RNA–Protein interactions for RNA: ENST00000248566.3

SEM1-201, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEM1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-201ENST00000248566 GRIN2AQ12879 1464 aa21.78■■□□□ 1.08
SEM1-201ENST00000248566 DMRT2Q9Y5R5 561 aa21.77■■□□□ 1.07
SEM1-201ENST00000248566 FHAD1B1AJZ9 1412 aa21.77■■□□□ 1.07
SEM1-201ENST00000248566 ARAP1Q96P48 1450 aa21.73■■□□□ 1.07
SEM1-201ENST00000248566 KIF27Q86VH2 1401 aa21.69■■□□□ 1.06
SEM1-201ENST00000248566 CEP170Q5SW79 1584 aa21.68■■□□□ 1.06
SEM1-201ENST00000248566 NUP160Q12769 1436 aa21.64■■□□□ 1.06
SEM1-201ENST00000248566 SCAF1Q9H7N4 1312 aaKnown RBP21.6■■□□□ 1.05
SEM1-201ENST00000248566 IGF1RP08069 1367 aa21.6■■□□□ 1.05
SEM1-201ENST00000248566 CUL7Q14999 1698 aa21.56■■□□□ 1.04
SEM1-201ENST00000248566 ERCC6L2Q5T890 1561 aa21.55■■□□□ 1.04
SEM1-201ENST00000248566 TRHP20396 242 aaPredicted RBP21.53■■□□□ 1.04
SEM1-201ENST00000248566 JPH4Q96JJ6 628 aa21.51■■□□□ 1.03
SEM1-201ENST00000248566 CARMIL1Q5VZK9 1371 aa21.5■■□□□ 1.03
SEM1-201ENST00000248566 SHROOM2Q13796 1616 aa21.5■■□□□ 1.03
SEM1-201ENST00000248566 PRG4Q92954 1404 aaPredicted RBP21.48■■□□□ 1.03
SEM1-201ENST00000248566 RUSC2Q8N2Y8 1516 aa21.48■■□□□ 1.03
SEM1-201ENST00000248566 KIAA0586Q9BVV6 1533 aa21.41■■□□□ 1.02
SEM1-201ENST00000248566 RAPGEF2Q9Y4G8 1499 aa21.34■■□□□ 1.01
SEM1-201ENST00000248566 TTBK1Q5TCY1 1321 aaPredicted RBP21.33■■□□□ 1.01
SEM1-201ENST00000248566 IQGAP2Q13576 1575 aa21.28■■□□□ 1
SEM1-201ENST00000248566 CARMIL2Q6F5E8 1435 aa21.24■□□□□ 0.99
SEM1-201ENST00000248566 NPM1P06748 294 aaKnown RBP eCLIP21.24■□□□□ 0.99
SEM1-201ENST00000248566 PTPRGP23470 1445 aa21.19■□□□□ 0.98
SEM1-201ENST00000248566 FAM9AQ8IZU1 332 aaPredicted RBP21.18■□□□□ 0.98
SEM1-201ENST00000248566 TNIKQ9UKE5 1360 aa21.16■□□□□ 0.98
SEM1-201ENST00000248566 CTTNBP2Q8WZ74 1663 aa21.16■□□□□ 0.98
SEM1-201ENST00000248566 CSRNP3Q8WYN3 585 aa21.16■□□□□ 0.98
SEM1-201ENST00000248566 ADCY10Q96PN6 1610 aa21.16■□□□□ 0.98
SEM1-201ENST00000248566 PRXQ9BXM0 1461 aa21.15■□□□□ 0.98
SEM1-201ENST00000248566 DISP1Q96F81 1524 aa21.12■□□□□ 0.97
SEM1-201ENST00000248566 UGGT2Q9NYU1 1516 aa21.11■□□□□ 0.97
SEM1-201ENST00000248566 EEA1Q15075 1411 aa21.08■□□□□ 0.96
SEM1-201ENST00000248566 KIAA0556O60303 1618 aa21.07■□□□□ 0.96
SEM1-201ENST00000248566 FAM69CQ0P6D2 419 aa21.04■□□□□ 0.96
SEM1-201ENST00000248566 KIF13AQ9H1H9 1805 aa21.03■□□□□ 0.96
SEM1-201ENST00000248566 UACAQ9BZF9 1416 aa21.03■□□□□ 0.96
SEM1-201ENST00000248566 MAPKBP1O60336 1514 aa21.02■□□□□ 0.96
SEM1-201ENST00000248566 GOLGA3Q08378 1498 aa21.02■□□□□ 0.96
SEM1-201ENST00000248566 RANGAP1P46060 587 aaPredicted RBP21.02■□□□□ 0.95
SEM1-201ENST00000248566 EHMT2Q96KQ7 1210 aa21.01■□□□□ 0.95
SEM1-201ENST00000248566 P3H3Q8IVL6 736 aa21■□□□□ 0.95
SEM1-201ENST00000248566 ABCC2Q92887 1545 aa20.99■□□□□ 0.95
SEM1-201ENST00000248566 ABCC10Q5T3U5 1492 aa20.99■□□□□ 0.95
SEM1-201ENST00000248566 PPP4R3CPQ6ZMV5 832 aa20.98■□□□□ 0.95
SEM1-201ENST00000248566 UHRF1BP1LA0JNW5 1464 aa20.96■□□□□ 0.95
SEM1-201ENST00000248566 DIP2BQ9P265 1576 aa20.95■□□□□ 0.94
SEM1-201ENST00000248566 PLB1Q6P1J6 1458 aa20.92■□□□□ 0.94
SEM1-201ENST00000248566 ASXL2Q76L83 1435 aa20.91■□□□□ 0.94
SEM1-201ENST00000248566 CACNB1Q02641 598 aaPredicted RBP20.9■□□□□ 0.94
SEM1-201ENST00000248566 ZCCHC11Q5TAX3 1644 aaKnown RBP20.89■□□□□ 0.93
SEM1-201ENST00000248566 TSPOAP1O95153 1857 aa20.89■□□□□ 0.93
SEM1-201ENST00000248566 KIF21BO75037 1637 aa20.88■□□□□ 0.93
SEM1-201ENST00000248566 KDM5BQ9UGL1 1544 aa20.88■□□□□ 0.93
SEM1-201ENST00000248566 ARID3CA6NKF2 412 aa20.86■□□□□ 0.93
SEM1-201ENST00000248566 UBTFP17480 764 aaKnown RBP20.86■□□□□ 0.93
SEM1-201ENST00000248566 HOXD11P31277 338 aaPredicted RBP20.85■□□□□ 0.93
SEM1-201ENST00000248566 ABCA8O94911 1581 aa20.84■□□□□ 0.93
SEM1-201ENST00000248566 SAMD9Q5K651 1589 aa20.82■□□□□ 0.92
SEM1-201ENST00000248566 DCAF8L1A6NGE4 600 aa20.78■□□□□ 0.92
SEM1-201ENST00000248566 KCNH8Q96L42 1107 aa20.78■□□□□ 0.92
SEM1-201ENST00000248566 FHOD3Q2V2M9 1422 aa20.78■□□□□ 0.92
SEM1-201ENST00000248566 EPRSP07814 1512 aaKnown RBP20.77■□□□□ 0.92
SEM1-201ENST00000248566 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.76■□□□□ 0.91
SEM1-201ENST00000248566 HNRNPUL2Q1KMD3 747 aaKnown RBP20.76■□□□□ 0.91
SEM1-201ENST00000248566 WDR7Q9Y4E6 1490 aa20.75■□□□□ 0.91
SEM1-201ENST00000248566 GLI2P10070 1586 aa20.75■□□□□ 0.91
SEM1-201ENST00000248566 KDM6BO15054 1643 aa20.73■□□□□ 0.91
SEM1-201ENST00000248566 RAPGEF6Q8TEU7 1601 aa20.72■□□□□ 0.91
SEM1-201ENST00000248566 EFCAB5A4FU69 1503 aa20.7■□□□□ 0.9
SEM1-201ENST00000248566 ATP10BO94823 1461 aa20.69■□□□□ 0.9
SEM1-201ENST00000248566 MAP3K4Q9Y6R4 1608 aa20.68■□□□□ 0.9
SEM1-201ENST00000248566 PPRC1Q5VV67 1664 aaKnown RBP20.68■□□□□ 0.9
SEM1-201ENST00000248566 CNKSR2Q8WXI2 1034 aa20.67■□□□□ 0.9
SEM1-201ENST00000248566 ATP1B4Q9UN42 357 aaPredicted RBP20.65■□□□□ 0.9
SEM1-201ENST00000248566 TEX14Q8IWB6 1497 aa20.63■□□□□ 0.89
SEM1-201ENST00000248566 CD109Q6YHK3 1445 aa20.62■□□□□ 0.89
SEM1-201ENST00000248566 NUP153P49790 1475 aaKnown RBP20.62■□□□□ 0.89
SEM1-201ENST00000248566 RNF39Q9H2S5 420 aa20.6■□□□□ 0.89
SEM1-201ENST00000248566 CFAP43Q8NDM7 1665 aa20.6■□□□□ 0.89
SEM1-201ENST00000248566 RNF216Q9NWF9 866 aaPredicted RBP20.58■□□□□ 0.89
SEM1-201ENST00000248566 ARHGAP35Q9NRY4 1499 aa20.58■□□□□ 0.88
SEM1-201ENST00000248566 PLEKHD1A6NEE1 506 aa20.55■□□□□ 0.88
SEM1-201ENST00000248566 FMN1Q68DA7 1419 aa20.54■□□□□ 0.88
SEM1-201ENST00000248566 MAGI3Q5TCQ9 1506 aa20.52■□□□□ 0.88
SEM1-201ENST00000248566 COL17A1Q9UMD9 1497 aaPredicted RBP20.52■□□□□ 0.88
SEM1-201ENST00000248566 CDK13Q14004 1512 aaKnown RBP20.51■□□□□ 0.87
SEM1-201ENST00000248566 ABCA9Q8IUA7 1624 aa20.49■□□□□ 0.87
SEM1-201ENST00000248566 HECW1Q76N89 1606 aa20.48■□□□□ 0.87
SEM1-201ENST00000248566 CLIP1P30622 1438 aa20.42■□□□□ 0.86
SEM1-201ENST00000248566 CDK11AQ9UQ88 783 aaPredicted RBP20.41■□□□□ 0.86
SEM1-201ENST00000248566 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.39■□□□□ 0.85
SEM1-201ENST00000248566 PCF11O94913 1555 aaKnown RBP20.37■□□□□ 0.85
SEM1-201ENST00000248566 TTC37Q6PGP7 1564 aa20.36■□□□□ 0.85
SEM1-201ENST00000248566 ARAP3Q8WWN8 1544 aa20.35■□□□□ 0.85
SEM1-201ENST00000248566 PHLDB1Q86UU1 1377 aa20.35■□□□□ 0.85
SEM1-201ENST00000248566 KDM4FA0A1W2PPD8 638 aa20.35■□□□□ 0.85
SEM1-201ENST00000248566 LRRIQ1Q96JM4 1722 aa20.35■□□□□ 0.85
SEM1-201ENST00000248566 NEO1Q92859 1461 aa20.35■□□□□ 0.85
SEM1-201ENST00000248566 RAPGEF3O95398 923 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms