RNA–Protein interactions for RNA: ENST00000238633.6

NPC2-201, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene NPC2, Length 796 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-201ENST00000238633 KIF13AQ9H1H9 1805 aa17.16■□□□□ 0.34
NPC2-201ENST00000238633 WRNQ14191 1432 aaPredicted RBP eCLIP17.15■□□□□ 0.34
NPC2-201ENST00000238633 PRG4Q92954 1404 aaPredicted RBP17.15■□□□□ 0.34
NPC2-201ENST00000238633 FAM69CQ0P6D2 419 aa17.14■□□□□ 0.33
NPC2-201ENST00000238633 JPH4Q96JJ6 628 aa17.13■□□□□ 0.33
NPC2-201ENST00000238633 ABCC10Q5T3U5 1492 aa17.12■□□□□ 0.33
NPC2-201ENST00000238633 ILDR1Q86SU0 546 aaPredicted RBP17.09■□□□□ 0.33
NPC2-201ENST00000238633 ERICH3Q5RHP9 1530 aa17.05■□□□□ 0.32
NPC2-201ENST00000238633 MAPKBP1O60336 1514 aa17.02■□□□□ 0.32
NPC2-201ENST00000238633 DIP2BQ9P265 1576 aa17.02■□□□□ 0.31
NPC2-201ENST00000238633 TOP2BQ02880 1626 aa17.01■□□□□ 0.31
NPC2-201ENST00000238633 NPM1P06748 294 aaKnown RBP eCLIP17.01■□□□□ 0.31
NPC2-201ENST00000238633 ADCY10Q96PN6 1610 aa16.98■□□□□ 0.31
NPC2-201ENST00000238633 BIVM-ERCC5R4GMW8 1640 aa16.98■□□□□ 0.31
NPC2-201ENST00000238633 RUSC2Q8N2Y8 1516 aa16.95■□□□□ 0.3
NPC2-201ENST00000238633 KDM6BO15054 1643 aa16.94■□□□□ 0.3
NPC2-201ENST00000238633 PIAS4Q8N2W9 510 aaPredicted RBP16.92■□□□□ 0.3
NPC2-201ENST00000238633 SUPT5HO00267 1087 aaKnown RBP16.91■□□□□ 0.3
NPC2-201ENST00000238633 KIAA0586Q9BVV6 1533 aa16.86■□□□□ 0.29
NPC2-201ENST00000238633 IGF1RP08069 1367 aa16.84■□□□□ 0.29
NPC2-201ENST00000238633 TSPOAP1O95153 1857 aa16.83■□□□□ 0.28
NPC2-201ENST00000238633 PTPRGP23470 1445 aa16.81■□□□□ 0.28
NPC2-201ENST00000238633 ADGRL1O94910 1474 aa16.8■□□□□ 0.28
NPC2-201ENST00000238633 COL17A1Q9UMD9 1497 aaPredicted RBP16.8■□□□□ 0.28
NPC2-201ENST00000238633 ASXL2Q76L83 1435 aa16.78■□□□□ 0.28
NPC2-201ENST00000238633 TTBK1Q5TCY1 1321 aaPredicted RBP16.77■□□□□ 0.28
NPC2-201ENST00000238633 ABCC2Q92887 1545 aa16.77■□□□□ 0.28
NPC2-201ENST00000238633 PPRC1Q5VV67 1664 aaKnown RBP16.75■□□□□ 0.27
NPC2-201ENST00000238633 GLI2P10070 1586 aa16.74■□□□□ 0.27
NPC2-201ENST00000238633 TNIKQ9UKE5 1360 aa16.74■□□□□ 0.27
NPC2-201ENST00000238633 PLB1Q6P1J6 1458 aa16.73■□□□□ 0.27
NPC2-201ENST00000238633 HECW2Q9P2P5 1572 aa16.71■□□□□ 0.27
NPC2-201ENST00000238633 UHRF1BP1LA0JNW5 1464 aa16.69■□□□□ 0.26
NPC2-201ENST00000238633 KIF27Q86VH2 1401 aa16.69■□□□□ 0.26
NPC2-201ENST00000238633 EPRSP07814 1512 aaKnown RBP16.67■□□□□ 0.26
NPC2-201ENST00000238633 CARMIL2Q6F5E8 1435 aa16.67■□□□□ 0.26
NPC2-201ENST00000238633 CARMIL1Q5VZK9 1371 aa16.66■□□□□ 0.26
NPC2-201ENST00000238633 UACAQ9BZF9 1416 aa16.66■□□□□ 0.26
NPC2-201ENST00000238633 CUL7Q14999 1698 aa16.64■□□□□ 0.25
NPC2-201ENST00000238633 DISP1Q96F81 1524 aa16.63■□□□□ 0.25
NPC2-201ENST00000238633 KDM5BQ9UGL1 1544 aa16.63■□□□□ 0.25
NPC2-201ENST00000238633 MAP3K4Q9Y6R4 1608 aa16.6■□□□□ 0.25
NPC2-201ENST00000238633 TEX14Q8IWB6 1497 aa16.58■□□□□ 0.24
NPC2-201ENST00000238633 IQGAP2Q13576 1575 aa16.57■□□□□ 0.24
NPC2-201ENST00000238633 MSH5O43196 834 aa16.56■□□□□ 0.24
NPC2-201ENST00000238633 FBXO41Q8TF61 875 aa16.54■□□□□ 0.24
NPC2-201ENST00000238633 ZCCHC11Q5TAX3 1644 aaKnown RBP16.52■□□□□ 0.23
NPC2-201ENST00000238633 WDR7Q9Y4E6 1490 aa16.51■□□□□ 0.23
NPC2-201ENST00000238633 UGGT2Q9NYU1 1516 aa16.5■□□□□ 0.23
NPC2-201ENST00000238633 CD109Q6YHK3 1445 aa16.48■□□□□ 0.23
NPC2-201ENST00000238633 MAGI3Q5TCQ9 1506 aa16.48■□□□□ 0.23
NPC2-201ENST00000238633 KCNH8Q96L42 1107 aa16.46■□□□□ 0.23
NPC2-201ENST00000238633 KIAA0556O60303 1618 aa16.44■□□□□ 0.22
NPC2-201ENST00000238633 RAPGEF2Q9Y4G8 1499 aa16.42■□□□□ 0.22
NPC2-201ENST00000238633 KIF21BO75037 1637 aa16.37■□□□□ 0.21
NPC2-201ENST00000238633 PTPRMP28827 1452 aa16.37■□□□□ 0.21
NPC2-201ENST00000238633 ARAP3Q8WWN8 1544 aa16.37■□□□□ 0.21
NPC2-201ENST00000238633 ABCA8O94911 1581 aa16.36■□□□□ 0.21
NPC2-201ENST00000238633 CFAP43Q8NDM7 1665 aa16.36■□□□□ 0.21
NPC2-201ENST00000238633 RAPGEF3O95398 923 aa16.32■□□□□ 0.2
NPC2-201ENST00000238633 ADAMTSL3P82987 1691 aa16.31■□□□□ 0.2
NPC2-201ENST00000238633 ARID3CA6NKF2 412 aa16.3■□□□□ 0.2
NPC2-201ENST00000238633 GOLGA3Q08378 1498 aa16.28■□□□□ 0.2
NPC2-201ENST00000238633 LMTK3Q96Q04 1460 aa16.28■□□□□ 0.2
NPC2-201ENST00000238633 ATP10BO94823 1461 aa16.27■□□□□ 0.19
NPC2-201ENST00000238633 PHLDB1Q86UU1 1377 aa16.26■□□□□ 0.19
NPC2-201ENST00000238633 PCF11O94913 1555 aaKnown RBP16.25■□□□□ 0.19
NPC2-201ENST00000238633 HSPA2P54652 639 aa16.22■□□□□ 0.19
NPC2-201ENST00000238633 P3H3Q8IVL6 736 aa16.21■□□□□ 0.19
NPC2-201ENST00000238633 ARID4BQ4LE39 1312 aaPredicted RBP16.2■□□□□ 0.18
NPC2-201ENST00000238633 MADDQ8WXG6 1647 aa16.2■□□□□ 0.18
NPC2-201ENST00000238633 FRMPD1Q5SYB0 1578 aa16.2■□□□□ 0.18
NPC2-201ENST00000238633 ABCA9Q8IUA7 1624 aa16.19■□□□□ 0.18
NPC2-201ENST00000238633 BCORL1Q5H9F3 1711 aa16.19■□□□□ 0.18
NPC2-201ENST00000238633 NEO1Q92859 1461 aa16.19■□□□□ 0.18
NPC2-201ENST00000238633 PRXQ9BXM0 1461 aa16.18■□□□□ 0.18
NPC2-201ENST00000238633 CERKQ8TCT0 537 aa16.17■□□□□ 0.18
NPC2-201ENST00000238633 CTTNBP2Q8WZ74 1663 aa16.17■□□□□ 0.18
NPC2-201ENST00000238633 ILDR2Q71H61 639 aa16.15■□□□□ 0.18
NPC2-201ENST00000238633 FHOD3Q2V2M9 1422 aa16.1■□□□□ 0.17
NPC2-201ENST00000238633 ARHGEF40Q8TER5 1519 aa16.09■□□□□ 0.17
NPC2-201ENST00000238633 RIMS1Q86UR5 1692 aaKnown RBP16.09■□□□□ 0.17
NPC2-201ENST00000238633 DENND4BO75064 1496 aaPredicted RBP16.08■□□□□ 0.16
NPC2-201ENST00000238633 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.07■□□□□ 0.16
NPC2-201ENST00000238633 HNRNPUL2Q1KMD3 747 aaKnown RBP16.07■□□□□ 0.16
NPC2-201ENST00000238633 AKNAQ7Z591 1439 aa16.07■□□□□ 0.16
NPC2-201ENST00000238633 YEATS2Q9ULM3 1422 aa16.07■□□□□ 0.16
NPC2-201ENST00000238633 NUP153P49790 1475 aaKnown RBP16.07■□□□□ 0.16
NPC2-201ENST00000238633 SOCS7O14512 581 aa16.06■□□□□ 0.16
NPC2-201ENST00000238633 FAM9AQ8IZU1 332 aaPredicted RBP16.06■□□□□ 0.16
NPC2-201ENST00000238633 SIGLEC1Q9BZZ2 1709 aa16.05■□□□□ 0.16
NPC2-201ENST00000238633 DISP3Q9P2K9 1392 aa16.03■□□□□ 0.16
NPC2-201ENST00000238633 MLECQ14165 292 aa16.03■□□□□ 0.16
NPC2-201ENST00000238633 RAPGEF6Q8TEU7 1601 aa16.03■□□□□ 0.16
NPC2-201ENST00000238633 SAMD9Q5K651 1589 aa16.03■□□□□ 0.16
NPC2-201ENST00000238633 RICTORQ6R327 1708 aa16.02■□□□□ 0.16
NPC2-201ENST00000238633 POGZQ7Z3K3 1410 aa16.02■□□□□ 0.15
NPC2-201ENST00000238633 FANCAO15360 1455 aa16.01■□□□□ 0.15
NPC2-201ENST00000238633 PLEKHD1A6NEE1 506 aa16■□□□□ 0.15
NPC2-201ENST00000238633 ZMYM4Q5VZL5 1548 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms