RNA–Protein interactions for RNA: ENST00000248566.3

SEM1-201, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEM1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-201ENST00000248566 AEBP2Q6ZN18 517 aaPredicted RBP32.22■■■□□ 2.75
SEM1-201ENST00000248566 NISCHQ9Y2I1 1504 aa30.85■■■□□ 2.53
SEM1-201ENST00000248566 CHIC1Q5VXU3 224 aa30.24■■■□□ 2.43
SEM1-201ENST00000248566 CCDC180Q9P1Z9 1646 aa27.5■■□□□ 1.99
SEM1-201ENST00000248566 SENP3Q9H4L4 574 aaPredicted RBP27.48■■□□□ 1.99
SEM1-201ENST00000248566 ABCC9O60706 1549 aa27.25■■□□□ 1.95
SEM1-201ENST00000248566 PHF23Q9BUL5 403 aaPredicted RBP27.11■■□□□ 1.93
SEM1-201ENST00000248566 DCAF8L2P0C7V8 631 aa26.11■■□□□ 1.77
SEM1-201ENST00000248566 RB1CC1Q8TDY2 1594 aa26.04■■□□□ 1.76
SEM1-201ENST00000248566 NACADO15069 1562 aa25.92■■□□□ 1.74
SEM1-201ENST00000248566 FOXD1Q16676 465 aa25.69■■□□□ 1.7
SEM1-201ENST00000248566 ZCCHC6Q5VYS8 1495 aaKnown RBP25.63■■□□□ 1.69
SEM1-201ENST00000248566 MYO15BQ96JP2 1530 aa25.59■■□□□ 1.69
SEM1-201ENST00000248566 PABPN1Q86U42 306 aaKnown RBP eCLIP25.46■■□□□ 1.67
SEM1-201ENST00000248566 UNC13AQ9UPW8 1703 aa25.45■■□□□ 1.66
SEM1-201ENST00000248566 DCAF1Q9Y4B6 1507 aa25.42■■□□□ 1.66
SEM1-201ENST00000248566 BICRAQ9NZM4 1560 aa25.22■■□□□ 1.63
SEM1-201ENST00000248566 SCRIBQ14160 1630 aa25.19■■□□□ 1.62
SEM1-201ENST00000248566 DNAJC5BQ9UF47 199 aa25.18■■□□□ 1.62
SEM1-201ENST00000248566 SHROOM4Q9ULL8 1493 aa24.86■■□□□ 1.57
SEM1-201ENST00000248566 EIF4G1Q04637 1599 aaKnown RBP24.61■■□□□ 1.53
SEM1-201ENST00000248566 CC2D2AQ9P2K1 1620 aa24.59■■□□□ 1.53
SEM1-201ENST00000248566 CECR2Q9BXF3 1484 aa24.47■■□□□ 1.51
SEM1-201ENST00000248566 POTEDQ86YR6 584 aa24.17■■□□□ 1.46
SEM1-201ENST00000248566 MSH5O43196 834 aa24.14■■□□□ 1.46
SEM1-201ENST00000248566 SMARCA4P51532 1647 aa24■■□□□ 1.43
SEM1-201ENST00000248566 PLPPR3Q6T4P5 718 aa23.98■■□□□ 1.43
SEM1-201ENST00000248566 BAZ1AQ9NRL2 1556 aaPredicted RBP23.93■■□□□ 1.42
SEM1-201ENST00000248566 ATAD2BQ9ULI0 1458 aa23.91■■□□□ 1.42
SEM1-201ENST00000248566 NCAPD3P42695 1498 aa23.9■■□□□ 1.42
SEM1-201ENST00000248566 SMARCA2P51531 1590 aa23.88■■□□□ 1.41
SEM1-201ENST00000248566 PIAS4Q8N2W9 510 aaPredicted RBP23.87■■□□□ 1.41
SEM1-201ENST00000248566 MROH2BQ7Z745 1585 aa23.8■■□□□ 1.4
SEM1-201ENST00000248566 PPP6R1Q9UPN7 881 aa23.78■■□□□ 1.4
SEM1-201ENST00000248566 HMGXB3Q12766 1538 aa23.77■■□□□ 1.39
SEM1-201ENST00000248566 BAZ1BQ9UIG0 1483 aaKnown RBP23.76■■□□□ 1.39
SEM1-201ENST00000248566 PEG3Q9GZU2 1588 aa23.68■■□□□ 1.38
SEM1-201ENST00000248566 ADRA2BP18089 450 aa23.65■■□□□ 1.38
SEM1-201ENST00000248566 WIZO95785 1651 aa23.56■■□□□ 1.36
SEM1-201ENST00000248566 ERCC6Q03468 1493 aa23.52■■□□□ 1.36
SEM1-201ENST00000248566 NESP48681 1621 aa23.5■■□□□ 1.35
SEM1-201ENST00000248566 RSF1Q96T23 1441 aaPredicted RBP23.43■■□□□ 1.34
SEM1-201ENST00000248566 LAMC3Q9Y6N6 1575 aa23.34■■□□□ 1.33
SEM1-201ENST00000248566 TOP2AP11388 1531 aaKnown RBP23.25■■□□□ 1.31
SEM1-201ENST00000248566 CUX2O14529 1486 aa23.25■■□□□ 1.31
SEM1-201ENST00000248566 CADPSQ9ULU8 1353 aa23.24■■□□□ 1.31
SEM1-201ENST00000248566 PDS5BQ9NTI5 1447 aa23.22■■□□□ 1.31
SEM1-201ENST00000248566 KIF21AQ7Z4S6 1674 aa23.2■■□□□ 1.3
SEM1-201ENST00000248566 THOC2Q8NI27 1593 aaKnown RBP23.12■■□□□ 1.29
SEM1-201ENST00000248566 CFTRP13569 1480 aa23.02■■□□□ 1.28
SEM1-201ENST00000248566 CCDC88BA6NC98 1476 aa23.01■■□□□ 1.27
SEM1-201ENST00000248566 FANCD2Q9BXW9 1451 aa23■■□□□ 1.27
SEM1-201ENST00000248566 CEP164Q9UPV0 1460 aa23■■□□□ 1.27
SEM1-201ENST00000248566 MRC2Q9UBG0 1479 aa22.99■■□□□ 1.27
SEM1-201ENST00000248566 WDR62O43379 1518 aa22.89■■□□□ 1.25
SEM1-201ENST00000248566 PRDM2Q13029 1718 aa22.85■■□□□ 1.25
SEM1-201ENST00000248566 SUPT5HO00267 1087 aaKnown RBP22.84■■□□□ 1.25
SEM1-201ENST00000248566 DNAJC5Q9H3Z4 198 aa22.83■■□□□ 1.25
SEM1-201ENST00000248566 URB2Q14146 1524 aaKnown RBP22.77■■□□□ 1.24
SEM1-201ENST00000248566 TOPBP1Q92547 1522 aa22.59■■□□□ 1.21
SEM1-201ENST00000248566 ABCC8Q09428 1581 aa22.55■■□□□ 1.2
SEM1-201ENST00000248566 DNMBPQ6XZF7 1577 aa22.54■■□□□ 1.2
SEM1-201ENST00000248566 IFT140Q96RY7 1462 aa22.49■■□□□ 1.19
SEM1-201ENST00000248566 ZNF608Q9ULD9 1512 aaPredicted RBP22.45■■□□□ 1.18
SEM1-201ENST00000248566 POLA1P09884 1462 aaPredicted RBP22.38■■□□□ 1.17
SEM1-201ENST00000248566 CUX1P39880 1505 aa22.34■■□□□ 1.17
SEM1-201ENST00000248566 EIF4G3O43432 1585 aaKnown RBP22.34■■□□□ 1.17
SEM1-201ENST00000248566 RAD54L2Q9Y4B4 1467 aa22.33■■□□□ 1.17
SEM1-201ENST00000248566 TARBP1Q13395 1621 aaKnown RBP22.33■■□□□ 1.17
SEM1-201ENST00000248566 SOGA1O94964 1423 aa22.33■■□□□ 1.16
SEM1-201ENST00000248566 OSCARQ8IYS5 282 aa22.32■■□□□ 1.16
SEM1-201ENST00000248566 FGD5Q6ZNL6 1462 aa22.32■■□□□ 1.16
SEM1-201ENST00000248566 AQRO60306 1485 aaKnown RBP eCLIP22.31■■□□□ 1.16
SEM1-201ENST00000248566 TDRD9Q8NDG6 1382 aaKnown RBP22.24■■□□□ 1.15
SEM1-201ENST00000248566 FBLN2P98095 1184 aa22.21■■□□□ 1.15
SEM1-201ENST00000248566 TRIM41Q8WV44 630 aa22.15■■□□□ 1.14
SEM1-201ENST00000248566 WRNQ14191 1432 aaPredicted RBP eCLIP22.13■■□□□ 1.13
SEM1-201ENST00000248566 CHD1O14646 1710 aa22.13■■□□□ 1.13
SEM1-201ENST00000248566 WDR97A6NE52 1622 aa22.1■■□□□ 1.13
SEM1-201ENST00000248566 SNAPC4Q5SXM2 1469 aa22.09■■□□□ 1.13
SEM1-201ENST00000248566 SYNJ1O43426 1573 aa22.08■■□□□ 1.12
SEM1-201ENST00000248566 TOP2BQ02880 1626 aa22.07■■□□□ 1.12
SEM1-201ENST00000248566 BIVM-ERCC5R4GMW8 1640 aa22.06■■□□□ 1.12
SEM1-201ENST00000248566 GRIN2BQ13224 1484 aa22.06■■□□□ 1.12
SEM1-201ENST00000248566 GAPVD1Q14C86 1478 aa22.05■■□□□ 1.12
SEM1-201ENST00000248566 ABCA10Q8WWZ4 1543 aa22.04■■□□□ 1.12
SEM1-201ENST00000248566 CHMP7Q8WUX9 453 aaPredicted RBP22.04■■□□□ 1.12
SEM1-201ENST00000248566 PBRM1Q86U86 1689 aa22.03■■□□□ 1.12
SEM1-201ENST00000248566 MAGI1Q96QZ7 1491 aaPredicted RBP22■■□□□ 1.11
SEM1-201ENST00000248566 ABCA5Q8WWZ7 1642 aa21.98■■□□□ 1.11
SEM1-201ENST00000248566 RIMBP3CA6NJZ7 1639 aa21.97■■□□□ 1.11
SEM1-201ENST00000248566 RIMBP3BA6NNM3 1639 aa21.97■■□□□ 1.11
SEM1-201ENST00000248566 RIMBP3Q9UFD9 1639 aa21.97■■□□□ 1.11
SEM1-201ENST00000248566 SYNJ2O15056 1496 aa21.93■■□□□ 1.1
SEM1-201ENST00000248566 ARHGEF11O15085 1522 aa21.92■■□□□ 1.1
SEM1-201ENST00000248566 MAPK8IP2Q13387 824 aaPredicted RBP21.83■■□□□ 1.09
SEM1-201ENST00000248566 CYB5RLQ6IPT4 315 aa21.82■■□□□ 1.08
SEM1-201ENST00000248566 CLASP1Q7Z460 1538 aa21.81■■□□□ 1.08
SEM1-201ENST00000248566 ADAMTS12P58397 1594 aa21.8■■□□□ 1.08
SEM1-201ENST00000248566 ERICH3Q5RHP9 1530 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms