RNA–Protein interactions for RNA: ENST00000245923.8

RTN2-201, Transcript of reticulon 2, humanhuman

TSL 1 (best) BASIC

Gene RTN2, Length 2,293 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN2-201ENST00000245923 EFCAB5A4FU69 1503 aa39.05■■■■□ 3.84
RTN2-201ENST00000245923 CFAP43Q8NDM7 1665 aa39.04■■■■□ 3.84
RTN2-201ENST00000245923 PDS5BQ9NTI5 1447 aa39.03■■■■□ 3.84
RTN2-201ENST00000245923 LRRC9Q6ZRR7 1453 aa39.02■■■■□ 3.84
RTN2-201ENST00000245923 PCF11O94913 1555 aaKnown RBP39■■■■□ 3.83
RTN2-201ENST00000245923 ABCA5Q8WWZ7 1642 aa39■■■■□ 3.83
RTN2-201ENST00000245923 KIF21AQ7Z4S6 1674 aa38.91■■■■□ 3.82
RTN2-201ENST00000245923 AQRO60306 1485 aaKnown RBP eCLIP38.89■■■■□ 3.82
RTN2-201ENST00000245923 FYCO1Q9BQS8 1478 aa38.89■■■■□ 3.82
RTN2-201ENST00000245923 FHOD3Q2V2M9 1422 aa38.88■■■■□ 3.81
RTN2-201ENST00000245923 GAPVD1Q14C86 1478 aa38.84■■■■□ 3.81
RTN2-201ENST00000245923 P3H3Q8IVL6 736 aa38.83■■■■□ 3.81
RTN2-201ENST00000245923 DNAJC5BQ9UF47 199 aa38.83■■■■□ 3.81
RTN2-201ENST00000245923 CASKIN1Q8WXD9 1431 aa38.83■■■■□ 3.81
RTN2-201ENST00000245923 TDRD9Q8NDG6 1382 aaKnown RBP38.8■■■■□ 3.8
RTN2-201ENST00000245923 SCAF1Q9H7N4 1312 aaKnown RBP38.8■■■■□ 3.8
RTN2-201ENST00000245923 PHLDB1Q86UU1 1377 aa38.79■■■■□ 3.8
RTN2-201ENST00000245923 TARBP1Q13395 1621 aaKnown RBP38.74■■■■□ 3.79
RTN2-201ENST00000245923 SAMD9Q5K651 1589 aa38.72■■■■□ 3.79
RTN2-201ENST00000245923 FMN1Q68DA7 1419 aa38.72■■■■□ 3.79
RTN2-201ENST00000245923 ACIN1Q9UKV3 1341 aaKnown RBP38.7■■■■□ 3.79
RTN2-201ENST00000245923 ITGAEP38570 1179 aa38.68■■■■□ 3.78
RTN2-201ENST00000245923 RAB3GAP2Q9H2M9 1393 aa38.65■■■■□ 3.78
RTN2-201ENST00000245923 SNAPC4Q5SXM2 1469 aa38.65■■■■□ 3.78
RTN2-201ENST00000245923 ATP1B4Q9UN42 357 aaPredicted RBP38.61■■■■□ 3.77
RTN2-201ENST00000245923 CENPBP07199 599 aaPredicted RBP38.59■■■■□ 3.77
RTN2-201ENST00000245923 NEUROD1Q13562 356 aa38.59■■■■□ 3.77
RTN2-201ENST00000245923 SETD5Q9C0A6 1442 aa38.59■■■■□ 3.77
RTN2-201ENST00000245923 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.56■■■■□ 3.76
RTN2-201ENST00000245923 PBRM1Q86U86 1689 aa38.54■■■■□ 3.76
RTN2-201ENST00000245923 MAPKBP1O60336 1514 aa38.51■■■■□ 3.75
RTN2-201ENST00000245923 FAM50AQ14320 339 aaKnown RBP38.49■■■■□ 3.75
RTN2-201ENST00000245923 LRRIQ1Q96JM4 1722 aa38.49■■■■□ 3.75
RTN2-201ENST00000245923 THOC2Q8NI27 1593 aaKnown RBP38.48■■■■□ 3.75
RTN2-201ENST00000245923 MRC2Q9UBG0 1479 aa38.47■■■■□ 3.75
RTN2-201ENST00000245923 GRIN2BQ13224 1484 aa38.46■■■■□ 3.75
RTN2-201ENST00000245923 MIER1Q8N108 512 aa38.45■■■■□ 3.75
RTN2-201ENST00000245923 ADAMTS12P58397 1594 aa38.38■■■■□ 3.73
RTN2-201ENST00000245923 FGD6Q6ZV73 1430 aa38.38■■■■□ 3.73
RTN2-201ENST00000245923 MTUS2Q5JR59 1369 aa38.35■■■■□ 3.73
RTN2-201ENST00000245923 IQGAP2Q13576 1575 aa38.29■■■■□ 3.72
RTN2-201ENST00000245923 EHBP1L1Q8N3D4 1523 aa38.27■■■■□ 3.72
RTN2-201ENST00000245923 SUPT6HQ7KZ85 1726 aaKnown RBP38.26■■■■□ 3.72
RTN2-201ENST00000245923 NCOA2Q15596 1464 aa38.23■■■■□ 3.71
RTN2-201ENST00000245923 WDR62O43379 1518 aa38.21■■■■□ 3.71
RTN2-201ENST00000245923 CCDC18Q5T9S5 1454 aa38.21■■■■□ 3.71
RTN2-201ENST00000245923 IFT140Q96RY7 1462 aa38.21■■■■□ 3.71
RTN2-201ENST00000245923 MYOM3Q5VTT5 1437 aa38.19■■■■□ 3.7
RTN2-201ENST00000245923 HECW1Q76N89 1606 aa38.16■■■■□ 3.7
RTN2-201ENST00000245923 ARHGEF11O15085 1522 aa38.16■■■■□ 3.7
RTN2-201ENST00000245923 UGGT2Q9NYU1 1516 aa38.14■■■■□ 3.7
RTN2-201ENST00000245923 GTF3C3Q9Y5Q9 886 aa38.13■■■■□ 3.69
RTN2-201ENST00000245923 MAGI3Q5TCQ9 1506 aa38.11■■■■□ 3.69
RTN2-201ENST00000245923 YTHDC1Q96MU7 727 aaKnown RBP38.09■■■■□ 3.69
RTN2-201ENST00000245923 ZNF608Q9ULD9 1512 aaPredicted RBP38.08■■■■□ 3.69
RTN2-201ENST00000245923 HFM1A2PYH4 1435 aa38.08■■■■□ 3.69
RTN2-201ENST00000245923 PTPRKQ15262 1439 aa38.08■■■■□ 3.69
RTN2-201ENST00000245923 TIMELESSQ9UNS1 1208 aa38.07■■■■□ 3.69
RTN2-201ENST00000245923 PTPN23Q9H3S7 1636 aa38.05■■■■□ 3.68
RTN2-201ENST00000245923 EPRSP07814 1512 aaKnown RBP38.02■■■■□ 3.68
RTN2-201ENST00000245923 SIN3AQ96ST3 1273 aa38.01■■■■□ 3.68
RTN2-201ENST00000245923 TCOF1Q13428 1488 aaKnown RBP37.96■■■■□ 3.67
RTN2-201ENST00000245923 KIAA0586Q9BVV6 1533 aa37.95■■■■□ 3.67
RTN2-201ENST00000245923 NAIPQ13075 1403 aa37.94■■■■□ 3.66
RTN2-201ENST00000245923 UACAQ9BZF9 1416 aa37.94■■■■□ 3.66
RTN2-201ENST00000245923 EIF4G3O43432 1585 aaKnown RBP37.93■■■■□ 3.66
RTN2-201ENST00000245923 CDK13Q14004 1512 aaKnown RBP37.88■■■■□ 3.66
RTN2-201ENST00000245923 KIAA0556O60303 1618 aa37.88■■■■□ 3.65
RTN2-201ENST00000245923 GRIN2AQ12879 1464 aa37.86■■■■□ 3.65
RTN2-201ENST00000245923 DISP1Q96F81 1524 aa37.86■■■■□ 3.65
RTN2-201ENST00000245923 MIA2Q96PC5 1412 aa37.82■■■■□ 3.64
RTN2-201ENST00000245923 GCC2Q8IWJ2 1684 aa37.81■■■■□ 3.64
RTN2-201ENST00000245923 PPP1R15AO75807 674 aaPredicted RBP37.78■■■■□ 3.64
RTN2-201ENST00000245923 ERCC6Q03468 1493 aa37.77■■■■□ 3.64
RTN2-201ENST00000245923 AKNAQ7Z591 1439 aa37.76■■■■□ 3.64
RTN2-201ENST00000245923 MAGI1Q96QZ7 1491 aaPredicted RBP37.75■■■■□ 3.63
RTN2-201ENST00000245923 RAPGEF6Q8TEU7 1601 aa37.71■■■■□ 3.63
RTN2-201ENST00000245923 NUP153P49790 1475 aaKnown RBP37.68■■■■□ 3.62
RTN2-201ENST00000245923 PELP1Q8IZL8 1130 aaKnown RBP37.67■■■■□ 3.62
RTN2-201ENST00000245923 TONSLQ96HA7 1378 aa37.66■■■■□ 3.62
RTN2-201ENST00000245923 SYNJ2O15056 1496 aa37.64■■■■□ 3.62
RTN2-201ENST00000245923 CEP170Q5SW79 1584 aa37.62■■■■□ 3.61
RTN2-201ENST00000245923 RRP7BPQ9NSQ0 103 aa37.59■■■■□ 3.61
RTN2-201ENST00000245923 ARID3CA6NKF2 412 aa37.57■■■■□ 3.61
RTN2-201ENST00000245923 CHIC2Q9UKJ5 165 aa37.56■■■■□ 3.6
RTN2-201ENST00000245923 KDM6BO15054 1643 aa37.55■■■■□ 3.6
RTN2-201ENST00000245923 CHMP7Q8WUX9 453 aaPredicted RBP37.52■■■■□ 3.6
RTN2-201ENST00000245923 DENND4BO75064 1496 aaPredicted RBP37.51■■■■□ 3.59
RTN2-201ENST00000245923 DNMT1P26358 1616 aaKnown RBP37.5■■■■□ 3.59
RTN2-201ENST00000245923 KDM5BQ9UGL1 1544 aa37.5■■■■□ 3.59
RTN2-201ENST00000245923 CDK11AQ9UQ88 783 aaPredicted RBP37.49■■■■□ 3.59
RTN2-201ENST00000245923 NUP160Q12769 1436 aa37.48■■■■□ 3.59
RTN2-201ENST00000245923 ROCK1Q13464 1354 aa37.47■■■■□ 3.59
RTN2-201ENST00000245923 DAPK1P53355 1430 aa37.47■■■■□ 3.59
RTN2-201ENST00000245923 DDX10Q13206 875 aaKnown RBP37.46■■■■□ 3.59
RTN2-201ENST00000245923 TROQ12816 1431 aaPredicted RBP37.42■■■■□ 3.58
RTN2-201ENST00000245923 ABCC5O15440 1437 aa37.41■■■■□ 3.58
RTN2-201ENST00000245923 CARMIL2Q6F5E8 1435 aa37.39■■■■□ 3.58
RTN2-201ENST00000245923 ADCY10Q96PN6 1610 aa37.38■■■■□ 3.57
RTN2-201ENST00000245923 PLB1Q6P1J6 1458 aa37.38■■■■□ 3.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms