RNA–Protein interactions for RNA: ENST00000262903.8

HACE1-201, Transcript of HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HACE1, Length 4,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACE1-201ENST00000262903 NISCHQ9Y2I1 1504 aa29.44■■■□□ 2.3
HACE1-201ENST00000262903 DCAF8L2P0C7V8 631 aa28.74■■■□□ 2.19
HACE1-201ENST00000262903 SUPT5HO00267 1087 aaKnown RBP27.3■■□□□ 1.96
HACE1-201ENST00000262903 SHROOM4Q9ULL8 1493 aa27.29■■□□□ 1.96
HACE1-201ENST00000262903 EHMT2Q96KQ7 1210 aa26■■□□□ 1.75
HACE1-201ENST00000262903 FAM9AQ8IZU1 332 aaPredicted RBP25.61■■□□□ 1.69
HACE1-201ENST00000262903 TRIM41Q8WV44 630 aa25.29■■□□□ 1.64
HACE1-201ENST00000262903 ABCC9O60706 1549 aa25.15■■□□□ 1.62
HACE1-201ENST00000262903 APLP2Q06481 763 aa25.04■■□□□ 1.6
HACE1-201ENST00000262903 TTBK1Q5TCY1 1321 aaPredicted RBP25.01■■□□□ 1.59
HACE1-201ENST00000262903 PCGF6Q9BYE7 350 aa24.96■■□□□ 1.59
HACE1-201ENST00000262903 RANGAP1P46060 587 aaPredicted RBP24.95■■□□□ 1.58
HACE1-201ENST00000262903 UBTFP17480 764 aaKnown RBP24.77■■□□□ 1.56
HACE1-201ENST00000262903 CHIC1Q5VXU3 224 aa24.76■■□□□ 1.55
HACE1-201ENST00000262903 PABPN1Q86U42 306 aaKnown RBP eCLIP24.75■■□□□ 1.55
HACE1-201ENST00000262903 LOC105371045A0A1W2PR82 267 aa24.55■■□□□ 1.52
HACE1-201ENST00000262903 ATP1B4Q9UN42 357 aaPredicted RBP24.51■■□□□ 1.51
HACE1-201ENST00000262903 PPARGC1BQ86YN6 1023 aaKnown RBP24.46■■□□□ 1.51
HACE1-201ENST00000262903 ZCCHC6Q5VYS8 1495 aaKnown RBP24.44■■□□□ 1.5
HACE1-201ENST00000262903 CCDC180Q9P1Z9 1646 aa24.31■■□□□ 1.48
HACE1-201ENST00000262903 CCER1Q8TC90 406 aaPredicted RBP24.27■■□□□ 1.48
HACE1-201ENST00000262903 SCRIBQ14160 1630 aa24.12■■□□□ 1.45
HACE1-201ENST00000262903 HRCP23327 699 aa24.1■■□□□ 1.45
HACE1-201ENST00000262903 TRIM26Q12899 539 aaPredicted RBP24.09■■□□□ 1.45
HACE1-201ENST00000262903 ZEB1P37275 1124 aaPredicted RBP24.08■■□□□ 1.45
HACE1-201ENST00000262903 ITGAEP38570 1179 aa23.83■■□□□ 1.41
HACE1-201ENST00000262903 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.76■■□□□ 1.39
HACE1-201ENST00000262903 HNRNPUL2Q1KMD3 747 aaKnown RBP23.76■■□□□ 1.39
HACE1-201ENST00000262903 RB1CC1Q8TDY2 1594 aa23.58■■□□□ 1.37
HACE1-201ENST00000262903 CSRNP3Q8WYN3 585 aa23.56■■□□□ 1.36
HACE1-201ENST00000262903 CENPBP07199 599 aaPredicted RBP23.53■■□□□ 1.36
HACE1-201ENST00000262903 NACADO15069 1562 aa23.49■■□□□ 1.35
HACE1-201ENST00000262903 RSF1Q96T23 1441 aaPredicted RBP23.48■■□□□ 1.35
HACE1-201ENST00000262903 PELP1Q8IZL8 1130 aaKnown RBP23.42■■□□□ 1.34
HACE1-201ENST00000262903 DCAF1Q9Y4B6 1507 aa23.37■■□□□ 1.33
HACE1-201ENST00000262903 YTHDC1Q96MU7 727 aaKnown RBP23.35■■□□□ 1.33
HACE1-201ENST00000262903 FBLN2P98095 1184 aa23.34■■□□□ 1.33
HACE1-201ENST00000262903 FAM50AQ14320 339 aaKnown RBP23.33■■□□□ 1.32
HACE1-201ENST00000262903 MYT1LQ9UL68 1186 aa23.33■■□□□ 1.32
HACE1-201ENST00000262903 P3H3Q8IVL6 736 aa23.3■■□□□ 1.32
HACE1-201ENST00000262903 CECR2Q9BXF3 1484 aa23.22■■□□□ 1.31
HACE1-201ENST00000262903 ARID3CA6NKF2 412 aa23.11■■□□□ 1.29
HACE1-201ENST00000262903 MYO15BQ96JP2 1530 aa23.07■■□□□ 1.28
HACE1-201ENST00000262903 POLR3GLQ9BT43 218 aa23.06■■□□□ 1.28
HACE1-201ENST00000262903 TRIM52Q96A61 297 aa23.01■■□□□ 1.27
HACE1-201ENST00000262903 BAZ1BQ9UIG0 1483 aaKnown RBP23■■□□□ 1.27
HACE1-201ENST00000262903 BAZ1AQ9NRL2 1556 aaPredicted RBP22.99■■□□□ 1.27
HACE1-201ENST00000262903 NEUROD1Q13562 356 aa22.97■■□□□ 1.27
HACE1-201ENST00000262903 DIEXFQ68CQ4 756 aaKnown RBP22.95■■□□□ 1.26
HACE1-201ENST00000262903 CNGB1Q14028 1251 aaPredicted RBP22.92■■□□□ 1.26
HACE1-201ENST00000262903 MROH2BQ7Z745 1585 aa22.88■■□□□ 1.25
HACE1-201ENST00000262903 WRNQ14191 1432 aaPredicted RBP eCLIP22.87■■□□□ 1.25
HACE1-201ENST00000262903 NEFLP07196 543 aa22.85■■□□□ 1.25
HACE1-201ENST00000262903 ZNF777Q9ULD5 760 aaPredicted RBP22.74■■□□□ 1.23
HACE1-201ENST00000262903 CLIP1P30622 1438 aa22.72■■□□□ 1.23
HACE1-201ENST00000262903 CDK11AQ9UQ88 783 aaPredicted RBP22.7■■□□□ 1.22
HACE1-201ENST00000262903 EEA1Q15075 1411 aa22.7■■□□□ 1.22
HACE1-201ENST00000262903 ZNF326Q5BKZ1 582 aaKnown RBP22.66■■□□□ 1.22
HACE1-201ENST00000262903 CEP162Q5TB80 1403 aa22.63■■□□□ 1.21
HACE1-201ENST00000262903 CCDC88BA6NC98 1476 aa22.63■■□□□ 1.21
HACE1-201ENST00000262903 GOLGA3Q08378 1498 aa22.62■■□□□ 1.21
HACE1-201ENST00000262903 CHMP7Q8WUX9 453 aaPredicted RBP22.61■■□□□ 1.21
HACE1-201ENST00000262903 ZNF316A6NFI3 1004 aaPredicted RBP22.58■■□□□ 1.21
HACE1-201ENST00000262903 KIF27Q86VH2 1401 aa22.57■■□□□ 1.2
HACE1-201ENST00000262903 GTF3C3Q9Y5Q9 886 aa22.55■■□□□ 1.2
HACE1-201ENST00000262903 SOGA1O94964 1423 aa22.54■■□□□ 1.2
HACE1-201ENST00000262903 WIZO95785 1651 aa22.52■■□□□ 1.2
HACE1-201ENST00000262903 TNIKQ9UKE5 1360 aa22.52■■□□□ 1.2
HACE1-201ENST00000262903 SLC4A1APQ9BWU0 796 aaKnown RBP22.52■■□□□ 1.19
HACE1-201ENST00000262903 CHIC2Q9UKJ5 165 aa22.5■■□□□ 1.19
HACE1-201ENST00000262903 MTUS2Q5JR59 1369 aa22.47■■□□□ 1.19
HACE1-201ENST00000262903 CEP164Q9UPV0 1460 aa22.47■■□□□ 1.19
HACE1-201ENST00000262903 ABCC8Q09428 1581 aa22.46■■□□□ 1.19
HACE1-201ENST00000262903 ERICH6Q7L0X2 663 aa22.44■■□□□ 1.18
HACE1-201ENST00000262903 SMARCA2P51531 1590 aa22.43■■□□□ 1.18
HACE1-201ENST00000262903 ACIN1Q9UKV3 1341 aaKnown RBP22.39■■□□□ 1.17
HACE1-201ENST00000262903 TOP2AP11388 1531 aaKnown RBP22.36■■□□□ 1.17
HACE1-201ENST00000262903 ANP32CO43423 234 aa22.35■■□□□ 1.17
HACE1-201ENST00000262903 CUX2O14529 1486 aa22.34■■□□□ 1.17
HACE1-201ENST00000262903 ATAD2BQ9ULI0 1458 aa22.32■■□□□ 1.16
HACE1-201ENST00000262903 NPM1P06748 294 aaKnown RBP eCLIP22.32■■□□□ 1.16
HACE1-201ENST00000262903 ERCC6Q03468 1493 aa22.29■■□□□ 1.16
HACE1-201ENST00000262903 CARMIL1Q5VZK9 1371 aa22.29■■□□□ 1.16
HACE1-201ENST00000262903 TONSLQ96HA7 1378 aa22.29■■□□□ 1.16
HACE1-201ENST00000262903 SMARCA4P51532 1647 aa22.26■■□□□ 1.15
HACE1-201ENST00000262903 TSPY4P0CV99 314 aa22.23■■□□□ 1.15
HACE1-201ENST00000262903 TSPY10P0CW01 314 aa22.23■■□□□ 1.15
HACE1-201ENST00000262903 RRP7BPQ9NSQ0 103 aa22.23■■□□□ 1.15
HACE1-201ENST00000262903 MYT1Q01538 1121 aa22.21■■□□□ 1.15
HACE1-201ENST00000262903 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.2■■□□□ 1.14
HACE1-201ENST00000262903 KCNH8Q96L42 1107 aa22.18■■□□□ 1.14
HACE1-201ENST00000262903 PLEKHD1A6NEE1 506 aa22.18■■□□□ 1.14
HACE1-201ENST00000262903 CADPSQ9ULU8 1353 aa22.18■■□□□ 1.14
HACE1-201ENST00000262903 TDRD9Q8NDG6 1382 aaKnown RBP22.15■■□□□ 1.14
HACE1-201ENST00000262903 DDX10Q13206 875 aaKnown RBP22.12■■□□□ 1.13
HACE1-201ENST00000262903 PDS5BQ9NTI5 1447 aa22.12■■□□□ 1.13
HACE1-201ENST00000262903 SCAF1Q9H7N4 1312 aaKnown RBP22.11■■□□□ 1.13
HACE1-201ENST00000262903 BCANQ96GW7 911 aa22.11■■□□□ 1.13
HACE1-201ENST00000262903 CHGAP10645 457 aaKnown RBP22.1■■□□□ 1.13
HACE1-201ENST00000262903 CFDP1Q9UEE9 299 aaPredicted RBP22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms