RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 CLASP1Q7Z460 1538 aa32.9■■■□□ 2.86
SNRPA-201ENST00000243563 UBTFP17480 764 aaKnown RBP32.88■■■□□ 2.85
SNRPA-201ENST00000243563 KIAA0586Q9BVV6 1533 aa32.84■■■□□ 2.85
SNRPA-201ENST00000243563 IQGAP2Q13576 1575 aa32.83■■■□□ 2.85
SNRPA-201ENST00000243563 OSCARQ8IYS5 282 aa32.8■■■□□ 2.84
SNRPA-201ENST00000243563 TNIKQ9UKE5 1360 aa32.78■■■□□ 2.84
SNRPA-201ENST00000243563 SHROOM2Q13796 1616 aa32.74■■■□□ 2.83
SNRPA-201ENST00000243563 RANGAP1P46060 587 aaPredicted RBP32.67■■■□□ 2.82
SNRPA-201ENST00000243563 UGGT2Q9NYU1 1516 aa32.66■■■□□ 2.82
SNRPA-201ENST00000243563 ERCC6L2Q5T890 1561 aa32.63■■■□□ 2.81
SNRPA-201ENST00000243563 JPH4Q96JJ6 628 aa32.62■■■□□ 2.81
SNRPA-201ENST00000243563 SAMD9Q5K651 1589 aa32.6■■■□□ 2.81
SNRPA-201ENST00000243563 CEP162Q5TB80 1403 aa32.59■■■□□ 2.81
SNRPA-201ENST00000243563 DISP1Q96F81 1524 aa32.58■■■□□ 2.81
SNRPA-201ENST00000243563 PRG4Q92954 1404 aaPredicted RBP32.55■■■□□ 2.8
SNRPA-201ENST00000243563 KIAA0556O60303 1618 aa32.55■■■□□ 2.8
SNRPA-201ENST00000243563 ARHGAP35Q9NRY4 1499 aa32.53■■■□□ 2.8
SNRPA-201ENST00000243563 CLIP1P30622 1438 aa32.51■■■□□ 2.79
SNRPA-201ENST00000243563 EFCAB5A4FU69 1503 aa32.48■■■□□ 2.79
SNRPA-201ENST00000243563 P3H3Q8IVL6 736 aa32.46■■■□□ 2.79
SNRPA-201ENST00000243563 FHOD3Q2V2M9 1422 aa32.43■■■□□ 2.78
SNRPA-201ENST00000243563 ARHGEF11O15085 1522 aa32.43■■■□□ 2.78
SNRPA-201ENST00000243563 ARAP1Q96P48 1450 aa32.41■■■□□ 2.78
SNRPA-201ENST00000243563 RIMBP3CA6NJZ7 1639 aa32.4■■■□□ 2.78
SNRPA-201ENST00000243563 RIMBP3BA6NNM3 1639 aa32.4■■■□□ 2.78
SNRPA-201ENST00000243563 RIMBP3Q9UFD9 1639 aa32.4■■■□□ 2.78
SNRPA-201ENST00000243563 CARMIL2Q6F5E8 1435 aa32.38■■■□□ 2.77
SNRPA-201ENST00000243563 TTBK1Q5TCY1 1321 aaPredicted RBP32.29■■■□□ 2.76
SNRPA-201ENST00000243563 PTPRGP23470 1445 aa32.2■■■□□ 2.75
SNRPA-201ENST00000243563 DNAJC5Q9H3Z4 198 aa32.18■■■□□ 2.74
SNRPA-201ENST00000243563 PCF11O94913 1555 aaKnown RBP32.16■■■□□ 2.74
SNRPA-201ENST00000243563 PLB1Q6P1J6 1458 aa32.15■■■□□ 2.74
SNRPA-201ENST00000243563 ABCA8O94911 1581 aa32.14■■■□□ 2.74
SNRPA-201ENST00000243563 FMN1Q68DA7 1419 aa32.12■■■□□ 2.73
SNRPA-201ENST00000243563 RAPGEF6Q8TEU7 1601 aa32.11■■■□□ 2.73
SNRPA-201ENST00000243563 VPS8Q8N3P4 1428 aa32.1■■■□□ 2.73
SNRPA-201ENST00000243563 LRRIQ1Q96JM4 1722 aa32.1■■■□□ 2.73
SNRPA-201ENST00000243563 ADCY10Q96PN6 1610 aa32.06■■■□□ 2.72
SNRPA-201ENST00000243563 UACAQ9BZF9 1416 aa32.03■■■□□ 2.72
SNRPA-201ENST00000243563 CYB5RLQ6IPT4 315 aa32.02■■■□□ 2.72
SNRPA-201ENST00000243563 CASKIN1Q8WXD9 1431 aa32.02■■■□□ 2.72
SNRPA-201ENST00000243563 ABCC2Q92887 1545 aa32.01■■■□□ 2.71
SNRPA-201ENST00000243563 NUP153P49790 1475 aaKnown RBP32■■■□□ 2.71
SNRPA-201ENST00000243563 FYCO1Q9BQS8 1478 aa31.99■■■□□ 2.71
SNRPA-201ENST00000243563 HECW1Q76N89 1606 aa31.98■■■□□ 2.71
SNRPA-201ENST00000243563 UHRF1BP1LA0JNW5 1464 aa31.96■■■□□ 2.71
SNRPA-201ENST00000243563 ARID3CA6NKF2 412 aa31.93■■■□□ 2.7
SNRPA-201ENST00000243563 ATP1B4Q9UN42 357 aaPredicted RBP31.91■■■□□ 2.7
SNRPA-201ENST00000243563 CDK13Q14004 1512 aaKnown RBP31.91■■■□□ 2.7
SNRPA-201ENST00000243563 ZCCHC11Q5TAX3 1644 aaKnown RBP31.88■■■□□ 2.69
SNRPA-201ENST00000243563 EPRSP07814 1512 aaKnown RBP31.87■■■□□ 2.69
SNRPA-201ENST00000243563 CFAP43Q8NDM7 1665 aa31.85■■■□□ 2.69
SNRPA-201ENST00000243563 ATP10BO94823 1461 aa31.84■■■□□ 2.69
SNRPA-201ENST00000243563 KDM5BQ9UGL1 1544 aa31.84■■■□□ 2.69
SNRPA-201ENST00000243563 TIAM1Q13009 1591 aa31.79■■■□□ 2.68
SNRPA-201ENST00000243563 CCDC18Q5T9S5 1454 aa31.77■■■□□ 2.68
SNRPA-201ENST00000243563 MAGI3Q5TCQ9 1506 aa31.75■■■□□ 2.67
SNRPA-201ENST00000243563 MAP3K1Q13233 1512 aa31.68■■■□□ 2.66
SNRPA-201ENST00000243563 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.67■■■□□ 2.66
SNRPA-201ENST00000243563 HNRNPUL2Q1KMD3 747 aaKnown RBP31.67■■■□□ 2.66
SNRPA-201ENST00000243563 KANK4Q5T7N3 995 aaPredicted RBP31.64■■■□□ 2.65
SNRPA-201ENST00000243563 ASXL2Q76L83 1435 aa31.61■■■□□ 2.65
SNRPA-201ENST00000243563 MAPKBP1O60336 1514 aa31.6■■■□□ 2.65
SNRPA-201ENST00000243563 LRRC9Q6ZRR7 1453 aa31.6■■■□□ 2.65
SNRPA-201ENST00000243563 PPARGC1BQ86YN6 1023 aaKnown RBP31.6■■■□□ 2.65
SNRPA-201ENST00000243563 NPM1P06748 294 aaKnown RBP eCLIP31.59■■■□□ 2.65
SNRPA-201ENST00000243563 APLP2Q06481 763 aa31.57■■■□□ 2.64
SNRPA-201ENST00000243563 KIF14Q15058 1648 aa31.56■■■□□ 2.64
SNRPA-201ENST00000243563 EHBP1L1Q8N3D4 1523 aa31.55■■■□□ 2.64
SNRPA-201ENST00000243563 WDR7Q9Y4E6 1490 aa31.54■■■□□ 2.64
SNRPA-201ENST00000243563 TROQ12816 1431 aaPredicted RBP31.53■■■□□ 2.64
SNRPA-201ENST00000243563 MTUS2Q5JR59 1369 aa31.51■■■□□ 2.63
SNRPA-201ENST00000243563 PLEKHD1A6NEE1 506 aa31.49■■■□□ 2.63
SNRPA-201ENST00000243563 CDK11AQ9UQ88 783 aaPredicted RBP31.46■■■□□ 2.63
SNRPA-201ENST00000243563 SUPT6HQ7KZ85 1726 aaKnown RBP31.45■■■□□ 2.63
SNRPA-201ENST00000243563 KCNH8Q96L42 1107 aa31.42■■■□□ 2.62
SNRPA-201ENST00000243563 TTC37Q6PGP7 1564 aa31.42■■■□□ 2.62
SNRPA-201ENST00000243563 DIP2BQ9P265 1576 aa31.41■■■□□ 2.62
SNRPA-201ENST00000243563 KIF13AQ9H1H9 1805 aa31.4■■■□□ 2.62
SNRPA-201ENST00000243563 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.4■■■□□ 2.622e-22■□□□□ 9.8
SNRPA-201ENST00000243563 NCOA2Q15596 1464 aa31.39■■■□□ 2.62
SNRPA-201ENST00000243563 ABCC10Q5T3U5 1492 aa31.39■■■□□ 2.62
SNRPA-201ENST00000243563 ABCA9Q8IUA7 1624 aa31.35■■■□□ 2.61
SNRPA-201ENST00000243563 CDC42BPAQ5VT25 1732 aa31.33■■■□□ 2.61
SNRPA-201ENST00000243563 GLI2P10070 1586 aa31.3■■■□□ 2.6
SNRPA-201ENST00000243563 PHLDB1Q86UU1 1377 aa31.28■■■□□ 2.6
SNRPA-201ENST00000243563 MYO5CQ9NQX4 1742 aa31.28■■■□□ 2.6
SNRPA-201ENST00000243563 MAP3K4Q9Y6R4 1608 aa31.27■■■□□ 2.6
SNRPA-201ENST00000243563 CDC42BPBQ9Y5S2 1711 aa31.26■■■□□ 2.59
SNRPA-201ENST00000243563 PREX2Q70Z35 1606 aa31.24■■■□□ 2.59
SNRPA-201ENST00000243563 GPATCH8Q9UKJ3 1502 aaKnown RBP31.23■■■□□ 2.59
SNRPA-201ENST00000243563 FAM69CQ0P6D2 419 aa31.22■■■□□ 2.59
SNRPA-201ENST00000243563 ITSN2Q9NZM3 1697 aa31.21■■■□□ 2.59
SNRPA-201ENST00000243563 TSPOAP1O95153 1857 aa31.21■■■□□ 2.59
SNRPA-201ENST00000243563 PPRC1Q5VV67 1664 aaKnown RBP31.2■■■□□ 2.59
SNRPA-201ENST00000243563 CCNB3Q8WWL7 1395 aa31.19■■■□□ 2.58
SNRPA-201ENST00000243563 MYOM3Q5VTT5 1437 aa31.16■■■□□ 2.58
SNRPA-201ENST00000243563 CD109Q6YHK3 1445 aa31.15■■■□□ 2.58
SNRPA-201ENST00000243563 PLCH2O75038 1416 aa31.13■■■□□ 2.57
SNRPA-201ENST00000243563 ARHGAP5Q13017 1502 aa31.1■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms