RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 MAPKBP1O60336 1514 aa24.97■■□□□ 1.59
TRAM1-201ENST00000262213 P3H3Q8IVL6 736 aa24.96■■□□□ 1.59
TRAM1-201ENST00000262213 SETD5Q9C0A6 1442 aa24.91■■□□□ 1.58
TRAM1-201ENST00000262213 FKBP8Q14318 412 aa24.9■■□□□ 1.58
TRAM1-201ENST00000262213 PRDM2Q13029 1718 aa24.9■■□□□ 1.58
TRAM1-201ENST00000262213 WDR97A6NE52 1622 aa24.88■■□□□ 1.57
TRAM1-201ENST00000262213 PHLDB1Q86UU1 1377 aa24.88■■□□□ 1.57
TRAM1-201ENST00000262213 TIAM1Q13009 1591 aa24.87■■□□□ 1.57
TRAM1-201ENST00000262213 IGF1RP08069 1367 aa24.87■■□□□ 1.57
TRAM1-201ENST00000262213 CADPSQ9ULU8 1353 aa24.85■■□□□ 1.57
TRAM1-201ENST00000262213 CARMIL1Q5VZK9 1371 aa24.81■■□□□ 1.56
TRAM1-201ENST00000262213 LRRC9Q6ZRR7 1453 aa24.81■■□□□ 1.56
TRAM1-201ENST00000262213 TRIM52Q96A61 297 aa24.8■■□□□ 1.56
TRAM1-201ENST00000262213 PPP1R15AO75807 674 aaPredicted RBP24.74■■□□□ 1.55
TRAM1-201ENST00000262213 ANP32EQ9BTT0 268 aa24.74■■□□□ 1.55
TRAM1-201ENST00000262213 NEFLP07196 543 aa24.71■■□□□ 1.55
TRAM1-201ENST00000262213 ANP32CO43423 234 aa24.69■■□□□ 1.54
TRAM1-201ENST00000262213 MAP3K1Q13233 1512 aa24.68■■□□□ 1.54
TRAM1-201ENST00000262213 FGD5Q6ZNL6 1462 aa24.68■■□□□ 1.54
TRAM1-201ENST00000262213 PCF11O94913 1555 aaKnown RBP24.66■■□□□ 1.54
TRAM1-201ENST00000262213 FHOD3Q2V2M9 1422 aa24.66■■□□□ 1.54
TRAM1-201ENST00000262213 FHAD1B1AJZ9 1412 aa24.65■■□□□ 1.54
TRAM1-201ENST00000262213 DNAJC5BQ9UF47 199 aa24.65■■□□□ 1.54
TRAM1-201ENST00000262213 NESP48681 1621 aa24.62■■□□□ 1.53
TRAM1-201ENST00000262213 LAMC3Q9Y6N6 1575 aa24.61■■□□□ 1.53
TRAM1-201ENST00000262213 FANCD2Q9BXW9 1451 aa24.59■■□□□ 1.53
TRAM1-201ENST00000262213 TONSLQ96HA7 1378 aa24.58■■□□□ 1.53
TRAM1-201ENST00000262213 TIMELESSQ9UNS1 1208 aa24.57■■□□□ 1.52
TRAM1-201ENST00000262213 CFAP43Q8NDM7 1665 aa24.57■■□□□ 1.52
TRAM1-201ENST00000262213 CCER2I3L3R5 266 aa24.56■■□□□ 1.52
TRAM1-201ENST00000262213 RBM19Q9Y4C8 960 aaKnown RBP24.54■■□□□ 1.52
TRAM1-201ENST00000262213 RAD54L2Q9Y4B4 1467 aa24.48■■□□□ 1.51
TRAM1-201ENST00000262213 IRX6P78412 446 aaPredicted RBP24.47■■□□□ 1.51
TRAM1-201ENST00000262213 CCDC18Q5T9S5 1454 aa24.45■■□□□ 1.5
TRAM1-201ENST00000262213 FYCO1Q9BQS8 1478 aa24.44■■□□□ 1.5
TRAM1-201ENST00000262213 FGD6Q6ZV73 1430 aa24.43■■□□□ 1.5
TRAM1-201ENST00000262213 HNRNPUQ00839 825 aaKnown RBP eCLIP24.43■■□□□ 1.5
TRAM1-201ENST00000262213 MTUS2Q5JR59 1369 aa24.43■■□□□ 1.5
TRAM1-201ENST00000262213 CASKIN1Q8WXD9 1431 aa24.42■■□□□ 1.5
TRAM1-201ENST00000262213 DNMBPQ6XZF7 1577 aa24.41■■□□□ 1.5
TRAM1-201ENST00000262213 PTPRKQ15262 1439 aa24.4■■□□□ 1.5
TRAM1-201ENST00000262213 PDS5BQ9NTI5 1447 aa24.38■■□□□ 1.49
TRAM1-201ENST00000262213 TOPBP1Q92547 1522 aa24.35■■□□□ 1.49
TRAM1-201ENST00000262213 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.34■■□□□ 1.491e-6■□□□□ 9.9
TRAM1-201ENST00000262213 KIF21AQ7Z4S6 1674 aa24.34■■□□□ 1.49
TRAM1-201ENST00000262213 CHIC2Q9UKJ5 165 aa24.34■■□□□ 1.49
TRAM1-201ENST00000262213 UACAQ9BZF9 1416 aa24.33■■□□□ 1.49
TRAM1-201ENST00000262213 RRP7BPQ9NSQ0 103 aa24.33■■□□□ 1.49
TRAM1-201ENST00000262213 EFCAB5A4FU69 1503 aa24.32■■□□□ 1.48
TRAM1-201ENST00000262213 HFM1A2PYH4 1435 aa24.3■■□□□ 1.48
TRAM1-201ENST00000262213 URB2Q14146 1524 aaKnown RBP24.3■■□□□ 1.48
TRAM1-201ENST00000262213 AQRO60306 1485 aaKnown RBP eCLIP24.3■■□□□ 1.485e-8■■■■■ 33.4
TRAM1-201ENST00000262213 PTPN23Q9H3S7 1636 aa24.3■■□□□ 1.48
TRAM1-201ENST00000262213 FMN1Q68DA7 1419 aa24.3■■□□□ 1.48
TRAM1-201ENST00000262213 POLA1P09884 1462 aaPredicted RBP24.29■■□□□ 1.48
TRAM1-201ENST00000262213 NAIPQ13075 1403 aa24.27■■□□□ 1.48
TRAM1-201ENST00000262213 HSPA5P11021 654 aaKnown RBP24.27■■□□□ 1.48
TRAM1-201ENST00000262213 ABCA10Q8WWZ4 1543 aa24.25■■□□□ 1.47
TRAM1-201ENST00000262213 CTTNBP2Q8WZ74 1663 aa24.24■■□□□ 1.47
TRAM1-201ENST00000262213 SNAPC4Q5SXM2 1469 aa24.24■■□□□ 1.47
TRAM1-201ENST00000262213 MSH5O43196 834 aa24.24■■□□□ 1.47
TRAM1-201ENST00000262213 NCOA2Q15596 1464 aa24.24■■□□□ 1.47
TRAM1-201ENST00000262213 WASHC2AQ641Q2 1341 aa24.24■■□□□ 1.47
TRAM1-201ENST00000262213 BCL11AQ9H165 835 aa24.24■■□□□ 1.47
TRAM1-201ENST00000262213 MYOM3Q5VTT5 1437 aa24.21■■□□□ 1.47
TRAM1-201ENST00000262213 CCDC184Q52MB2 194 aa24.2■■□□□ 1.47
TRAM1-201ENST00000262213 CDK11AQ9UQ88 783 aaPredicted RBP24.2■■□□□ 1.47
TRAM1-201ENST00000262213 TDRD9Q8NDG6 1382 aaKnown RBP24.19■■□□□ 1.46
TRAM1-201ENST00000262213 ARID3CA6NKF2 412 aa24.18■■□□□ 1.46
TRAM1-201ENST00000262213 FOXD1Q16676 465 aa24.17■■□□□ 1.46
TRAM1-201ENST00000262213 CUL7Q14999 1698 aa24.17■■□□□ 1.46
TRAM1-201ENST00000262213 FAM9BQ8IZU0 186 aa24.16■■□□□ 1.46
TRAM1-201ENST00000262213 LRRIQ1Q96JM4 1722 aa24.16■■□□□ 1.46
TRAM1-201ENST00000262213 KDM5BQ9UGL1 1544 aa24.16■■□□□ 1.46
TRAM1-201ENST00000262213 EIF4G2P78344 907 aaKnown RBP eCLIP24.14■■□□□ 1.46
TRAM1-201ENST00000262213 ERICH6Q7L0X2 663 aa24.11■■□□□ 1.45
TRAM1-201ENST00000262213 CNGB1Q14028 1251 aaPredicted RBP24.1■■□□□ 1.45
TRAM1-201ENST00000262213 SUPT6HQ7KZ85 1726 aaKnown RBP24.1■■□□□ 1.45
TRAM1-201ENST00000262213 MRC2Q9UBG0 1479 aa24.1■■□□□ 1.45
TRAM1-201ENST00000262213 C11orf95C9JLR9 678 aaPredicted RBP24.08■■□□□ 1.45
TRAM1-201ENST00000262213 GRIN2BQ13224 1484 aa24.08■■□□□ 1.45
TRAM1-201ENST00000262213 L3MBTL2Q969R5 705 aa24.08■■□□□ 1.45
TRAM1-201ENST00000262213 MRS2Q9HD23 443 aa24.06■■□□□ 1.44
TRAM1-201ENST00000262213 MPHOSPH9Q99550 1183 aa24.05■■□□□ 1.44
TRAM1-201ENST00000262213 EHBP1L1Q8N3D4 1523 aa24.04■■□□□ 1.44
TRAM1-201ENST00000262213 B4GALNT3Q6L9W6 998 aa24.03■■□□□ 1.44
TRAM1-201ENST00000262213 MAGI3Q5TCQ9 1506 aa24.03■■□□□ 1.44
TRAM1-201ENST00000262213 SAMD9Q5K651 1589 aa24.03■■□□□ 1.44
TRAM1-201ENST00000262213 DENND4BO75064 1496 aaPredicted RBP24.03■■□□□ 1.44
TRAM1-201ENST00000262213 KDM6BO15054 1643 aa24.03■■□□□ 1.44
TRAM1-201ENST00000262213 CNTLNQ9NXG0 1405 aa24.02■■□□□ 1.44
TRAM1-201ENST00000262213 PPP4R2Q9NY27 417 aa24.02■■□□□ 1.44
TRAM1-201ENST00000262213 FANCIQ9NVI1 1328 aa24.01■■□□□ 1.43
TRAM1-201ENST00000262213 PRKRIP1Q9H875 184 aaPredicted RBP24.01■■□□□ 1.43
TRAM1-201ENST00000262213 UGGT2Q9NYU1 1516 aa24■■□□□ 1.43
TRAM1-201ENST00000262213 TARBP1Q13395 1621 aaKnown RBP24■■□□□ 1.43
TRAM1-201ENST00000262213 ABCA5Q8WWZ7 1642 aa23.99■■□□□ 1.43
TRAM1-201ENST00000262213 WDR62O43379 1518 aa23.99■■□□□ 1.43
TRAM1-201ENST00000262213 GAPVD1Q14C86 1478 aa23.99■■□□□ 1.43
TRAM1-201ENST00000262213 CCDC7Q96M83 1385 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms