RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 RAPGEF2Q9Y4G8 1499 aa12.1□□□□□ -0.47
DEPDC1B-201ENST00000265036 CSRNP3Q8WYN3 585 aa12.08□□□□□ -0.48
DEPDC1B-201ENST00000265036 PRXQ9BXM0 1461 aa12.07□□□□□ -0.48
DEPDC1B-201ENST00000265036 ARAP1Q96P48 1450 aa12.07□□□□□ -0.48
DEPDC1B-201ENST00000265036 SHROOM2Q13796 1616 aa12.06□□□□□ -0.48
DEPDC1B-201ENST00000265036 CYB5RLQ6IPT4 315 aa12.05□□□□□ -0.48
DEPDC1B-201ENST00000265036 EEA1Q15075 1411 aa12.05□□□□□ -0.48
DEPDC1B-201ENST00000265036 IQGAP2Q13576 1575 aa12.04□□□□□ -0.48
DEPDC1B-201ENST00000265036 CTTNBP2Q8WZ74 1663 aa12.04□□□□□ -0.48
DEPDC1B-201ENST00000265036 KIAA0586Q9BVV6 1533 aa12.04□□□□□ -0.48
DEPDC1B-201ENST00000265036 PRG4Q92954 1404 aaPredicted RBP12.03□□□□□ -0.48
DEPDC1B-201ENST00000265036 TTBK1Q5TCY1 1321 aaPredicted RBP12.03□□□□□ -0.48
DEPDC1B-201ENST00000265036 JPH4Q96JJ6 628 aa12.03□□□□□ -0.48
DEPDC1B-201ENST00000265036 RANGAP1P46060 587 aaPredicted RBP12.01□□□□□ -0.49
DEPDC1B-201ENST00000265036 KIF21BO75037 1637 aa11.99□□□□□ -0.49
DEPDC1B-201ENST00000265036 DISP1Q96F81 1524 aa11.94□□□□□ -0.5
DEPDC1B-201ENST00000265036 UBTFP17480 764 aaKnown RBP11.94□□□□□ -0.5
DEPDC1B-201ENST00000265036 GOLGA3Q08378 1498 aa11.93□□□□□ -0.5
DEPDC1B-201ENST00000265036 KIAA0556O60303 1618 aa11.93□□□□□ -0.5
DEPDC1B-201ENST00000265036 UGGT2Q9NYU1 1516 aa11.93□□□□□ -0.5
DEPDC1B-201ENST00000265036 P3H3Q8IVL6 736 aa11.92□□□□□ -0.5
DEPDC1B-201ENST00000265036 CARMIL2Q6F5E8 1435 aa11.91□□□□□ -0.5
DEPDC1B-201ENST00000265036 PTPRGP23470 1445 aa11.87□□□□□ -0.51
DEPDC1B-201ENST00000265036 TNIKQ9UKE5 1360 aa11.87□□□□□ -0.51
DEPDC1B-201ENST00000265036 ADCY10Q96PN6 1610 aa11.87□□□□□ -0.51
DEPDC1B-201ENST00000265036 SAMD9Q5K651 1589 aa11.85□□□□□ -0.51
DEPDC1B-201ENST00000265036 FHOD3Q2V2M9 1422 aa11.85□□□□□ -0.51
DEPDC1B-201ENST00000265036 PLB1Q6P1J6 1458 aa11.83□□□□□ -0.52
DEPDC1B-201ENST00000265036 ARID3CA6NKF2 412 aa11.83□□□□□ -0.52
DEPDC1B-201ENST00000265036 LOC105371045A0A1W2PR82 267 aa11.82□□□□□ -0.52
DEPDC1B-201ENST00000265036 TRHP20396 242 aaPredicted RBP11.8□□□□□ -0.52
DEPDC1B-201ENST00000265036 UACAQ9BZF9 1416 aa11.79□□□□□ -0.52
DEPDC1B-201ENST00000265036 ABCC2Q92887 1545 aa11.79□□□□□ -0.52
DEPDC1B-201ENST00000265036 ARHGAP35Q9NRY4 1499 aa11.79□□□□□ -0.52
DEPDC1B-201ENST00000265036 EFCAB5A4FU69 1503 aa11.78□□□□□ -0.52
DEPDC1B-201ENST00000265036 ABCA8O94911 1581 aa11.76□□□□□ -0.53
DEPDC1B-201ENST00000265036 NPM1P06748 294 aaKnown RBP eCLIP11.76□□□□□ -0.53
DEPDC1B-201ENST00000265036 ZCCHC11Q5TAX3 1644 aaKnown RBP11.75□□□□□ -0.53
DEPDC1B-201ENST00000265036 RAPGEF6Q8TEU7 1601 aa11.74□□□□□ -0.53
DEPDC1B-201ENST00000265036 CLIP1P30622 1438 aa11.74□□□□□ -0.53
DEPDC1B-201ENST00000265036 UHRF1BP1LA0JNW5 1464 aa11.73□□□□□ -0.53
DEPDC1B-201ENST00000265036 ATP1B4Q9UN42 357 aaPredicted RBP11.72□□□□□ -0.53
DEPDC1B-201ENST00000265036 CEP162Q5TB80 1403 aa11.72□□□□□ -0.53
DEPDC1B-201ENST00000265036 KIF13AQ9H1H9 1805 aa11.72□□□□□ -0.53
DEPDC1B-201ENST00000265036 MAPKBP1O60336 1514 aa11.71□□□□□ -0.53
DEPDC1B-201ENST00000265036 KDM5BQ9UGL1 1544 aa11.71□□□□□ -0.53
DEPDC1B-201ENST00000265036 ASXL2Q76L83 1435 aa11.7□□□□□ -0.54
DEPDC1B-201ENST00000265036 NUP153P49790 1475 aaKnown RBP11.7□□□□□ -0.54
DEPDC1B-201ENST00000265036 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.7□□□□□ -0.54
DEPDC1B-201ENST00000265036 HNRNPUL2Q1KMD3 747 aaKnown RBP11.7□□□□□ -0.54
DEPDC1B-201ENST00000265036 PCF11O94913 1555 aaKnown RBP11.69□□□□□ -0.54
DEPDC1B-201ENST00000265036 DIP2BQ9P265 1576 aa11.69□□□□□ -0.54
DEPDC1B-201ENST00000265036 CDK13Q14004 1512 aaKnown RBP11.68□□□□□ -0.54
DEPDC1B-201ENST00000265036 TSPOAP1O95153 1857 aa11.68□□□□□ -0.54
DEPDC1B-201ENST00000265036 FMN1Q68DA7 1419 aa11.67□□□□□ -0.54
DEPDC1B-201ENST00000265036 FAM69CQ0P6D2 419 aa11.67□□□□□ -0.54
DEPDC1B-201ENST00000265036 ATP10BO94823 1461 aa11.67□□□□□ -0.54
DEPDC1B-201ENST00000265036 LRRIQ1Q96JM4 1722 aa11.66□□□□□ -0.54
DEPDC1B-201ENST00000265036 ABCC10Q5T3U5 1492 aa11.66□□□□□ -0.54
DEPDC1B-201ENST00000265036 HECW1Q76N89 1606 aa11.65□□□□□ -0.54
DEPDC1B-201ENST00000265036 KCNH8Q96L42 1107 aa11.65□□□□□ -0.54
DEPDC1B-201ENST00000265036 WDR7Q9Y4E6 1490 aa11.65□□□□□ -0.54
DEPDC1B-201ENST00000265036 EPRSP07814 1512 aaKnown RBP11.62□□□□□ -0.55
DEPDC1B-201ENST00000265036 CASKIN1Q8WXD9 1431 aa11.59□□□□□ -0.55
DEPDC1B-201ENST00000265036 FYCO1Q9BQS8 1478 aa11.58□□□□□ -0.56
DEPDC1B-201ENST00000265036 PPRC1Q5VV67 1664 aaKnown RBP11.57□□□□□ -0.56
DEPDC1B-201ENST00000265036 MAP3K4Q9Y6R4 1608 aa11.56□□□□□ -0.56
DEPDC1B-201ENST00000265036 KIF14Q15058 1648 aa11.56□□□□□ -0.56
DEPDC1B-201ENST00000265036 GLI2P10070 1586 aa11.56□□□□□ -0.56
DEPDC1B-201ENST00000265036 MAGI3Q5TCQ9 1506 aa11.55□□□□□ -0.56
DEPDC1B-201ENST00000265036 PLEKHD1A6NEE1 506 aa11.55□□□□□ -0.56
DEPDC1B-201ENST00000265036 TTC37Q6PGP7 1564 aa11.55□□□□□ -0.56
DEPDC1B-201ENST00000265036 VPS8Q8N3P4 1428 aa11.54□□□□□ -0.56
DEPDC1B-201ENST00000265036 CFAP43Q8NDM7 1665 aa11.54□□□□□ -0.56
DEPDC1B-201ENST00000265036 CCDC18Q5T9S5 1454 aa11.53□□□□□ -0.56
DEPDC1B-201ENST00000265036 ABCA9Q8IUA7 1624 aa11.53□□□□□ -0.56
DEPDC1B-201ENST00000265036 CD109Q6YHK3 1445 aa11.52□□□□□ -0.56
DEPDC1B-201ENST00000265036 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.52□□□□□ -0.57
DEPDC1B-201ENST00000265036 TROQ12816 1431 aaPredicted RBP11.5□□□□□ -0.57
DEPDC1B-201ENST00000265036 KDM6BO15054 1643 aa11.5□□□□□ -0.57
DEPDC1B-201ENST00000265036 CDK11AQ9UQ88 783 aaPredicted RBP11.5□□□□□ -0.57
DEPDC1B-201ENST00000265036 MTUS2Q5JR59 1369 aa11.47□□□□□ -0.57
DEPDC1B-201ENST00000265036 TIAM1Q13009 1591 aa11.47□□□□□ -0.57
DEPDC1B-201ENST00000265036 MYO5CQ9NQX4 1742 aa11.47□□□□□ -0.57
DEPDC1B-201ENST00000265036 TEX14Q8IWB6 1497 aa11.47□□□□□ -0.57
DEPDC1B-201ENST00000265036 COL17A1Q9UMD9 1497 aaPredicted RBP11.46□□□□□ -0.57
DEPDC1B-201ENST00000265036 EHBP1L1Q8N3D4 1523 aa11.44□□□□□ -0.58
DEPDC1B-201ENST00000265036 FANCAO15360 1455 aa11.44□□□□□ -0.58
DEPDC1B-201ENST00000265036 ARHGAP5Q13017 1502 aa11.43□□□□□ -0.58
DEPDC1B-201ENST00000265036 CDC42BPAQ5VT25 1732 aa11.43□□□□□ -0.58
DEPDC1B-201ENST00000265036 CDC42BPBQ9Y5S2 1711 aa11.42□□□□□ -0.58
DEPDC1B-201ENST00000265036 KANK4Q5T7N3 995 aaPredicted RBP11.42□□□□□ -0.58
DEPDC1B-201ENST00000265036 PREX2Q70Z35 1606 aa11.41□□□□□ -0.58
DEPDC1B-201ENST00000265036 LRRC9Q6ZRR7 1453 aa11.4□□□□□ -0.58
DEPDC1B-201ENST00000265036 APLP2Q06481 763 aa11.4□□□□□ -0.58
DEPDC1B-201ENST00000265036 PPARGC1BQ86YN6 1023 aaKnown RBP11.4□□□□□ -0.58
DEPDC1B-201ENST00000265036 PLCH2O75038 1416 aa11.4□□□□□ -0.58
DEPDC1B-201ENST00000265036 SUPT6HQ7KZ85 1726 aaKnown RBP11.4□□□□□ -0.59
DEPDC1B-201ENST00000265036 RAPGEF3O95398 923 aa11.4□□□□□ -0.59
DEPDC1B-201ENST00000265036 ZNF777Q9ULD5 760 aaPredicted RBP11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms