RNA–Protein interactions for RNA: ENST00000262903.8

HACE1-201, Transcript of HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HACE1, Length 4,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACE1-201ENST00000262903 HIRIP3Q9BW71 556 aaPredicted RBP22.05■■□□□ 1.12
HACE1-201ENST00000262903 KDM2AQ9Y2K7 1162 aa22.01■■□□□ 1.11
HACE1-201ENST00000262903 EIF4G1Q04637 1599 aaKnown RBP22.01■■□□□ 1.11
HACE1-201ENST00000262903 VPS8Q8N3P4 1428 aa22.01■■□□□ 1.11
HACE1-201ENST00000262903 KANK4Q5T7N3 995 aaPredicted RBP22.01■■□□□ 1.11
HACE1-201ENST00000262903 FHAD1B1AJZ9 1412 aa22■■□□□ 1.11
HACE1-201ENST00000262903 RUSC2Q8N2Y8 1516 aa22■■□□□ 1.11
HACE1-201ENST00000262903 ESF1Q9H501 851 aaKnown RBP21.98■■□□□ 1.11
HACE1-201ENST00000262903 MIER1Q8N108 512 aa21.96■■□□□ 1.11
HACE1-201ENST00000262903 CCNB3Q8WWL7 1395 aa21.94■■□□□ 1.1
HACE1-201ENST00000262903 PLPPR3Q6T4P5 718 aa21.91■■□□□ 1.1
HACE1-201ENST00000262903 STAG3Q9UJ98 1225 aa21.91■■□□□ 1.1
HACE1-201ENST00000262903 RAPGEF2Q9Y4G8 1499 aa21.91■■□□□ 1.1
HACE1-201ENST00000262903 SIN3AQ96ST3 1273 aa21.88■■□□□ 1.09
HACE1-201ENST00000262903 FANCD2Q9BXW9 1451 aa21.85■■□□□ 1.09
HACE1-201ENST00000262903 NCAPD3P42695 1498 aa21.82■■□□□ 1.08
HACE1-201ENST00000262903 RGL3Q3MIN7 710 aa21.82■■□□□ 1.08
HACE1-201ENST00000262903 DAXXQ9UER7 740 aaPredicted RBP21.8■■□□□ 1.08
HACE1-201ENST00000262903 FAM9BQ8IZU0 186 aa21.8■■□□□ 1.08
HACE1-201ENST00000262903 EIF4G2P78344 907 aaKnown RBP eCLIP21.8■■□□□ 1.08
HACE1-201ENST00000262903 HNRNPUQ00839 825 aaKnown RBP eCLIP21.78■■□□□ 1.08
HACE1-201ENST00000262903 CLSPNQ9HAW4 1339 aa21.77■■□□□ 1.08
HACE1-201ENST00000262903 FHOD3Q2V2M9 1422 aa21.74■■□□□ 1.07
HACE1-201ENST00000262903 SENP3Q9H4L4 574 aaPredicted RBP21.73■■□□□ 1.07
HACE1-201ENST00000262903 FMN1Q68DA7 1419 aa21.71■■□□□ 1.07
HACE1-201ENST00000262903 SALL2Q9Y467 1007 aaPredicted RBP21.69■■□□□ 1.06
HACE1-201ENST00000262903 ARHGAP35Q9NRY4 1499 aa21.67■■□□□ 1.06
HACE1-201ENST00000262903 CARMIL2Q6F5E8 1435 aa21.67■■□□□ 1.06
HACE1-201ENST00000262903 TMC1Q8TDI8 760 aa21.67■■□□□ 1.06
HACE1-201ENST00000262903 FKBP8Q14318 412 aa21.66■■□□□ 1.06
HACE1-201ENST00000262903 MRS2Q9HD23 443 aa21.66■■□□□ 1.06
HACE1-201ENST00000262903 IGF1RP08069 1367 aa21.65■■□□□ 1.06
HACE1-201ENST00000262903 FGD5Q6ZNL6 1462 aa21.65■■□□□ 1.06
HACE1-201ENST00000262903 NEFMP07197 916 aa21.64■■□□□ 1.05
HACE1-201ENST00000262903 RAD54L2Q9Y4B4 1467 aa21.63■■□□□ 1.05
HACE1-201ENST00000262903 JPH4Q96JJ6 628 aa21.62■■□□□ 1.05
HACE1-201ENST00000262903 SETD5Q9C0A6 1442 aa21.62■■□□□ 1.05
HACE1-201ENST00000262903 CANXP27824 592 aaKnown RBP21.6■■□□□ 1.05
HACE1-201ENST00000262903 SLC24A1O60721 1099 aa21.58■■□□□ 1.05
HACE1-201ENST00000262903 CARD11Q9BXL7 1154 aa21.55■■□□□ 1.04
HACE1-201ENST00000262903 RAB3GAP2Q9H2M9 1393 aa21.55■■□□□ 1.04
HACE1-201ENST00000262903 FOXD1Q16676 465 aa21.55■■□□□ 1.04
HACE1-201ENST00000262903 CFTRP13569 1480 aa21.51■■□□□ 1.03
HACE1-201ENST00000262903 GAPVD1Q14C86 1478 aa21.5■■□□□ 1.03
HACE1-201ENST00000262903 BCL11AQ9H165 835 aa21.49■■□□□ 1.03
HACE1-201ENST00000262903 BICRAQ9NZM4 1560 aa21.48■■□□□ 1.03
HACE1-201ENST00000262903 NESP48681 1621 aa21.48■■□□□ 1.03
HACE1-201ENST00000262903 ARID4BQ4LE39 1312 aaPredicted RBP21.47■■□□□ 1.03
HACE1-201ENST00000262903 PPP1R15AO75807 674 aaPredicted RBP21.46■■□□□ 1.03
HACE1-201ENST00000262903 PKD2Q13563 968 aa21.46■■□□□ 1.03
HACE1-201ENST00000262903 DCAF11Q8TEB1 546 aa21.46■■□□□ 1.03
HACE1-201ENST00000262903 TIMELESSQ9UNS1 1208 aa21.44■■□□□ 1.02
HACE1-201ENST00000262903 SYNJ1O43426 1573 aa21.44■■□□□ 1.02
HACE1-201ENST00000262903 SENP3-EIF4A1A0A087X0R7 540 aa21.44■■□□□ 1.02
HACE1-201ENST00000262903 WDR43Q15061 677 aaKnown RBP eCLIP21.43■■□□□ 1.02
HACE1-201ENST00000262903 AQRO60306 1485 aaKnown RBP eCLIP21.42■■□□□ 1.029e-7■■■■■ 27.1
HACE1-201ENST00000262903 MPHOSPH9Q99550 1183 aa21.42■■□□□ 1.02
HACE1-201ENST00000262903 EFCAB2Q5VUJ9 269 aa21.41■■□□□ 1.02
HACE1-201ENST00000262903 HNRNPMP52272 730 aaKnown RBP eCLIP21.41■■□□□ 1.023e-7■■■■■ 27.8
HACE1-201ENST00000262903 CC2D2AQ9P2K1 1620 aa21.41■■□□□ 1.02
HACE1-201ENST00000262903 ZBTB47Q9UFB7 747 aaPredicted RBP21.38■■□□□ 1.01
HACE1-201ENST00000262903 GGT6Q6P531 493 aa21.36■■□□□ 1.01
HACE1-201ENST00000262903 HMGXB3Q12766 1538 aa21.36■■□□□ 1.01
HACE1-201ENST00000262903 DNAJC5BQ9UF47 199 aa21.36■■□□□ 1.01
HACE1-201ENST00000262903 NUP155O75694 1391 aa21.35■■□□□ 1.01
HACE1-201ENST00000262903 IRX6P78412 446 aaPredicted RBP21.35■■□□□ 1.01
HACE1-201ENST00000262903 RTL5Q5HYW3 569 aaPredicted RBP21.34■■□□□ 1.01
HACE1-201ENST00000262903 CCDC18Q5T9S5 1454 aa21.33■■□□□ 1.01
HACE1-201ENST00000262903 ANKRD30AQ9BXX3 1397 aa21.32■■□□□ 1
HACE1-201ENST00000262903 MLECQ14165 292 aa21.32■■□□□ 1
HACE1-201ENST00000262903 PTPRGP23470 1445 aa21.3■■□□□ 1
HACE1-201ENST00000262903 KNSTRNQ9Y448 316 aa21.3■■□□□ 1
HACE1-201ENST00000262903 CDCA8Q53HL2 280 aa21.3■■□□□ 1
HACE1-201ENST00000262903 HSPA5P11021 654 aaKnown RBP21.29■■□□□ 1
HACE1-201ENST00000262903 KIF21BO75037 1637 aa21.28■■□□□ 1
HACE1-201ENST00000262903 KANK1Q14678 1352 aa21.28■■□□□ 1
HACE1-201ENST00000262903 CUX1P39880 1505 aa21.27■■□□□ 1
HACE1-201ENST00000262903 DHX57Q6P158 1386 aaKnown RBP21.24■□□□□ 0.99
HACE1-201ENST00000262903 L3MBTL2Q969R5 705 aa21.24■□□□□ 0.99
HACE1-201ENST00000262903 TRHP20396 242 aaPredicted RBP21.24■□□□□ 0.99
HACE1-201ENST00000262903 CCDC136Q96JN2 1154 aa21.23■□□□□ 0.99
HACE1-201ENST00000262903 KIF3BO15066 747 aa21.22■□□□□ 0.99
HACE1-201ENST00000262903 PLEKHG5O94827 1062 aa21.22■□□□□ 0.99
HACE1-201ENST00000262903 TOPBP1Q92547 1522 aa21.21■□□□□ 0.99
HACE1-201ENST00000262903 ARAP1Q96P48 1450 aa21.21■□□□□ 0.99
HACE1-201ENST00000262903 TOP2BQ02880 1626 aa21.21■□□□□ 0.99
HACE1-201ENST00000262903 POGKQ9P215 609 aa21.2■□□□□ 0.98
HACE1-201ENST00000262903 PRXQ9BXM0 1461 aa21.2■□□□□ 0.98
HACE1-201ENST00000262903 POLA1P09884 1462 aaPredicted RBP21.2■□□□□ 0.98
HACE1-201ENST00000262903 RSPH4AQ5TD94 716 aa21.19■□□□□ 0.98
HACE1-201ENST00000262903 SPAG9O60271 1321 aaKnown RBP21.19■□□□□ 0.98
HACE1-201ENST00000262903 CC2D1BQ5T0F9 858 aaKnown RBP21.18■□□□□ 0.98
HACE1-201ENST00000262903 NPM2Q86SE8 214 aaKnown RBP21.17■□□□□ 0.98
HACE1-201ENST00000262903 PHLDB1Q86UU1 1377 aa21.16■□□□□ 0.98
HACE1-201ENST00000262903 TMF1P82094 1093 aa21.16■□□□□ 0.98
HACE1-201ENST00000262903 GRIN2BQ13224 1484 aa21.16■□□□□ 0.98
HACE1-201ENST00000262903 ZNF644Q9H582 1327 aaPredicted RBP21.16■□□□□ 0.98
HACE1-201ENST00000262903 C14orf37Q86TY3 774 aa21.15■□□□□ 0.98
HACE1-201ENST00000262903 SUPT16HQ9Y5B9 1047 aaKnown RBP21.15■□□□□ 0.98
HACE1-201ENST00000262903 ERICH3Q5RHP9 1530 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms