RNA–Protein interactions for RNA: ENST00000248420.9

CACTIN-202, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CACTIN, Length 2,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-202ENST00000248420 SETD5Q9C0A6 1442 aa28.68■■■□□ 2.18
CACTIN-202ENST00000248420 WDR97A6NE52 1622 aa28.67■■■□□ 2.18
CACTIN-202ENST00000248420 IGF1RP08069 1367 aa28.67■■■□□ 2.18
CACTIN-202ENST00000248420 TRIM52Q96A61 297 aa28.65■■■□□ 2.18
CACTIN-202ENST00000248420 NCAPD3P42695 1498 aa28.61■■■□□ 2.17
CACTIN-202ENST00000248420 CFTRP13569 1480 aa28.6■■■□□ 2.17
CACTIN-202ENST00000248420 TIAM1Q13009 1591 aa28.59■■■□□ 2.17
CACTIN-202ENST00000248420 CARMIL1Q5VZK9 1371 aa28.57■■■□□ 2.16
CACTIN-202ENST00000248420 LRRC9Q6ZRR7 1453 aa28.56■■■□□ 2.16
CACTIN-202ENST00000248420 PPP1R15AO75807 674 aaPredicted RBP28.56■■■□□ 2.16
CACTIN-202ENST00000248420 ANP32EQ9BTT0 268 aa28.53■■■□□ 2.16
CACTIN-202ENST00000248420 HMGXB3Q12766 1538 aa28.51■■■□□ 2.15
CACTIN-202ENST00000248420 ANP32CO43423 234 aa28.43■■■□□ 2.14
CACTIN-202ENST00000248420 NEFLP07196 543 aa28.41■■■□□ 2.14
CACTIN-202ENST00000248420 FHOD3Q2V2M9 1422 aa28.4■■■□□ 2.14
CACTIN-202ENST00000248420 FGD5Q6ZNL6 1462 aa28.39■■■□□ 2.13
CACTIN-202ENST00000248420 MAP3K1Q13233 1512 aa28.36■■■□□ 2.13
CACTIN-202ENST00000248420 PCF11O94913 1555 aaKnown RBP28.35■■■□□ 2.13
CACTIN-202ENST00000248420 RBM19Q9Y4C8 960 aaKnown RBP28.33■■■□□ 2.13
CACTIN-202ENST00000248420 FHAD1B1AJZ9 1412 aa28.33■■■□□ 2.13
CACTIN-202ENST00000248420 TONSLQ96HA7 1378 aa28.28■■■□□ 2.12
CACTIN-202ENST00000248420 CCER2I3L3R5 266 aa28.27■■■□□ 2.12
CACTIN-202ENST00000248420 CADPSQ9ULU8 1353 aa28.27■■■□□ 2.12
CACTIN-202ENST00000248420 IRX6P78412 446 aaPredicted RBP28.26■■■□□ 2.12
CACTIN-202ENST00000248420 TIMELESSQ9UNS1 1208 aa28.26■■■□□ 2.12
CACTIN-202ENST00000248420 RAD54L2Q9Y4B4 1467 aa28.21■■■□□ 2.11
CACTIN-202ENST00000248420 CFAP43Q8NDM7 1665 aa28.18■■■□□ 2.1
CACTIN-202ENST00000248420 HNRNPUQ00839 825 aaKnown RBP eCLIP28.16■■■□□ 2.1
CACTIN-202ENST00000248420 PTPRKQ15262 1439 aa28.16■■■□□ 2.1
CACTIN-202ENST00000248420 CCDC18Q5T9S5 1454 aa28.12■■■□□ 2.09
CACTIN-202ENST00000248420 FGD6Q6ZV73 1430 aa28.12■■■□□ 2.09
CACTIN-202ENST00000248420 MTUS2Q5JR59 1369 aa28.1■■■□□ 2.09
CACTIN-202ENST00000248420 CASKIN1Q8WXD9 1431 aa28.09■■■□□ 2.09
CACTIN-202ENST00000248420 CHIC2Q9UKJ5 165 aa28.08■■■□□ 2.09
CACTIN-202ENST00000248420 FYCO1Q9BQS8 1478 aa28.08■■■□□ 2.09
CACTIN-202ENST00000248420 RRP7BPQ9NSQ0 103 aa28.05■■■□□ 2.08
CACTIN-202ENST00000248420 PRDM2Q13029 1718 aa28.05■■■□□ 2.08
CACTIN-202ENST00000248420 AQRO60306 1485 aaKnown RBP eCLIP28.05■■■□□ 2.081e-6■■■■□ 26.1
CACTIN-202ENST00000248420 MSH5O43196 834 aa28.04■■■□□ 2.08
CACTIN-202ENST00000248420 FANCD2Q9BXW9 1451 aa28.03■■■□□ 2.08
CACTIN-202ENST00000248420 UACAQ9BZF9 1416 aa28.01■■■□□ 2.07
CACTIN-202ENST00000248420 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28■■■□□ 2.07
CACTIN-202ENST00000248420 CCDC184Q52MB2 194 aa27.99■■■□□ 2.07
CACTIN-202ENST00000248420 HSPA5P11021 654 aaKnown RBP27.98■■■□□ 2.07
CACTIN-202ENST00000248420 BCL11AQ9H165 835 aa27.98■■■□□ 2.07
CACTIN-202ENST00000248420 WASHC2AQ641Q2 1341 aa27.98■■■□□ 2.07
CACTIN-202ENST00000248420 HFM1A2PYH4 1435 aa27.98■■■□□ 2.07
CACTIN-202ENST00000248420 NAIPQ13075 1403 aa27.97■■■□□ 2.07
CACTIN-202ENST00000248420 POLA1P09884 1462 aaPredicted RBP27.95■■■□□ 2.06
CACTIN-202ENST00000248420 PTPN23Q9H3S7 1636 aa27.93■■■□□ 2.06
CACTIN-202ENST00000248420 FOXD1Q16676 465 aa27.93■■■□□ 2.06
CACTIN-202ENST00000248420 ARID3CA6NKF2 412 aa27.93■■■□□ 2.06
CACTIN-202ENST00000248420 FMN1Q68DA7 1419 aa27.92■■■□□ 2.06
CACTIN-202ENST00000248420 EFCAB5A4FU69 1503 aa27.91■■■□□ 2.06
CACTIN-202ENST00000248420 SNAPC4Q5SXM2 1469 aa27.91■■■□□ 2.06
CACTIN-202ENST00000248420 NCOA2Q15596 1464 aa27.89■■■□□ 2.06
CACTIN-202ENST00000248420 NESP48681 1621 aa27.89■■■□□ 2.06
CACTIN-202ENST00000248420 TDRD9Q8NDG6 1382 aaKnown RBP27.88■■■□□ 2.05
CACTIN-202ENST00000248420 ABCA10Q8WWZ4 1543 aa27.88■■■□□ 2.05
CACTIN-202ENST00000248420 FAM9BQ8IZU0 186 aa27.87■■■□□ 2.05
CACTIN-202ENST00000248420 CDK11AQ9UQ88 783 aaPredicted RBP27.86■■■□□ 2.05
CACTIN-202ENST00000248420 TOPBP1Q92547 1522 aa27.86■■■□□ 2.05
CACTIN-202ENST00000248420 KDM5BQ9UGL1 1544 aa27.86■■■□□ 2.05
CACTIN-202ENST00000248420 C11orf95C9JLR9 678 aaPredicted RBP27.85■■■□□ 2.05
CACTIN-202ENST00000248420 MYOM3Q5VTT5 1437 aa27.85■■■□□ 2.05
CACTIN-202ENST00000248420 CNGB1Q14028 1251 aaPredicted RBP27.85■■■□□ 2.05
CACTIN-202ENST00000248420 EIF4G2P78344 907 aaKnown RBP eCLIP27.81■■■□□ 2.04
CACTIN-202ENST00000248420 DNMBPQ6XZF7 1577 aa27.8■■■□□ 2.04
CACTIN-202ENST00000248420 L3MBTL2Q969R5 705 aa27.79■■■□□ 2.04
CACTIN-202ENST00000248420 LRRIQ1Q96JM4 1722 aa27.78■■■□□ 2.04
CACTIN-202ENST00000248420 CTTNBP2Q8WZ74 1663 aa27.78■■■□□ 2.04
CACTIN-202ENST00000248420 B4GALNT3Q6L9W6 998 aa27.75■■■□□ 2.03
CACTIN-202ENST00000248420 CC2D2AQ9P2K1 1620 aa27.74■■■□□ 2.03
CACTIN-202ENST00000248420 DENND4BO75064 1496 aaPredicted RBP27.74■■■□□ 2.03
CACTIN-202ENST00000248420 MPHOSPH9Q99550 1183 aa27.73■■■□□ 2.03
CACTIN-202ENST00000248420 SENP3-EIF4A1A0A087X0R7 540 aa27.73■■■□□ 2.03
CACTIN-202ENST00000248420 MRS2Q9HD23 443 aa27.73■■■□□ 2.03
CACTIN-202ENST00000248420 CUL7Q14999 1698 aa27.7■■■□□ 2.03
CACTIN-202ENST00000248420 GRIN2BQ13224 1484 aa27.7■■■□□ 2.03
CACTIN-202ENST00000248420 ERICH6Q7L0X2 663 aa27.7■■■□□ 2.03
CACTIN-202ENST00000248420 PRKRIP1Q9H875 184 aaPredicted RBP27.7■■■□□ 2.02
CACTIN-202ENST00000248420 MAGI3Q5TCQ9 1506 aa27.69■■■□□ 2.02
CACTIN-202ENST00000248420 KDM6BO15054 1643 aa27.69■■■□□ 2.02
CACTIN-202ENST00000248420 FANCIQ9NVI1 1328 aa27.67■■■□□ 2.02
CACTIN-202ENST00000248420 PPP4R2Q9NY27 417 aa27.66■■■□□ 2.02
CACTIN-202ENST00000248420 NBPF8Q3BBV2 869 aa27.66■■■□□ 2.02
CACTIN-202ENST00000248420 SUPT6HQ7KZ85 1726 aaKnown RBP27.65■■■□□ 2.02
CACTIN-202ENST00000248420 CNTLNQ9NXG0 1405 aa27.64■■■□□ 2.02
CACTIN-202ENST00000248420 SAMD9Q5K651 1589 aa27.61■■■□□ 2.01
CACTIN-202ENST00000248420 POLR3GLQ9BT43 218 aa27.61■■■□□ 2.01
CACTIN-202ENST00000248420 CCDC7Q96M83 1385 aa27.61■■■□□ 2.01
CACTIN-202ENST00000248420 URB2Q14146 1524 aaKnown RBP27.6■■■□□ 2.01
CACTIN-202ENST00000248420 UGGT2Q9NYU1 1516 aa27.6■■■□□ 2.01
CACTIN-202ENST00000248420 EHBP1L1Q8N3D4 1523 aa27.59■■■□□ 2.01
CACTIN-202ENST00000248420 GAPVD1Q14C86 1478 aa27.59■■■□□ 2.01
CACTIN-202ENST00000248420 KIF7Q2M1P5 1343 aa27.53■■■□□ 2
CACTIN-202ENST00000248420 NCOA1Q15788 1441 aa27.53■■■□□ 2
CACTIN-202ENST00000248420 ZNF644Q9H582 1327 aaPredicted RBP27.52■■■□□ 2
CACTIN-202ENST00000248420 CDK13Q14004 1512 aaKnown RBP27.51■■□□□ 1.99
CACTIN-202ENST00000248420 DNAJC5BQ9UF47 199 aa27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms