RNA–Protein interactions for RNA: ENST00000261024.6

SLC40A1-201, Transcript of solute carrier family 40 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC40A1, Length 3,442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC40A1-201ENST00000261024 B4GALNT3Q6L9W6 998 aa20.71■□□□□ 0.91
SLC40A1-201ENST00000261024 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.69■□□□□ 0.9
SLC40A1-201ENST00000261024 WDR97A6NE52 1622 aa20.69■□□□□ 0.9
SLC40A1-201ENST00000261024 IL27Q8NEV9 243 aa20.69■□□□□ 0.9
SLC40A1-201ENST00000261024 RAB3GAP2Q9H2M9 1393 aa20.68■□□□□ 0.9
SLC40A1-201ENST00000261024 PPP4R2Q9NY27 417 aa20.67■□□□□ 0.9
SLC40A1-201ENST00000261024 ERICH6BQ5W0A0 696 aa20.65■□□□□ 0.9
SLC40A1-201ENST00000261024 CCNB3Q8WWL7 1395 aa20.65■□□□□ 0.9
SLC40A1-201ENST00000261024 MAPKBP1O60336 1514 aa20.61■□□□□ 0.89
SLC40A1-201ENST00000261024 RRBP1Q9P2E9 1410 aaKnown RBP20.6■□□□□ 0.89
SLC40A1-201ENST00000261024 BAZ1BQ9UIG0 1483 aaKnown RBP20.6■□□□□ 0.89
SLC40A1-201ENST00000261024 CUX2O14529 1486 aa20.54■□□□□ 0.88
SLC40A1-201ENST00000261024 ANP32AP39687 249 aaKnown RBP20.53■□□□□ 0.88
SLC40A1-201ENST00000261024 ZBTB47Q9UFB7 747 aaPredicted RBP20.51■□□□□ 0.87
SLC40A1-201ENST00000261024 SYNJ1O43426 1573 aa20.51■□□□□ 0.87
SLC40A1-201ENST00000261024 FAM50AQ14320 339 aaKnown RBP20.49■□□□□ 0.87
SLC40A1-201ENST00000261024 ARAP1Q96P48 1450 aa20.48■□□□□ 0.87
SLC40A1-201ENST00000261024 IPO9Q96P70 1041 aaKnown RBP20.46■□□□□ 0.87
SLC40A1-201ENST00000261024 SETD5Q9C0A6 1442 aa20.46■□□□□ 0.87
SLC40A1-201ENST00000261024 FAM9BQ8IZU0 186 aa20.44■□□□□ 0.86
SLC40A1-201ENST00000261024 SMARCA4P51532 1647 aa20.43■□□□□ 0.86
SLC40A1-201ENST00000261024 EIF5BO60841 1220 aaKnown RBP20.42■□□□□ 0.86
SLC40A1-201ENST00000261024 UBE2Q2Q8WVN8 375 aa20.4■□□□□ 0.86
SLC40A1-201ENST00000261024 NPM2Q86SE8 214 aaKnown RBP20.39■□□□□ 0.85
SLC40A1-201ENST00000261024 TONSLQ96HA7 1378 aa20.38■□□□□ 0.85
SLC40A1-201ENST00000261024 TIMELESSQ9UNS1 1208 aa20.37■□□□□ 0.85
SLC40A1-201ENST00000261024 LAS1LQ9Y4W2 734 aaKnown RBP20.37■□□□□ 0.85
SLC40A1-201ENST00000261024 CCDC184Q52MB2 194 aa20.36■□□□□ 0.85
SLC40A1-201ENST00000261024 NEFMP07197 916 aa20.34■□□□□ 0.85
SLC40A1-201ENST00000261024 MRS2Q9HD23 443 aa20.28■□□□□ 0.84
SLC40A1-201ENST00000261024 ATP1B4Q9UN42 357 aaPredicted RBP20.26■□□□□ 0.83
SLC40A1-201ENST00000261024 CNGB1Q14028 1251 aaPredicted RBP20.25■□□□□ 0.83
SLC40A1-201ENST00000261024 SENP3-EIF4A1A0A087X0R7 540 aa20.24■□□□□ 0.83
SLC40A1-201ENST00000261024 BRPF3Q9ULD4 1205 aa20.24■□□□□ 0.83
SLC40A1-201ENST00000261024 WASHC2AQ641Q2 1341 aa20.22■□□□□ 0.83
SLC40A1-201ENST00000261024 ZBED9Q6R2W3 1325 aa20.21■□□□□ 0.83
SLC40A1-201ENST00000261024 PHLDB1Q86UU1 1377 aa20.2■□□□□ 0.82
SLC40A1-201ENST00000261024 AKNAQ7Z591 1439 aa20.19■□□□□ 0.82
SLC40A1-201ENST00000261024 PRXQ9BXM0 1461 aa20.18■□□□□ 0.82
SLC40A1-201ENST00000261024 HSPA5P11021 654 aaKnown RBP20.17■□□□□ 0.82
SLC40A1-201ENST00000261024 ARHGAP35Q9NRY4 1499 aa20.16■□□□□ 0.82
SLC40A1-201ENST00000261024 ERICH3Q5RHP9 1530 aa20.16■□□□□ 0.82
SLC40A1-201ENST00000261024 PRKRIP1Q9H875 184 aaPredicted RBP20.13■□□□□ 0.81
SLC40A1-201ENST00000261024 USP35Q9P2H5 1018 aa20.12■□□□□ 0.81
SLC40A1-201ENST00000261024 C11orf95C9JLR9 678 aaPredicted RBP20.09■□□□□ 0.81
SLC40A1-201ENST00000261024 WASHC2CQ9Y4E1 1318 aa20.08■□□□□ 0.8
SLC40A1-201ENST00000261024 PPM1GO15355 546 aaPredicted RBP20.07■□□□□ 0.8
SLC40A1-201ENST00000261024 EIF4G2P78344 907 aaKnown RBP eCLIP20.07■□□□□ 0.8
SLC40A1-201ENST00000261024 FHAD1B1AJZ9 1412 aa20.06■□□□□ 0.8
SLC40A1-201ENST00000261024 P3H3Q8IVL6 736 aa20.06■□□□□ 0.8
SLC40A1-201ENST00000261024 TIAM1Q13009 1591 aa20.05■□□□□ 0.8
SLC40A1-201ENST00000261024 GSE1Q14687 1217 aa20.05■□□□□ 0.8
SLC40A1-201ENST00000261024 LRRC9Q6ZRR7 1453 aa20.04■□□□□ 0.8
SLC40A1-201ENST00000261024 CNTLNQ9NXG0 1405 aa20.04■□□□□ 0.8
SLC40A1-201ENST00000261024 NUDCQ9Y266 331 aa20.03■□□□□ 0.8
SLC40A1-201ENST00000261024 PABPN1Q86U42 306 aaKnown RBP eCLIP20.02■□□□□ 0.8
SLC40A1-201ENST00000261024 PDE4AP27815 886 aa20.01■□□□□ 0.79
SLC40A1-201ENST00000261024 TOP2BQ02880 1626 aa20.01■□□□□ 0.79
SLC40A1-201ENST00000261024 FRAT1Q92837 279 aaPredicted RBP19.97■□□□□ 0.79
SLC40A1-201ENST00000261024 POLR3GLQ9BT43 218 aa19.97■□□□□ 0.79
SLC40A1-201ENST00000261024 SMG6Q86US8 1419 aaKnown RBP19.97■□□□□ 0.79
SLC40A1-201ENST00000261024 KIF27Q86VH2 1401 aa19.96■□□□□ 0.79
SLC40A1-201ENST00000261024 PKNOX2Q96KN3 472 aa19.96■□□□□ 0.79
SLC40A1-201ENST00000261024 CCDC18Q5T9S5 1454 aa19.96■□□□□ 0.79
SLC40A1-201ENST00000261024 SLC4A3P48751 1232 aa19.94■□□□□ 0.78
SLC40A1-201ENST00000261024 TCERG1O14776 1098 aaKnown RBP19.93■□□□□ 0.78
SLC40A1-201ENST00000261024 NFKBIBQ15653 356 aa19.93■□□□□ 0.78
SLC40A1-201ENST00000261024 PEG3Q9GZU2 1588 aa19.92■□□□□ 0.78
SLC40A1-201ENST00000261024 BACH2Q9BYV9 841 aa19.91■□□□□ 0.78
SLC40A1-201ENST00000261024 DAXXQ9UER7 740 aaPredicted RBP19.91■□□□□ 0.78
SLC40A1-201ENST00000261024 CCDC7Q96M83 1385 aa19.91■□□□□ 0.78
SLC40A1-201ENST00000261024 EXOC6Q8TAG9 804 aa19.9■□□□□ 0.78
SLC40A1-201ENST00000261024 UACAQ9BZF9 1416 aa19.9■□□□□ 0.78
SLC40A1-201ENST00000261024 NCAPD3P42695 1498 aa19.9■□□□□ 0.78
SLC40A1-201ENST00000261024 RSPH6AQ9H0K4 717 aa19.89■□□□□ 0.77
SLC40A1-201ENST00000261024 RNF123Q5XPI4 1314 aa19.89■□□□□ 0.77
SLC40A1-201ENST00000261024 NCOA2Q15596 1464 aa19.89■□□□□ 0.77
SLC40A1-201ENST00000261024 SKAP1Q86WV1 359 aa19.86■□□□□ 0.77
SLC40A1-201ENST00000261024 MAP3K1Q13233 1512 aa19.86■□□□□ 0.77
SLC40A1-201ENST00000261024 DDRGK1Q96HY6 314 aa19.85■□□□□ 0.77
SLC40A1-201ENST00000261024 AQRO60306 1485 aaKnown RBP eCLIP19.82■□□□□ 0.762e-6■■■■□ 19.6
SLC40A1-201ENST00000261024 KDM5BQ9UGL1 1544 aa19.82■□□□□ 0.76
SLC40A1-201ENST00000261024 L3MBTL2Q969R5 705 aa19.82■□□□□ 0.76
SLC40A1-201ENST00000261024 KIF7Q2M1P5 1343 aa19.81■□□□□ 0.76
SLC40A1-201ENST00000261024 BIVM-ERCC5R4GMW8 1640 aa19.81■□□□□ 0.76
SLC40A1-201ENST00000261024 RRP7BPQ9NSQ0 103 aa19.81■□□□□ 0.76
SLC40A1-201ENST00000261024 NCOA1Q15788 1441 aa19.8■□□□□ 0.76
SLC40A1-201ENST00000261024 RRP1P56182 461 aaKnown RBP19.8■□□□□ 0.76
SLC40A1-201ENST00000261024 CHIC2Q9UKJ5 165 aa19.79■□□□□ 0.76
SLC40A1-201ENST00000261024 FOXD1Q16676 465 aa19.79■□□□□ 0.76
SLC40A1-201ENST00000261024 PTPRKQ15262 1439 aa19.77■□□□□ 0.76
SLC40A1-201ENST00000261024 TMC1Q8TDI8 760 aa19.77■□□□□ 0.76
SLC40A1-201ENST00000261024 FAM43AQ8N2R8 423 aa19.77■□□□□ 0.76
SLC40A1-201ENST00000261024 HFM1A2PYH4 1435 aa19.77■□□□□ 0.76
SLC40A1-201ENST00000261024 MS4A1P11836 297 aa19.77■□□□□ 0.75
SLC40A1-201ENST00000261024 GLIPR1L2Q4G1C9 344 aa19.77■□□□□ 0.75
SLC40A1-201ENST00000261024 DCAF11Q8TEB1 546 aa19.76■□□□□ 0.75
SLC40A1-201ENST00000261024 FRAT2O75474 233 aaPredicted RBP19.76■□□□□ 0.75
SLC40A1-201ENST00000261024 VSIG10Q8N0Z9 540 aa19.75■□□□□ 0.75
SLC40A1-201ENST00000261024 FGD6Q6ZV73 1430 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms