RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 DNAJC5BQ9UF47 199 aa21.11■□□□□ 0.97
XRCC1-201ENST00000262887 ARHGAP35Q9NRY4 1499 aa21.11■□□□□ 0.97
XRCC1-201ENST00000262887 SETD5Q9C0A6 1442 aa21.09■□□□□ 0.97
XRCC1-201ENST00000262887 MSH5O43196 834 aa21.09■□□□□ 0.97
XRCC1-201ENST00000262887 CCER2I3L3R5 266 aa21.09■□□□□ 0.97
XRCC1-201ENST00000262887 SIN3AQ96ST3 1273 aa21.07■□□□□ 0.96
XRCC1-201ENST00000262887 ANP32CO43423 234 aa21.06■□□□□ 0.96
XRCC1-201ENST00000262887 KIF27Q86VH2 1401 aa21.06■□□□□ 0.96
XRCC1-201ENST00000262887 FANCIQ9NVI1 1328 aa21.02■□□□□ 0.95
XRCC1-201ENST00000262887 HIRIP3Q9BW71 556 aaPredicted RBP21.01■□□□□ 0.95
XRCC1-201ENST00000262887 TIMELESSQ9UNS1 1208 aa21■□□□□ 0.95
XRCC1-201ENST00000262887 TIAM1Q13009 1591 aa20.99■□□□□ 0.95
XRCC1-201ENST00000262887 CUX1P39880 1505 aa20.96■□□□□ 0.95
XRCC1-201ENST00000262887 MAP3K1Q13233 1512 aa20.95■□□□□ 0.94
XRCC1-201ENST00000262887 FAM50AQ14320 339 aaKnown RBP20.95■□□□□ 0.94
XRCC1-201ENST00000262887 CDK11AQ9UQ88 783 aaPredicted RBP20.93■□□□□ 0.94
XRCC1-201ENST00000262887 PHLDB1Q86UU1 1377 aa20.93■□□□□ 0.94
XRCC1-201ENST00000262887 LRRC9Q6ZRR7 1453 aa20.92■□□□□ 0.94
XRCC1-201ENST00000262887 MYT1LQ9UL68 1186 aa20.85■□□□□ 0.93
XRCC1-201ENST00000262887 CC2D2AQ9P2K1 1620 aa20.84■□□□□ 0.93
XRCC1-201ENST00000262887 HNRNPUQ00839 825 aaKnown RBP eCLIP20.82■□□□□ 0.92
XRCC1-201ENST00000262887 IRX6P78412 446 aaPredicted RBP20.81■□□□□ 0.92
XRCC1-201ENST00000262887 TONSLQ96HA7 1378 aa20.81■□□□□ 0.92
XRCC1-201ENST00000262887 FHAD1B1AJZ9 1412 aa20.77■□□□□ 0.92
XRCC1-201ENST00000262887 CFAP43Q8NDM7 1665 aa20.76■□□□□ 0.91
XRCC1-201ENST00000262887 ERICH6BQ5W0A0 696 aa20.75■□□□□ 0.91
XRCC1-201ENST00000262887 IGF1RP08069 1367 aa20.75■□□□□ 0.91
XRCC1-201ENST00000262887 ATP1B4Q9UN42 357 aaPredicted RBP20.73■□□□□ 0.91
XRCC1-201ENST00000262887 PCF11O94913 1555 aaKnown RBP20.72■□□□□ 0.91
XRCC1-201ENST00000262887 DEKP35659 375 aaKnown RBP20.71■□□□□ 0.91
XRCC1-201ENST00000262887 ANO8Q9HCE9 1232 aaPredicted RBP20.71■□□□□ 0.91
XRCC1-201ENST00000262887 PPP4R2Q9NY27 417 aa20.71■□□□□ 0.91
XRCC1-201ENST00000262887 CARMIL1Q5VZK9 1371 aa20.7■□□□□ 0.9
XRCC1-201ENST00000262887 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.68■□□□□ 0.9
XRCC1-201ENST00000262887 CFTRP13569 1480 aa20.68■□□□□ 0.9
XRCC1-201ENST00000262887 HMGXB3Q12766 1538 aa20.67■□□□□ 0.9
XRCC1-201ENST00000262887 P3H3Q8IVL6 736 aa20.67■□□□□ 0.9
XRCC1-201ENST00000262887 NCAPD3P42695 1498 aa20.67■□□□□ 0.9
XRCC1-201ENST00000262887 CCDC18Q5T9S5 1454 aa20.65■□□□□ 0.9
XRCC1-201ENST00000262887 UACAQ9BZF9 1416 aa20.62■□□□□ 0.89
XRCC1-201ENST00000262887 NESP48681 1621 aa20.62■□□□□ 0.89
XRCC1-201ENST00000262887 FYCO1Q9BQS8 1478 aa20.6■□□□□ 0.89
XRCC1-201ENST00000262887 FGD6Q6ZV73 1430 aa20.58■□□□□ 0.89
XRCC1-201ENST00000262887 FHOD3Q2V2M9 1422 aa20.58■□□□□ 0.88
XRCC1-201ENST00000262887 HFM1A2PYH4 1435 aa20.57■□□□□ 0.88
XRCC1-201ENST00000262887 WASHC2AQ641Q2 1341 aa20.57■□□□□ 0.88
XRCC1-201ENST00000262887 NOP58Q9Y2X3 529 aaKnown RBP20.56■□□□□ 0.88
XRCC1-201ENST00000262887 B4GALNT3Q6L9W6 998 aa20.54■□□□□ 0.88
XRCC1-201ENST00000262887 PTPN23Q9H3S7 1636 aa20.54■□□□□ 0.88
XRCC1-201ENST00000262887 CASKIN1Q8WXD9 1431 aa20.54■□□□□ 0.88
XRCC1-201ENST00000262887 FGD5Q6ZNL6 1462 aa20.54■□□□□ 0.88
XRCC1-201ENST00000262887 KDM5BQ9UGL1 1544 aa20.53■□□□□ 0.88
XRCC1-201ENST00000262887 HSPA5P11021 654 aaKnown RBP20.53■□□□□ 0.88
XRCC1-201ENST00000262887 PTPRKQ15262 1439 aa20.51■□□□□ 0.87
XRCC1-201ENST00000262887 CCDC184Q52MB2 194 aa20.5■□□□□ 0.87
XRCC1-201ENST00000262887 AQRO60306 1485 aaKnown RBP eCLIP20.5■□□□□ 0.876e-6■■■■□ 25.1
XRCC1-201ENST00000262887 NBR1Q14596 966 aa20.49■□□□□ 0.87
XRCC1-201ENST00000262887 CNTLNQ9NXG0 1405 aa20.49■□□□□ 0.87
XRCC1-201ENST00000262887 EFCAB5A4FU69 1503 aa20.48■□□□□ 0.87
XRCC1-201ENST00000262887 NAIPQ13075 1403 aa20.48■□□□□ 0.87
XRCC1-201ENST00000262887 PRDM2Q13029 1718 aa20.48■□□□□ 0.87
XRCC1-201ENST00000262887 FAM9BQ8IZU0 186 aa20.48■□□□□ 0.87
XRCC1-201ENST00000262887 NCOA2Q15596 1464 aa20.47■□□□□ 0.87
XRCC1-201ENST00000262887 EIF4G2P78344 907 aaKnown RBP eCLIP20.46■□□□□ 0.87
XRCC1-201ENST00000262887 MTUS2Q5JR59 1369 aa20.46■□□□□ 0.87
XRCC1-201ENST00000262887 ZBED9Q6R2W3 1325 aa20.46■□□□□ 0.87
XRCC1-201ENST00000262887 PAK3O75914 559 aaPredicted RBP20.46■□□□□ 0.87
XRCC1-201ENST00000262887 SALL2Q9Y467 1007 aaPredicted RBP20.45■□□□□ 0.86
XRCC1-201ENST00000262887 FMN1Q68DA7 1419 aa20.44■□□□□ 0.86
XRCC1-201ENST00000262887 MRS2Q9HD23 443 aa20.44■□□□□ 0.86
XRCC1-201ENST00000262887 PRKRIP1Q9H875 184 aaPredicted RBP20.43■□□□□ 0.86
XRCC1-201ENST00000262887 MYOM3Q5VTT5 1437 aa20.38■□□□□ 0.85
XRCC1-201ENST00000262887 SNAPC4Q5SXM2 1469 aa20.36■□□□□ 0.85
XRCC1-201ENST00000262887 CCDC7Q96M83 1385 aa20.36■□□□□ 0.85
XRCC1-201ENST00000262887 ANP32AP39687 249 aaKnown RBP20.35■□□□□ 0.85
XRCC1-201ENST00000262887 UBE2Q2Q8WVN8 375 aa20.35■□□□□ 0.85
XRCC1-201ENST00000262887 IPO9Q96P70 1041 aaKnown RBP20.35■□□□□ 0.85
XRCC1-201ENST00000262887 NCOA1Q15788 1441 aa20.35■□□□□ 0.85
XRCC1-201ENST00000262887 CADPSQ9ULU8 1353 aa20.35■□□□□ 0.85
XRCC1-201ENST00000262887 RTL5Q5HYW3 569 aaPredicted RBP20.35■□□□□ 0.85
XRCC1-201ENST00000262887 C11orf95C9JLR9 678 aaPredicted RBP20.34■□□□□ 0.85
XRCC1-201ENST00000262887 RRP7BPQ9NSQ0 103 aa20.32■□□□□ 0.84
XRCC1-201ENST00000262887 CTTNBP2Q8WZ74 1663 aa20.31■□□□□ 0.84
XRCC1-201ENST00000262887 HECW1Q76N89 1606 aa20.31■□□□□ 0.84
XRCC1-201ENST00000262887 ZBTB47Q9UFB7 747 aaPredicted RBP20.3■□□□□ 0.84
XRCC1-201ENST00000262887 DENND4BO75064 1496 aaPredicted RBP20.3■□□□□ 0.84
XRCC1-201ENST00000262887 L3MBTL2Q969R5 705 aa20.29■□□□□ 0.84
XRCC1-201ENST00000262887 CCDC136Q96JN2 1154 aa20.29■□□□□ 0.84
XRCC1-201ENST00000262887 SUPT6HQ7KZ85 1726 aaKnown RBP20.28■□□□□ 0.84
XRCC1-201ENST00000262887 CHIC2Q9UKJ5 165 aa20.28■□□□□ 0.84
XRCC1-201ENST00000262887 AKNAQ7Z591 1439 aa20.28■□□□□ 0.84
XRCC1-201ENST00000262887 SMG6Q86US8 1419 aaKnown RBP20.27■□□□□ 0.84
XRCC1-201ENST00000262887 GCC2Q8IWJ2 1684 aa20.25■□□□□ 0.83
XRCC1-201ENST00000262887 EHBP1L1Q8N3D4 1523 aa20.25■□□□□ 0.83
XRCC1-201ENST00000262887 LRRIQ1Q96JM4 1722 aa20.25■□□□□ 0.83
XRCC1-201ENST00000262887 CUL7Q14999 1698 aa20.25■□□□□ 0.83
XRCC1-201ENST00000262887 RAD54L2Q9Y4B4 1467 aa20.24■□□□□ 0.83
XRCC1-201ENST00000262887 ABCA10Q8WWZ4 1543 aa20.23■□□□□ 0.83
XRCC1-201ENST00000262887 MPHOSPH9Q99550 1183 aa20.23■□□□□ 0.83
XRCC1-201ENST00000262887 FANCD2Q9BXW9 1451 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms