□□ -0.413e-7■■■■■ 36.2
TNPO3-201ENST00000265388 PPIGQ13427 754 aaKnown RBP eCLIP8.07□□□□□ -1.123e-7■■■■■ 28.4
TNPO3-201ENST00000265388 HNRNPCP07910 306 aaKnown RBP eCLIP8.35□□□□□ -1.073e-7■■■■□ 19.5
TNPO3-201ENST00000265388 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.65□□□□□ -1.023e-7■□□□□ 9.3
TNPO3-201ENST00000265388 PTBP1P26599 531 aaKnown RBP eCLIP7.74□□□□□ -1.173e-7■■■■□ 24.4
TNPO3-201ENST00000265388 KHSRPQ92945 711 aaKnown RBP eCLIP8.51□□□□□ -1.053e-7■■□□□ 11.6
TNPO3-201ENST00000265388 PCBP2Q15366 365 aaKnown RBP eCLIP8.19□□□□□ -1.13e-7■■■□□ 16.2
TNPO3-201ENST00000265388 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.41□□□□□ -1.064e-7■■■□□ 15.9
TNPO3-201ENST00000265388 ZNF622Q969S3 477 aaKnown RBP eCLIP9.24□□□□□ -0.934e-7■□□□□ 9.1
TNPO3-201ENST00000265388 AQRO60306 1485 aaKnown RBP eCLIP11.52□□□□□ -0.574e-7■■■■□ 25.8
TNPO3-201ENST00000265388 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.17□□□□□ -0.945e-7■■■■■ 61.8
TNPO3-201ENST00000265388 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.79□□□□□ -0.846e-7■■■□□ 17.8
TNPO3-201ENST00000265388 MATR3P43243 847 aaKnown RBP eCLIP9.4□□□□□ -0.97e-7■■■■□ 21.6
TNPO3-201ENST00000265388 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.39□□□□□ -1.237e-7■■■□□ 18.7
TNPO3-201ENST00000265388 U2AF2P26368 475 aaKnown RBP eCLIP9.69□□□□□ -0.867e-7■■■■■ 27.1
TNPO3-201ENST00000265388 FMR1Q06787 632 aaKnown RBP eCLIP9.49□□□□□ -0.898e-7■□□□□ 9.7
TNPO3-201ENST00000265388 AKAP1Q92667 903 aaKnown RBP eCLIP7.81□□□□□ -1.168e-7■□□□□ 9.9
TNPO3-201ENST00000265388 CDC40O60508 579 aaKnown RBP eCLIP7.66□□□□□ -1.189e-7■■■□□ 18.5
TNPO3-201ENST00000265388 RBM15Q96T37 977 aaKnown RBP eCLIP8.9□□□□□ -0.999e-7■■□□□ 14.5
TNPO3-201ENST00000265388 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.65□□□□□ -0.711e-6■■■□□ 16.7
TNPO3-201ENST00000265388 HNRNPMP52272 730 aaKnown RBP eCLIP11.28□□□□□ -0.61e-6■■■■□ 20.8
TNPO3-201ENST00000265388 SF3B4Q15427 424 aaKnown RBP eCLIP7.91□□□□□ -1.141e-6■■■■□ 21.7
TNPO3-201ENST00000265388 TARDBPQ13148 414 aaKnown RBP eCLIP8.03□□□□□ -1.121e-6■■■□□ 17.1
TNPO3-201ENST00000265388 EFTUD2Q15029 972 aaKnown RBP eCLIP8.77□□□□□ -12e-6■■■■■ 27.7
TNPO3-201ENST00000265388 GPKOWQ92917 476 aaPredicted RBP eCLIP9.47□□□□□ -0.892e-6■■■□□ 17.4
TNPO3-201ENST00000265388 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.36□□□□□ -0.592e-6■■■■■ 28.5
TNPO3-201ENST00000265388 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.74□□□□□ -0.853e-6■■□□□ 13.2
TNPO3-201ENST00000265388 SF3B1O75533 1304 aaKnown RBP eCLIP8.47□□□□□ -1.053e-6■■■■■ 90.3
TNPO3-201ENST00000265388 RPS3P23396 243 aaKnown RBP eCLIP8.14□□□□□ -1.113e-6■■■□□ 16.9
TNPO3-201ENST00000265388 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.03□□□□□ -0.963e-6■■■■■ 50.8
TNPO3-201ENST00000265388 HNRNPLP14866 589 aaKnown RBP eCLIP8.5□□□□□ -1.053e-6■■□□□ 11.6
TNPO3-201ENST00000265388 PABPN1Q86U42 306 aaKnown RBP eCLIP12.82□□□□□ -0.363e-6■■□□□ 12.4
TNPO3-201ENST00000265388 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.93□□□□□ -0.825e-6■■■□□ 19.2
TNPO3-201ENST00000265388 AARSP49588 968 aaKnown RBP eCLIP9.14□□□□□ -0.956e-6■□□□□ 8
TNPO3-201ENST00000265388 FXR1P51114 621 aaKnown RBP eCLIP9.4□□□□□ -0.916e-6■■■□□ 17.1
Retrieved 53 of 53 RNA–protein pairs in 10.1 ms