RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 NISCHQ9Y2I1 1504 aa17.45■□□□□ 0.38
DEPDC1B-201ENST00000265036 CCDC180Q9P1Z9 1646 aa15.46■□□□□ 0.07
DEPDC1B-201ENST00000265036 ABCC9O60706 1549 aa15.18■□□□□ 0.02
DEPDC1B-201ENST00000265036 DCAF8L2P0C7V8 631 aa14.68□□□□□ -0.06
DEPDC1B-201ENST00000265036 ZCCHC6Q5VYS8 1495 aaKnown RBP14.57□□□□□ -0.08
DEPDC1B-201ENST00000265036 RB1CC1Q8TDY2 1594 aa14.53□□□□□ -0.08
DEPDC1B-201ENST00000265036 NACADO15069 1562 aa14.49□□□□□ -0.09
DEPDC1B-201ENST00000265036 MYO15BQ96JP2 1530 aa14.36□□□□□ -0.11
DEPDC1B-201ENST00000265036 DCAF1Q9Y4B6 1507 aa14.35□□□□□ -0.11
DEPDC1B-201ENST00000265036 UNC13AQ9UPW8 1703 aa14.29□□□□□ -0.12
DEPDC1B-201ENST00000265036 SCRIBQ14160 1630 aa14.24□□□□□ -0.13
DEPDC1B-201ENST00000265036 PABPN1Q86U42 306 aaKnown RBP eCLIP14.2□□□□□ -0.14
DEPDC1B-201ENST00000265036 BICRAQ9NZM4 1560 aa14.12□□□□□ -0.15
DEPDC1B-201ENST00000265036 SHROOM4Q9ULL8 1493 aa14□□□□□ -0.17
DEPDC1B-201ENST00000265036 DNAJC5BQ9UF47 199 aa13.84□□□□□ -0.19
DEPDC1B-201ENST00000265036 EIF4G1Q04637 1599 aaKnown RBP13.75□□□□□ -0.21
DEPDC1B-201ENST00000265036 CC2D2AQ9P2K1 1620 aa13.69□□□□□ -0.22
DEPDC1B-201ENST00000265036 CECR2Q9BXF3 1484 aa13.66□□□□□ -0.22
DEPDC1B-201ENST00000265036 SMARCA4P51532 1647 aa13.56□□□□□ -0.24
DEPDC1B-201ENST00000265036 BAZ1AQ9NRL2 1556 aaPredicted RBP13.52□□□□□ -0.25
DEPDC1B-201ENST00000265036 MROH2BQ7Z745 1585 aa13.5□□□□□ -0.25
DEPDC1B-201ENST00000265036 ATAD2BQ9ULI0 1458 aa13.43□□□□□ -0.26
DEPDC1B-201ENST00000265036 SMARCA2P51531 1590 aa13.4□□□□□ -0.26
DEPDC1B-201ENST00000265036 WIZO95785 1651 aa13.4□□□□□ -0.27
DEPDC1B-201ENST00000265036 NCAPD3P42695 1498 aa13.36□□□□□ -0.27
DEPDC1B-201ENST00000265036 BAZ1BQ9UIG0 1483 aaKnown RBP13.36□□□□□ -0.27
DEPDC1B-201ENST00000265036 PEG3Q9GZU2 1588 aa13.35□□□□□ -0.27
DEPDC1B-201ENST00000265036 RSF1Q96T23 1441 aaPredicted RBP13.34□□□□□ -0.27
DEPDC1B-201ENST00000265036 HMGXB3Q12766 1538 aa13.33□□□□□ -0.27
DEPDC1B-201ENST00000265036 TOP2AP11388 1531 aaKnown RBP13.19□□□□□ -0.3
DEPDC1B-201ENST00000265036 SUPT5HO00267 1087 aaKnown RBP13.17□□□□□ -0.3
DEPDC1B-201ENST00000265036 NESP48681 1621 aa13.16□□□□□ -0.3
DEPDC1B-201ENST00000265036 ERCC6Q03468 1493 aa13.05□□□□□ -0.32
DEPDC1B-201ENST00000265036 CCDC88BA6NC98 1476 aa13.04□□□□□ -0.32
DEPDC1B-201ENST00000265036 LAMC3Q9Y6N6 1575 aa13.03□□□□□ -0.32
DEPDC1B-201ENST00000265036 KIF21AQ7Z4S6 1674 aa13.01□□□□□ -0.33
DEPDC1B-201ENST00000265036 CADPSQ9ULU8 1353 aa13.01□□□□□ -0.33
DEPDC1B-201ENST00000265036 CFTRP13569 1480 aa12.95□□□□□ -0.34
DEPDC1B-201ENST00000265036 PDS5BQ9NTI5 1447 aa12.93□□□□□ -0.34
DEPDC1B-201ENST00000265036 FANCD2Q9BXW9 1451 aa12.9□□□□□ -0.34
DEPDC1B-201ENST00000265036 THOC2Q8NI27 1593 aaKnown RBP12.9□□□□□ -0.34
DEPDC1B-201ENST00000265036 PRDM2Q13029 1718 aa12.9□□□□□ -0.34
DEPDC1B-201ENST00000265036 CEP164Q9UPV0 1460 aa12.88□□□□□ -0.35
DEPDC1B-201ENST00000265036 MRC2Q9UBG0 1479 aa12.83□□□□□ -0.36
DEPDC1B-201ENST00000265036 URB2Q14146 1524 aaKnown RBP12.79□□□□□ -0.36
DEPDC1B-201ENST00000265036 CUX2O14529 1486 aa12.78□□□□□ -0.36
DEPDC1B-201ENST00000265036 WDR62O43379 1518 aa12.78□□□□□ -0.36
DEPDC1B-201ENST00000265036 TOPBP1Q92547 1522 aa12.71□□□□□ -0.38
DEPDC1B-201ENST00000265036 ABCC8Q09428 1581 aa12.69□□□□□ -0.38
DEPDC1B-201ENST00000265036 DNMBPQ6XZF7 1577 aa12.69□□□□□ -0.38
DEPDC1B-201ENST00000265036 CUX1P39880 1505 aa12.66□□□□□ -0.38
DEPDC1B-201ENST00000265036 POLA1P09884 1462 aaPredicted RBP12.62□□□□□ -0.39
DEPDC1B-201ENST00000265036 FGD5Q6ZNL6 1462 aa12.61□□□□□ -0.39
DEPDC1B-201ENST00000265036 SYNJ1O43426 1573 aa12.6□□□□□ -0.39
DEPDC1B-201ENST00000265036 ZNF608Q9ULD9 1512 aaPredicted RBP12.59□□□□□ -0.39
DEPDC1B-201ENST00000265036 RAD54L2Q9Y4B4 1467 aa12.59□□□□□ -0.39
DEPDC1B-201ENST00000265036 WRNQ14191 1432 aaPredicted RBP eCLIP12.59□□□□□ -0.39
DEPDC1B-201ENST00000265036 IFT140Q96RY7 1462 aa12.56□□□□□ -0.4
DEPDC1B-201ENST00000265036 TARBP1Q13395 1621 aaKnown RBP12.56□□□□□ -0.4
DEPDC1B-201ENST00000265036 EIF4G3O43432 1585 aaKnown RBP12.54□□□□□ -0.4
DEPDC1B-201ENST00000265036 TOP2BQ02880 1626 aa12.54□□□□□ -0.4
DEPDC1B-201ENST00000265036 BIVM-ERCC5R4GMW8 1640 aa12.54□□□□□ -0.4
DEPDC1B-201ENST00000265036 SOGA1O94964 1423 aa12.53□□□□□ -0.4
DEPDC1B-201ENST00000265036 AQRO60306 1485 aaKnown RBP eCLIP12.52□□□□□ -0.412e-7■■■■■ 29
DEPDC1B-201ENST00000265036 TDRD9Q8NDG6 1382 aaKnown RBP12.51□□□□□ -0.41
DEPDC1B-201ENST00000265036 WDR97A6NE52 1622 aa12.49□□□□□ -0.41
DEPDC1B-201ENST00000265036 ABCA10Q8WWZ4 1543 aa12.43□□□□□ -0.42
DEPDC1B-201ENST00000265036 PBRM1Q86U86 1689 aa12.42□□□□□ -0.42
DEPDC1B-201ENST00000265036 ABCA5Q8WWZ7 1642 aa12.41□□□□□ -0.42
DEPDC1B-201ENST00000265036 GAPVD1Q14C86 1478 aa12.4□□□□□ -0.42
DEPDC1B-201ENST00000265036 SNAPC4Q5SXM2 1469 aa12.4□□□□□ -0.42
DEPDC1B-201ENST00000265036 CHD1O14646 1710 aa12.39□□□□□ -0.43
DEPDC1B-201ENST00000265036 FBLN2P98095 1184 aa12.39□□□□□ -0.43
DEPDC1B-201ENST00000265036 GRIN2BQ13224 1484 aa12.37□□□□□ -0.43
DEPDC1B-201ENST00000265036 TRIM41Q8WV44 630 aa12.36□□□□□ -0.43
DEPDC1B-201ENST00000265036 DNAJC5Q9H3Z4 198 aa12.32□□□□□ -0.44
DEPDC1B-201ENST00000265036 MAGI1Q96QZ7 1491 aaPredicted RBP12.32□□□□□ -0.44
DEPDC1B-201ENST00000265036 ADAMTS12P58397 1594 aa12.31□□□□□ -0.44
DEPDC1B-201ENST00000265036 RUSC2Q8N2Y8 1516 aa12.3□□□□□ -0.44
DEPDC1B-201ENST00000265036 KIF27Q86VH2 1401 aa12.29□□□□□ -0.44
DEPDC1B-201ENST00000265036 CHMP7Q8WUX9 453 aaPredicted RBP12.29□□□□□ -0.44
DEPDC1B-201ENST00000265036 OSCARQ8IYS5 282 aa12.29□□□□□ -0.44
DEPDC1B-201ENST00000265036 SYNJ2O15056 1496 aa12.29□□□□□ -0.44
DEPDC1B-201ENST00000265036 ERICH3Q5RHP9 1530 aa12.28□□□□□ -0.44
DEPDC1B-201ENST00000265036 CHIC1Q5VXU3 224 aa12.26□□□□□ -0.45
DEPDC1B-201ENST00000265036 GRIN2AQ12879 1464 aa12.24□□□□□ -0.45
DEPDC1B-201ENST00000265036 FHAD1B1AJZ9 1412 aa12.23□□□□□ -0.45
DEPDC1B-201ENST00000265036 IGF1RP08069 1367 aa12.22□□□□□ -0.45
DEPDC1B-201ENST00000265036 FAM9AQ8IZU1 332 aaPredicted RBP12.21□□□□□ -0.45
DEPDC1B-201ENST00000265036 CEP170Q5SW79 1584 aa12.21□□□□□ -0.46
DEPDC1B-201ENST00000265036 CUL7Q14999 1698 aa12.2□□□□□ -0.46
DEPDC1B-201ENST00000265036 CLASP1Q7Z460 1538 aa12.18□□□□□ -0.46
DEPDC1B-201ENST00000265036 CARMIL1Q5VZK9 1371 aa12.17□□□□□ -0.46
DEPDC1B-201ENST00000265036 RIMBP3CA6NJZ7 1639 aa12.16□□□□□ -0.46
DEPDC1B-201ENST00000265036 RIMBP3BA6NNM3 1639 aa12.16□□□□□ -0.46
DEPDC1B-201ENST00000265036 RIMBP3Q9UFD9 1639 aa12.16□□□□□ -0.46
DEPDC1B-201ENST00000265036 ARHGEF11O15085 1522 aa12.15□□□□□ -0.46
DEPDC1B-201ENST00000265036 NUP160Q12769 1436 aa12.15□□□□□ -0.47
DEPDC1B-201ENST00000265036 EHMT2Q96KQ7 1210 aa12.14□□□□□ -0.47
DEPDC1B-201ENST00000265036 ERCC6L2Q5T890 1561 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms