RNA–Protein interactions for RNA: ENST00000262844.9

AMMECR1-201, Transcript of Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene AMMECR1, Length 5,504 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMMECR1-201ENST00000262844 HIRIP3Q9BW71 556 aaPredicted RBP23.53■■□□□ 1.36
AMMECR1-201ENST00000262844 PLEKHD1A6NEE1 506 aa23.53■■□□□ 1.36
AMMECR1-201ENST00000262844 SCAF1Q9H7N4 1312 aaKnown RBP23.53■■□□□ 1.36
AMMECR1-201ENST00000262844 PDS5BQ9NTI5 1447 aa23.51■■□□□ 1.35
AMMECR1-201ENST00000262844 HNRNPUQ00839 825 aaKnown RBP eCLIP23.46■■□□□ 1.35
AMMECR1-201ENST00000262844 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.46■■□□□ 1.35
AMMECR1-201ENST00000262844 CFDP1Q9UEE9 299 aaPredicted RBP23.46■■□□□ 1.35
AMMECR1-201ENST00000262844 SIN3AQ96ST3 1273 aa23.45■■□□□ 1.35
AMMECR1-201ENST00000262844 EIF4G2P78344 907 aaKnown RBP eCLIP23.45■■□□□ 1.34
AMMECR1-201ENST00000262844 ERCC6Q03468 1493 aa23.45■■□□□ 1.34
AMMECR1-201ENST00000262844 TDRD9Q8NDG6 1382 aaKnown RBP23.44■■□□□ 1.34
AMMECR1-201ENST00000262844 EIF4G1Q04637 1599 aaKnown RBP23.42■■□□□ 1.34
AMMECR1-201ENST00000262844 NPM1P06748 294 aaKnown RBP eCLIP23.42■■□□□ 1.34
AMMECR1-201ENST00000262844 FKBP8Q14318 412 aa23.42■■□□□ 1.34
AMMECR1-201ENST00000262844 FAM9BQ8IZU0 186 aa23.39■■□□□ 1.33
AMMECR1-201ENST00000262844 NCAPD3P42695 1498 aa23.37■■□□□ 1.33
AMMECR1-201ENST00000262844 KDM2AQ9Y2K7 1162 aa23.37■■□□□ 1.33
AMMECR1-201ENST00000262844 SETD5Q9C0A6 1442 aa23.37■■□□□ 1.33
AMMECR1-201ENST00000262844 ARHGAP35Q9NRY4 1499 aa23.36■■□□□ 1.33
AMMECR1-201ENST00000262844 ZBTB47Q9UFB7 747 aaPredicted RBP23.35■■□□□ 1.33
AMMECR1-201ENST00000262844 FMN1Q68DA7 1419 aa23.34■■□□□ 1.33
AMMECR1-201ENST00000262844 TIMELESSQ9UNS1 1208 aa23.33■■□□□ 1.33
AMMECR1-201ENST00000262844 KCNH8Q96L42 1107 aa23.31■■□□□ 1.32
AMMECR1-201ENST00000262844 FANCD2Q9BXW9 1451 aa23.3■■□□□ 1.32
AMMECR1-201ENST00000262844 MRS2Q9HD23 443 aa23.29■■□□□ 1.32
AMMECR1-201ENST00000262844 CANXP27824 592 aaKnown RBP23.28■■□□□ 1.32
AMMECR1-201ENST00000262844 CHGAP10645 457 aaKnown RBP23.27■■□□□ 1.32
AMMECR1-201ENST00000262844 RAB3GAP2Q9H2M9 1393 aa23.26■■□□□ 1.31
AMMECR1-201ENST00000262844 TMC1Q8TDI8 760 aa23.25■■□□□ 1.31
AMMECR1-201ENST00000262844 FHOD3Q2V2M9 1422 aa23.24■■□□□ 1.31
AMMECR1-201ENST00000262844 NEFMP07197 916 aa23.23■■□□□ 1.31
AMMECR1-201ENST00000262844 IGF1RP08069 1367 aa23.21■■□□□ 1.31
AMMECR1-201ENST00000262844 FGD5Q6ZNL6 1462 aa23.16■■□□□ 1.3
AMMECR1-201ENST00000262844 SLC24A1O60721 1099 aa23.15■■□□□ 1.3
AMMECR1-201ENST00000262844 SYNJ1O43426 1573 aa23.14■■□□□ 1.29
AMMECR1-201ENST00000262844 RGL3Q3MIN7 710 aa23.12■■□□□ 1.29
AMMECR1-201ENST00000262844 CFTRP13569 1480 aa23.09■■□□□ 1.29
AMMECR1-201ENST00000262844 BCL11AQ9H165 835 aa23.09■■□□□ 1.29
AMMECR1-201ENST00000262844 KIF21BO75037 1637 aa23.09■■□□□ 1.29
AMMECR1-201ENST00000262844 CARMIL2Q6F5E8 1435 aa23.09■■□□□ 1.29
AMMECR1-201ENST00000262844 SALL2Q9Y467 1007 aaPredicted RBP23.08■■□□□ 1.29
AMMECR1-201ENST00000262844 STAG3Q9UJ98 1225 aa23.07■■□□□ 1.28
AMMECR1-201ENST00000262844 CARD11Q9BXL7 1154 aa23.06■■□□□ 1.28
AMMECR1-201ENST00000262844 DHX57Q6P158 1386 aaKnown RBP23.06■■□□□ 1.28
AMMECR1-201ENST00000262844 ESF1Q9H501 851 aaKnown RBP23.06■■□□□ 1.28
AMMECR1-201ENST00000262844 BICRAQ9NZM4 1560 aa23.03■■□□□ 1.28
AMMECR1-201ENST00000262844 RAD54L2Q9Y4B4 1467 aa23.02■■□□□ 1.28
AMMECR1-201ENST00000262844 ANP32AP39687 249 aaKnown RBP23.02■■□□□ 1.28
AMMECR1-201ENST00000262844 HMGXB3Q12766 1538 aa23.01■■□□□ 1.27
AMMECR1-201ENST00000262844 PPP1R15AO75807 674 aaPredicted RBP23■■□□□ 1.27
AMMECR1-201ENST00000262844 ERICH3Q5RHP9 1530 aa22.99■■□□□ 1.27
AMMECR1-201ENST00000262844 MPHOSPH9Q99550 1183 aa22.98■■□□□ 1.27
AMMECR1-201ENST00000262844 WDR43Q15061 677 aaKnown RBP eCLIP22.97■■□□□ 1.27
AMMECR1-201ENST00000262844 TOP2BQ02880 1626 aa22.96■■□□□ 1.27
AMMECR1-201ENST00000262844 IRX6P78412 446 aaPredicted RBP22.95■■□□□ 1.27
AMMECR1-201ENST00000262844 GAPVD1Q14C86 1478 aa22.95■■□□□ 1.27
AMMECR1-201ENST00000262844 FOXD1Q16676 465 aa22.95■■□□□ 1.26
AMMECR1-201ENST00000262844 CCDC136Q96JN2 1154 aa22.94■■□□□ 1.26
AMMECR1-201ENST00000262844 HSPA5P11021 654 aaKnown RBP22.92■■□□□ 1.26
AMMECR1-201ENST00000262844 CCER2I3L3R5 266 aa22.92■■□□□ 1.26
AMMECR1-201ENST00000262844 PRXQ9BXM0 1461 aa22.92■■□□□ 1.26
AMMECR1-201ENST00000262844 PKD2Q13563 968 aa22.92■■□□□ 1.26
AMMECR1-201ENST00000262844 CCDC18Q5T9S5 1454 aa22.91■■□□□ 1.26
AMMECR1-201ENST00000262844 JPH4Q96JJ6 628 aa22.9■■□□□ 1.26
AMMECR1-201ENST00000262844 NPM2Q86SE8 214 aaKnown RBP22.89■■□□□ 1.25
AMMECR1-201ENST00000262844 DCAF11Q8TEB1 546 aa22.89■■□□□ 1.25
AMMECR1-201ENST00000262844 CUX1P39880 1505 aa22.88■■□□□ 1.25
AMMECR1-201ENST00000262844 ARAP1Q96P48 1450 aa22.87■■□□□ 1.25
AMMECR1-201ENST00000262844 CDCA8Q53HL2 280 aa22.87■■□□□ 1.25
AMMECR1-201ENST00000262844 ANKRD30AQ9BXX3 1397 aa22.85■■□□□ 1.25
AMMECR1-201ENST00000262844 SUPT16HQ9Y5B9 1047 aaKnown RBP22.85■■□□□ 1.25
AMMECR1-201ENST00000262844 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.82■■□□□ 1.24
AMMECR1-201ENST00000262844 KNSTRNQ9Y448 316 aa22.8■■□□□ 1.24
AMMECR1-201ENST00000262844 LRRC9Q6ZRR7 1453 aa22.8■■□□□ 1.24
AMMECR1-201ENST00000262844 NUP155O75694 1391 aa22.8■■□□□ 1.24
AMMECR1-201ENST00000262844 PEG3Q9GZU2 1588 aa22.8■■□□□ 1.24
AMMECR1-201ENST00000262844 L3MBTL2Q969R5 705 aa22.79■■□□□ 1.24
AMMECR1-201ENST00000262844 PHLDB1Q86UU1 1377 aa22.79■■□□□ 1.24
AMMECR1-201ENST00000262844 CC2D2AQ9P2K1 1620 aa22.77■■□□□ 1.24
AMMECR1-201ENST00000262844 NESP48681 1621 aa22.75■■□□□ 1.23
AMMECR1-201ENST00000262844 CASKIN1Q8WXD9 1431 aa22.75■■□□□ 1.23
AMMECR1-201ENST00000262844 SENP3-EIF4A1A0A087X0R7 540 aa22.73■■□□□ 1.23
AMMECR1-201ENST00000262844 FGD6Q6ZV73 1430 aa22.73■■□□□ 1.23
AMMECR1-201ENST00000262844 EFCAB2Q5VUJ9 269 aa22.73■■□□□ 1.23
AMMECR1-201ENST00000262844 HNRNPMP52272 730 aaKnown RBP eCLIP22.72■■□□□ 1.23
AMMECR1-201ENST00000262844 AQRO60306 1485 aaKnown RBP eCLIP22.71■■□□□ 1.23
AMMECR1-201ENST00000262844 RSPH4AQ5TD94 716 aa22.71■■□□□ 1.23
AMMECR1-201ENST00000262844 RRBP1Q9P2E9 1410 aaKnown RBP22.71■■□□□ 1.23
AMMECR1-201ENST00000262844 UNC13AQ9UPW8 1703 aa22.7■■□□□ 1.22
AMMECR1-201ENST00000262844 KANK1Q14678 1352 aa22.7■■□□□ 1.22
AMMECR1-201ENST00000262844 UPF2Q9HAU5 1272 aaKnown RBP22.7■■□□□ 1.22
AMMECR1-201ENST00000262844 TOPBP1Q92547 1522 aa22.7■■□□□ 1.22
AMMECR1-201ENST00000262844 TMF1P82094 1093 aa22.69■■□□□ 1.22
AMMECR1-201ENST00000262844 MYOM3Q5VTT5 1437 aa22.68■■□□□ 1.22
AMMECR1-201ENST00000262844 PLPPR3Q6T4P5 718 aa22.68■■□□□ 1.22
AMMECR1-201ENST00000262844 HSP90AA1P07900 732 aaKnown RBP22.67■■□□□ 1.22
AMMECR1-201ENST00000262844 POLA1P09884 1462 aaPredicted RBP22.67■■□□□ 1.22
AMMECR1-201ENST00000262844 SENP3Q9H4L4 574 aaPredicted RBP22.67■■□□□ 1.22
AMMECR1-201ENST00000262844 FYCO1Q9BQS8 1478 aa22.64■■□□□ 1.21
AMMECR1-201ENST00000262844 CC2D1BQ5T0F9 858 aaKnown RBP22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms