RNA–Protein interactions for RNA: ENST00000262844.9

AMMECR1-201, Transcript of Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene AMMECR1, Length 5,504 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMMECR1-201ENST00000262844 NISCHQ9Y2I1 1504 aa31.72■■■□□ 2.67
AMMECR1-201ENST00000262844 DCAF8L2P0C7V8 631 aa30.13■■■□□ 2.41
AMMECR1-201ENST00000262844 SUPT5HO00267 1087 aaKnown RBP29.07■■■□□ 2.24
AMMECR1-201ENST00000262844 SHROOM4Q9ULL8 1493 aa29.01■■■□□ 2.23
AMMECR1-201ENST00000262844 EHMT2Q96KQ7 1210 aa27.42■■□□□ 1.98
AMMECR1-201ENST00000262844 FAM9AQ8IZU1 332 aaPredicted RBP27.18■■□□□ 1.94
AMMECR1-201ENST00000262844 TRIM41Q8WV44 630 aa27.06■■□□□ 1.92
AMMECR1-201ENST00000262844 PCGF6Q9BYE7 350 aa26.96■■□□□ 1.91
AMMECR1-201ENST00000262844 CHIC1Q5VXU3 224 aa26.73■■□□□ 1.87
AMMECR1-201ENST00000262844 APLP2Q06481 763 aa26.71■■□□□ 1.87
AMMECR1-201ENST00000262844 ABCC9O60706 1549 aa26.47■■□□□ 1.83
AMMECR1-201ENST00000262844 TTBK1Q5TCY1 1321 aaPredicted RBP26.47■■□□□ 1.83
AMMECR1-201ENST00000262844 ZCCHC6Q5VYS8 1495 aaKnown RBP26.44■■□□□ 1.82
AMMECR1-201ENST00000262844 PELP1Q8IZL8 1130 aaKnown RBP26.4■■□□□ 1.82
AMMECR1-201ENST00000262844 UBTFP17480 764 aaKnown RBP26.36■■□□□ 1.81
AMMECR1-201ENST00000262844 CCDC180Q9P1Z9 1646 aa26.35■■□□□ 1.81
AMMECR1-201ENST00000262844 LOC105371045A0A1W2PR82 267 aa26.34■■□□□ 1.81
AMMECR1-201ENST00000262844 ZEB1P37275 1124 aaPredicted RBP26.32■■□□□ 1.8
AMMECR1-201ENST00000262844 RANGAP1P46060 587 aaPredicted RBP26.27■■□□□ 1.8
AMMECR1-201ENST00000262844 TRIM26Q12899 539 aaPredicted RBP26.19■■□□□ 1.78
AMMECR1-201ENST00000262844 CCER1Q8TC90 406 aaPredicted RBP26.13■■□□□ 1.77
AMMECR1-201ENST00000262844 PPARGC1BQ86YN6 1023 aaKnown RBP26.03■■□□□ 1.76
AMMECR1-201ENST00000262844 HRCP23327 699 aa25.99■■□□□ 1.75
AMMECR1-201ENST00000262844 PABPN1Q86U42 306 aaKnown RBP eCLIP25.96■■□□□ 1.75
AMMECR1-201ENST00000262844 ATP1B4Q9UN42 357 aaPredicted RBP25.83■■□□□ 1.73
AMMECR1-201ENST00000262844 SCRIBQ14160 1630 aa25.79■■□□□ 1.72
AMMECR1-201ENST00000262844 CENPBP07199 599 aaPredicted RBP25.57■■□□□ 1.68
AMMECR1-201ENST00000262844 DCAF1Q9Y4B6 1507 aa25.42■■□□□ 1.66
AMMECR1-201ENST00000262844 HNRNPUL2Q1KMD3 747 aaKnown RBP25.38■■□□□ 1.65
AMMECR1-201ENST00000262844 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.29■■□□□ 1.64
AMMECR1-201ENST00000262844 RSF1Q96T23 1441 aaPredicted RBP25.29■■□□□ 1.64
AMMECR1-201ENST00000262844 ITGAEP38570 1179 aa25.27■■□□□ 1.64
AMMECR1-201ENST00000262844 ERICH6Q7L0X2 663 aa25.25■■□□□ 1.63
AMMECR1-201ENST00000262844 NACADO15069 1562 aa25.25■■□□□ 1.63
AMMECR1-201ENST00000262844 CSRNP3Q8WYN3 585 aa25.25■■□□□ 1.63
AMMECR1-201ENST00000262844 RB1CC1Q8TDY2 1594 aa25.23■■□□□ 1.63
AMMECR1-201ENST00000262844 YTHDC1Q96MU7 727 aaKnown RBP25.12■■□□□ 1.61
AMMECR1-201ENST00000262844 MYO15BQ96JP2 1530 aa25.09■■□□□ 1.61
AMMECR1-201ENST00000262844 NEFLP07196 543 aa25.03■■□□□ 1.6
AMMECR1-201ENST00000262844 DIEXFQ68CQ4 756 aaKnown RBP24.87■■□□□ 1.57
AMMECR1-201ENST00000262844 FAM50AQ14320 339 aaKnown RBP24.84■■□□□ 1.57
AMMECR1-201ENST00000262844 CECR2Q9BXF3 1484 aa24.83■■□□□ 1.57
AMMECR1-201ENST00000262844 BAZ1AQ9NRL2 1556 aaPredicted RBP24.75■■□□□ 1.55
AMMECR1-201ENST00000262844 P3H3Q8IVL6 736 aa24.63■■□□□ 1.53
AMMECR1-201ENST00000262844 EEA1Q15075 1411 aa24.61■■□□□ 1.53
AMMECR1-201ENST00000262844 MROH2BQ7Z745 1585 aa24.58■■□□□ 1.53
AMMECR1-201ENST00000262844 BAZ1BQ9UIG0 1483 aaKnown RBP24.55■■□□□ 1.52
AMMECR1-201ENST00000262844 WRNQ14191 1432 aaPredicted RBP eCLIP24.55■■□□□ 1.52
AMMECR1-201ENST00000262844 ZNF316A6NFI3 1004 aaPredicted RBP24.54■■□□□ 1.52
AMMECR1-201ENST00000262844 MYT1LQ9UL68 1186 aa24.53■■□□□ 1.52
AMMECR1-201ENST00000262844 NEUROD1Q13562 356 aa24.52■■□□□ 1.52
AMMECR1-201ENST00000262844 POLR3GLQ9BT43 218 aa24.49■■□□□ 1.51
AMMECR1-201ENST00000262844 TRIM52Q96A61 297 aa24.48■■□□□ 1.51
AMMECR1-201ENST00000262844 CLIP1P30622 1438 aa24.45■■□□□ 1.51
AMMECR1-201ENST00000262844 CEP162Q5TB80 1403 aa24.45■■□□□ 1.5
AMMECR1-201ENST00000262844 GOLGA3Q08378 1498 aa24.45■■□□□ 1.5
AMMECR1-201ENST00000262844 MYT1Q01538 1121 aa24.44■■□□□ 1.5
AMMECR1-201ENST00000262844 FBLN2P98095 1184 aa24.41■■□□□ 1.5
AMMECR1-201ENST00000262844 TNIKQ9UKE5 1360 aa24.39■■□□□ 1.49
AMMECR1-201ENST00000262844 CCDC88BA6NC98 1476 aa24.33■■□□□ 1.48
AMMECR1-201ENST00000262844 CEP164Q9UPV0 1460 aa24.27■■□□□ 1.48
AMMECR1-201ENST00000262844 DAXXQ9UER7 740 aaPredicted RBP24.26■■□□□ 1.47
AMMECR1-201ENST00000262844 ARID3CA6NKF2 412 aa24.26■■□□□ 1.47
AMMECR1-201ENST00000262844 WIZO95785 1651 aa24.25■■□□□ 1.47
AMMECR1-201ENST00000262844 CNGB1Q14028 1251 aaPredicted RBP24.22■■□□□ 1.47
AMMECR1-201ENST00000262844 SOGA1O94964 1423 aa24.22■■□□□ 1.47
AMMECR1-201ENST00000262844 KIF27Q86VH2 1401 aa24.2■■□□□ 1.46
AMMECR1-201ENST00000262844 GTF3C3Q9Y5Q9 886 aa24.16■■□□□ 1.46
AMMECR1-201ENST00000262844 TOP2AP11388 1531 aaKnown RBP24.16■■□□□ 1.46
AMMECR1-201ENST00000262844 CDK11AQ9UQ88 783 aaPredicted RBP24.16■■□□□ 1.46
AMMECR1-201ENST00000262844 ABCC8Q09428 1581 aa24.14■■□□□ 1.45
AMMECR1-201ENST00000262844 ANP32CO43423 234 aa24.12■■□□□ 1.45
AMMECR1-201ENST00000262844 ACIN1Q9UKV3 1341 aaKnown RBP24.1■■□□□ 1.45
AMMECR1-201ENST00000262844 SMARCA2P51531 1590 aa24.09■■□□□ 1.45
AMMECR1-201ENST00000262844 ZNF326Q5BKZ1 582 aaKnown RBP24.02■■□□□ 1.44
AMMECR1-201ENST00000262844 ZNF777Q9ULD5 760 aaPredicted RBP24.02■■□□□ 1.44
AMMECR1-201ENST00000262844 SLC4A1APQ9BWU0 796 aaKnown RBP24■■□□□ 1.43
AMMECR1-201ENST00000262844 MTUS2Q5JR59 1369 aa23.99■■□□□ 1.43
AMMECR1-201ENST00000262844 SMARCA4P51532 1647 aa23.99■■□□□ 1.43
AMMECR1-201ENST00000262844 TONSLQ96HA7 1378 aa23.95■■□□□ 1.42
AMMECR1-201ENST00000262844 ATAD2BQ9ULI0 1458 aa23.88■■□□□ 1.41
AMMECR1-201ENST00000262844 CHIC2Q9UKJ5 165 aa23.88■■□□□ 1.41
AMMECR1-201ENST00000262844 CUX2O14529 1486 aa23.85■■□□□ 1.41
AMMECR1-201ENST00000262844 CHMP7Q8WUX9 453 aaPredicted RBP23.84■■□□□ 1.41
AMMECR1-201ENST00000262844 CARMIL1Q5VZK9 1371 aa23.83■■□□□ 1.41
AMMECR1-201ENST00000262844 VPS8Q8N3P4 1428 aa23.81■■□□□ 1.4
AMMECR1-201ENST00000262844 CLSPNQ9HAW4 1339 aa23.78■■□□□ 1.4
AMMECR1-201ENST00000262844 DDX10Q13206 875 aaKnown RBP23.78■■□□□ 1.4
AMMECR1-201ENST00000262844 BCANQ96GW7 911 aa23.74■■□□□ 1.39
AMMECR1-201ENST00000262844 MIER1Q8N108 512 aa23.73■■□□□ 1.39
AMMECR1-201ENST00000262844 FHAD1B1AJZ9 1412 aa23.7■■□□□ 1.38
AMMECR1-201ENST00000262844 RTL5Q5HYW3 569 aaPredicted RBP23.68■■□□□ 1.38
AMMECR1-201ENST00000262844 CCNB3Q8WWL7 1395 aa23.66■■□□□ 1.38
AMMECR1-201ENST00000262844 RRP7BPQ9NSQ0 103 aa23.66■■□□□ 1.38
AMMECR1-201ENST00000262844 CADPSQ9ULU8 1353 aa23.64■■□□□ 1.37
AMMECR1-201ENST00000262844 RUSC2Q8N2Y8 1516 aa23.64■■□□□ 1.37
AMMECR1-201ENST00000262844 TSPY4P0CV99 314 aa23.63■■□□□ 1.37
AMMECR1-201ENST00000262844 TSPY10P0CW01 314 aa23.63■■□□□ 1.37
AMMECR1-201ENST00000262844 KANK4Q5T7N3 995 aaPredicted RBP23.6■■□□□ 1.37
AMMECR1-201ENST00000262844 RAPGEF2Q9Y4G8 1499 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms