RNA–Protein interactions for RNA: ENST00000243103.3

HOXC12-201, Transcript of homeobox C12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC12, Length 3,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12-201ENST00000243103 BAZ1AQ9NRL2 1556 aaPredicted RBP20.83■□□□□ 0.93
HOXC12-201ENST00000243103 FAM9BQ8IZU0 186 aa20.83■□□□□ 0.93
HOXC12-201ENST00000243103 NACADO15069 1562 aa20.82■□□□□ 0.92
HOXC12-201ENST00000243103 POLR3GLQ9BT43 218 aa20.81■□□□□ 0.92
HOXC12-201ENST00000243103 DHX57Q6P158 1386 aaKnown RBP20.8■□□□□ 0.92
HOXC12-201ENST00000243103 GOLGA3Q08378 1498 aa20.8■□□□□ 0.92
HOXC12-201ENST00000243103 ZBTB47Q9UFB7 747 aaPredicted RBP20.75■□□□□ 0.91
HOXC12-201ENST00000243103 ARXQ96QS3 562 aa20.75■□□□□ 0.91
HOXC12-201ENST00000243103 FANCIQ9NVI1 1328 aa20.73■□□□□ 0.91
HOXC12-201ENST00000243103 ANP32AP39687 249 aaKnown RBP20.71■□□□□ 0.91
HOXC12-201ENST00000243103 SMARCA2P51531 1590 aa20.71■□□□□ 0.91
HOXC12-201ENST00000243103 CHIC2Q9UKJ5 165 aa20.69■□□□□ 0.9
HOXC12-201ENST00000243103 NEFMP07197 916 aa20.67■□□□□ 0.9
HOXC12-201ENST00000243103 BRPF3Q9ULD4 1205 aa20.67■□□□□ 0.9
HOXC12-201ENST00000243103 TOP2AP11388 1531 aaKnown RBP20.64■□□□□ 0.9
HOXC12-201ENST00000243103 SMARCA4P51532 1647 aa20.63■□□□□ 0.89
HOXC12-201ENST00000243103 MYT1LQ9UL68 1186 aa20.56■□□□□ 0.88
HOXC12-201ENST00000243103 SYNJ1O43426 1573 aa20.56■□□□□ 0.88
HOXC12-201ENST00000243103 VPS8Q8N3P4 1428 aa20.56■□□□□ 0.88
HOXC12-201ENST00000243103 CEP164Q9UPV0 1460 aa20.56■□□□□ 0.88
HOXC12-201ENST00000243103 PPP4R2Q9NY27 417 aa20.55■□□□□ 0.88
HOXC12-201ENST00000243103 ARID4BQ4LE39 1312 aaPredicted RBP20.54■□□□□ 0.88
HOXC12-201ENST00000243103 ZNF326Q5BKZ1 582 aaKnown RBP20.53■□□□□ 0.88
HOXC12-201ENST00000243103 SLC4A3P48751 1232 aa20.52■□□□□ 0.88
HOXC12-201ENST00000243103 FOXD1Q16676 465 aa20.5■□□□□ 0.87
HOXC12-201ENST00000243103 CCDC184Q52MB2 194 aa20.48■□□□□ 0.87
HOXC12-201ENST00000243103 RRP7BPQ9NSQ0 103 aa20.48■□□□□ 0.87
HOXC12-201ENST00000243103 PPP1R15AO75807 674 aaPredicted RBP20.45■□□□□ 0.86
HOXC12-201ENST00000243103 EEA1Q15075 1411 aa20.42■□□□□ 0.86
HOXC12-201ENST00000243103 IPO9Q96P70 1041 aaKnown RBP20.42■□□□□ 0.86
HOXC12-201ENST00000243103 MRS2Q9HD23 443 aa20.42■□□□□ 0.86
HOXC12-201ENST00000243103 SKAP1Q86WV1 359 aa20.42■□□□□ 0.86
HOXC12-201ENST00000243103 UBE2Q2Q8WVN8 375 aa20.42■□□□□ 0.86
HOXC12-201ENST00000243103 RAB3GAP2Q9H2M9 1393 aa20.4■□□□□ 0.86
HOXC12-201ENST00000243103 PKNOX2Q96KN3 472 aa20.38■□□□□ 0.85
HOXC12-201ENST00000243103 DAXXQ9UER7 740 aaPredicted RBP20.37■□□□□ 0.85
HOXC12-201ENST00000243103 ATAD2BQ9ULI0 1458 aa20.37■□□□□ 0.85
HOXC12-201ENST00000243103 ERICH6BQ5W0A0 696 aa20.37■□□□□ 0.85
HOXC12-201ENST00000243103 KIF21BO75037 1637 aa20.36■□□□□ 0.85
HOXC12-201ENST00000243103 VSIG10Q8N0Z9 540 aa20.36■□□□□ 0.85
HOXC12-201ENST00000243103 CCNB3Q8WWL7 1395 aa20.36■□□□□ 0.85
HOXC12-201ENST00000243103 ARAP1Q96P48 1450 aa20.36■□□□□ 0.85
HOXC12-201ENST00000243103 EIF4G1Q04637 1599 aaKnown RBP20.35■□□□□ 0.85
HOXC12-201ENST00000243103 CCER2I3L3R5 266 aa20.34■□□□□ 0.85
HOXC12-201ENST00000243103 DNAJC5BQ9UF47 199 aa20.32■□□□□ 0.84
HOXC12-201ENST00000243103 C11orf95C9JLR9 678 aaPredicted RBP20.32■□□□□ 0.84
HOXC12-201ENST00000243103 CUX2O14529 1486 aa20.28■□□□□ 0.84
HOXC12-201ENST00000243103 WDR97A6NE52 1622 aa20.26■□□□□ 0.83
HOXC12-201ENST00000243103 PLEKHG5O94827 1062 aa20.26■□□□□ 0.83
HOXC12-201ENST00000243103 FBLN2P98095 1184 aa20.25■□□□□ 0.83
HOXC12-201ENST00000243103 ZNF777Q9ULD5 760 aaPredicted RBP20.25■□□□□ 0.83
HOXC12-201ENST00000243103 FHOD3Q2V2M9 1422 aa20.21■□□□□ 0.83
HOXC12-201ENST00000243103 KIF27Q86VH2 1401 aa20.2■□□□□ 0.83
HOXC12-201ENST00000243103 PHLDB1Q86UU1 1377 aa20.2■□□□□ 0.82
HOXC12-201ENST00000243103 TONSLQ96HA7 1378 aa20.2■□□□□ 0.82
HOXC12-201ENST00000243103 UNC13AQ9UPW8 1703 aa20.18■□□□□ 0.82
HOXC12-201ENST00000243103 FRAT1Q92837 279 aaPredicted RBP20.18■□□□□ 0.82
HOXC12-201ENST00000243103 CARMIL1Q5VZK9 1371 aa20.16■□□□□ 0.82
HOXC12-201ENST00000243103 BICRAQ9NZM4 1560 aa20.15■□□□□ 0.82
HOXC12-201ENST00000243103 NAP1L5Q96NT1 182 aaPredicted RBP20.15■□□□□ 0.82
HOXC12-201ENST00000243103 AKNAQ7Z591 1439 aa20.14■□□□□ 0.81
HOXC12-201ENST00000243103 TDRD9Q8NDG6 1382 aaKnown RBP20.13■□□□□ 0.81
HOXC12-201ENST00000243103 A0A0U1RQG5 324 aaPredicted RBP20.12■□□□□ 0.81
HOXC12-201ENST00000243103 ARID3AQ99856 593 aa20.12■□□□□ 0.81
HOXC12-201ENST00000243103 GSE1Q14687 1217 aa20.1■□□□□ 0.81
HOXC12-201ENST00000243103 SETD5Q9C0A6 1442 aa20.09■□□□□ 0.81
HOXC12-201ENST00000243103 MTUS2Q5JR59 1369 aa20.09■□□□□ 0.81
HOXC12-201ENST00000243103 ARHGAP35Q9NRY4 1499 aa20.07■□□□□ 0.8
HOXC12-201ENST00000243103 MAPKBP1O60336 1514 aa20.06■□□□□ 0.8
HOXC12-201ENST00000243103 KDM2AQ9Y2K7 1162 aa20.06■□□□□ 0.8
HOXC12-201ENST00000243103 SENP3Q9H4L4 574 aaPredicted RBP20.06■□□□□ 0.8
HOXC12-201ENST00000243103 IGF1RP08069 1367 aa20.06■□□□□ 0.8
HOXC12-201ENST00000243103 RAD54L2Q9Y4B4 1467 aa20.06■□□□□ 0.8
HOXC12-201ENST00000243103 HSPA5P11021 654 aaKnown RBP20.05■□□□□ 0.8
HOXC12-201ENST00000243103 ZMYND15Q9H091 742 aa20.05■□□□□ 0.8
HOXC12-201ENST00000243103 EXOC6Q8TAG9 804 aa20.05■□□□□ 0.8
HOXC12-201ENST00000243103 PDE4AP27815 886 aa20.04■□□□□ 0.8
HOXC12-201ENST00000243103 RRBP1Q9P2E9 1410 aaKnown RBP20.04■□□□□ 0.8
HOXC12-201ENST00000243103 PLIN1O60240 522 aa20.04■□□□□ 0.8
HOXC12-201ENST00000243103 NFKBIBQ15653 356 aa20.04■□□□□ 0.8
HOXC12-201ENST00000243103 CUX1P39880 1505 aa20.02■□□□□ 0.8
HOXC12-201ENST00000243103 FRAT2O75474 233 aaPredicted RBP20.01■□□□□ 0.79
HOXC12-201ENST00000243103 SPRYD3Q8NCJ5 442 aa19.99■□□□□ 0.79
HOXC12-201ENST00000243103 GZF1Q9H116 711 aaPredicted RBP19.99■□□□□ 0.79
HOXC12-201ENST00000243103 PPM1GO15355 546 aaPredicted RBP19.98■□□□□ 0.79
HOXC12-201ENST00000243103 RGS3P49796 1198 aa19.98■□□□□ 0.79
HOXC12-201ENST00000243103 GLIPR1L2Q4G1C9 344 aa19.98■□□□□ 0.79
HOXC12-201ENST00000243103 PODXL2Q9NZ53 605 aa19.97■□□□□ 0.79
HOXC12-201ENST00000243103 WASHC2AQ641Q2 1341 aa19.95■□□□□ 0.78
HOXC12-201ENST00000243103 PRXQ9BXM0 1461 aa19.95■□□□□ 0.78
HOXC12-201ENST00000243103 SLKQ9H2G2 1235 aaPredicted RBP19.94■□□□□ 0.78
HOXC12-201ENST00000243103 ZNF644Q9H582 1327 aaPredicted RBP19.94■□□□□ 0.78
HOXC12-201ENST00000243103 DCAF11Q8TEB1 546 aa19.93■□□□□ 0.78
HOXC12-201ENST00000243103 NESP48681 1621 aa19.92■□□□□ 0.78
HOXC12-201ENST00000243103 TMC1Q8TDI8 760 aa19.89■□□□□ 0.78
HOXC12-201ENST00000243103 PRKRIP1Q9H875 184 aaPredicted RBP19.89■□□□□ 0.78
HOXC12-201ENST00000243103 L3MBTL2Q969R5 705 aa19.89■□□□□ 0.77
HOXC12-201ENST00000243103 EIF4G2P78344 907 aaKnown RBP eCLIP19.88■□□□□ 0.77
HOXC12-201ENST00000243103 SLC4A1APQ9BWU0 796 aaKnown RBP19.87■□□□□ 0.77
HOXC12-201ENST00000243103 FGD5Q6ZNL6 1462 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms