RNA–Protein interactions for RNA: ENST00000238633.6

NPC2-201, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene NPC2, Length 796 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-201ENST00000238633 NISCHQ9Y2I1 1504 aa24.1■■□□□ 1.45
NPC2-201ENST00000238633 AEBP2Q6ZN18 517 aaPredicted RBP22.87■■□□□ 1.25
NPC2-201ENST00000238633 CHIC1Q5VXU3 224 aa22.32■■□□□ 1.16
NPC2-201ENST00000238633 ABCC9O60706 1549 aa22.26■■□□□ 1.15
NPC2-201ENST00000238633 CCDC180Q9P1Z9 1646 aa21.67■■□□□ 1.06
NPC2-201ENST00000238633 DNAJC5BQ9UF47 199 aa21.45■■□□□ 1.02
NPC2-201ENST00000238633 RB1CC1Q8TDY2 1594 aa20.89■□□□□ 0.94
NPC2-201ENST00000238633 PABPN1Q86U42 306 aaKnown RBP eCLIP20.73■□□□□ 0.91
NPC2-201ENST00000238633 NACADO15069 1562 aa20.67■□□□□ 0.9
NPC2-201ENST00000238633 DCAF8L2P0C7V8 631 aa20.55■□□□□ 0.88
NPC2-201ENST00000238633 BICRAQ9NZM4 1560 aa20.41■□□□□ 0.86
NPC2-201ENST00000238633 UNC13AQ9UPW8 1703 aa20.37■□□□□ 0.85
NPC2-201ENST00000238633 MYO15BQ96JP2 1530 aa20.26■□□□□ 0.83
NPC2-201ENST00000238633 CECR2Q9BXF3 1484 aa20.1■□□□□ 0.81
NPC2-201ENST00000238633 CC2D2AQ9P2K1 1620 aa20.04■□□□□ 0.8
NPC2-201ENST00000238633 SHROOM4Q9ULL8 1493 aa19.99■□□□□ 0.79
NPC2-201ENST00000238633 DNAJC5Q9H3Z4 198 aa19.95■□□□□ 0.78
NPC2-201ENST00000238633 EIF4G1Q04637 1599 aaKnown RBP19.9■□□□□ 0.78
NPC2-201ENST00000238633 ZCCHC6Q5VYS8 1495 aaKnown RBP19.86■□□□□ 0.77
NPC2-201ENST00000238633 DCAF1Q9Y4B6 1507 aa19.84■□□□□ 0.77
NPC2-201ENST00000238633 SCRIBQ14160 1630 aa19.8■□□□□ 0.76
NPC2-201ENST00000238633 PHF23Q9BUL5 403 aaPredicted RBP19.66■□□□□ 0.74
NPC2-201ENST00000238633 SENP3Q9H4L4 574 aaPredicted RBP19.36■□□□□ 0.69
NPC2-201ENST00000238633 CUX2O14529 1486 aa19.33■□□□□ 0.68
NPC2-201ENST00000238633 ERCC6Q03468 1493 aa19.19■□□□□ 0.66
NPC2-201ENST00000238633 NCAPD3P42695 1498 aa19.17■□□□□ 0.66
NPC2-201ENST00000238633 ATAD2BQ9ULI0 1458 aa19.04■□□□□ 0.64
NPC2-201ENST00000238633 NESP48681 1621 aa19.03■□□□□ 0.64
NPC2-201ENST00000238633 HMGXB3Q12766 1538 aa18.91■□□□□ 0.62
NPC2-201ENST00000238633 SMARCA2P51531 1590 aa18.88■□□□□ 0.61
NPC2-201ENST00000238633 TRIM41Q8WV44 630 aa18.84■□□□□ 0.61
NPC2-201ENST00000238633 SMARCA4P51532 1647 aa18.84■□□□□ 0.61
NPC2-201ENST00000238633 THOC2Q8NI27 1593 aaKnown RBP18.84■□□□□ 0.61
NPC2-201ENST00000238633 BAZ1BQ9UIG0 1483 aaKnown RBP18.77■□□□□ 0.6
NPC2-201ENST00000238633 LAMC3Q9Y6N6 1575 aa18.7■□□□□ 0.58
NPC2-201ENST00000238633 PEG3Q9GZU2 1588 aa18.68■□□□□ 0.58
NPC2-201ENST00000238633 BAZ1AQ9NRL2 1556 aaPredicted RBP18.67■□□□□ 0.58
NPC2-201ENST00000238633 PDS5BQ9NTI5 1447 aa18.66■□□□□ 0.58
NPC2-201ENST00000238633 KIF21AQ7Z4S6 1674 aa18.63■□□□□ 0.57
NPC2-201ENST00000238633 MROH2BQ7Z745 1585 aa18.59■□□□□ 0.57
NPC2-201ENST00000238633 CADPSQ9ULU8 1353 aa18.57■□□□□ 0.56
NPC2-201ENST00000238633 MRC2Q9UBG0 1479 aa18.53■□□□□ 0.56
NPC2-201ENST00000238633 WDR62O43379 1518 aa18.49■□□□□ 0.55
NPC2-201ENST00000238633 OSCARQ8IYS5 282 aa18.43■□□□□ 0.54
NPC2-201ENST00000238633 CEP164Q9UPV0 1460 aa18.35■□□□□ 0.53
NPC2-201ENST00000238633 FANCD2Q9BXW9 1451 aa18.33■□□□□ 0.52
NPC2-201ENST00000238633 WIZO95785 1651 aa18.28■□□□□ 0.52
NPC2-201ENST00000238633 CFTRP13569 1480 aa18.26■□□□□ 0.51
NPC2-201ENST00000238633 URB2Q14146 1524 aaKnown RBP18.23■□□□□ 0.51
NPC2-201ENST00000238633 RIMBP3CA6NJZ7 1639 aa18.17■□□□□ 0.5
NPC2-201ENST00000238633 RIMBP3BA6NNM3 1639 aa18.17■□□□□ 0.5
NPC2-201ENST00000238633 RIMBP3Q9UFD9 1639 aa18.17■□□□□ 0.5
NPC2-201ENST00000238633 ARHGEF11O15085 1522 aa18.1■□□□□ 0.49
NPC2-201ENST00000238633 ZNF608Q9ULD9 1512 aaPredicted RBP18.1■□□□□ 0.49
NPC2-201ENST00000238633 PLPPR3Q6T4P5 718 aa18.1■□□□□ 0.49
NPC2-201ENST00000238633 RSF1Q96T23 1441 aaPredicted RBP18.06■□□□□ 0.48
NPC2-201ENST00000238633 CYB5RLQ6IPT4 315 aa18.05■□□□□ 0.48
NPC2-201ENST00000238633 IFT140Q96RY7 1462 aa18.02■□□□□ 0.48
NPC2-201ENST00000238633 TOP2AP11388 1531 aaKnown RBP18.01■□□□□ 0.47
NPC2-201ENST00000238633 FOXD1Q16676 465 aa17.99■□□□□ 0.47
NPC2-201ENST00000238633 TRHP20396 242 aaPredicted RBP17.94■□□□□ 0.46
NPC2-201ENST00000238633 ARAP1Q96P48 1450 aa17.93■□□□□ 0.46
NPC2-201ENST00000238633 TOPBP1Q92547 1522 aa17.93■□□□□ 0.46
NPC2-201ENST00000238633 CCDC88BA6NC98 1476 aa17.88■□□□□ 0.45
NPC2-201ENST00000238633 AQRO60306 1485 aaKnown RBP eCLIP17.88■□□□□ 0.45
NPC2-201ENST00000238633 EIF4G3O43432 1585 aaKnown RBP17.87■□□□□ 0.45
NPC2-201ENST00000238633 FBLN2P98095 1184 aa17.81■□□□□ 0.44
NPC2-201ENST00000238633 PRDM2Q13029 1718 aa17.8■□□□□ 0.44
NPC2-201ENST00000238633 ABCC8Q09428 1581 aa17.79■□□□□ 0.44
NPC2-201ENST00000238633 TARBP1Q13395 1621 aaKnown RBP17.79■□□□□ 0.44
NPC2-201ENST00000238633 CHD1O14646 1710 aa17.78■□□□□ 0.44
NPC2-201ENST00000238633 DNMBPQ6XZF7 1577 aa17.77■□□□□ 0.44
NPC2-201ENST00000238633 POLA1P09884 1462 aaPredicted RBP17.73■□□□□ 0.43
NPC2-201ENST00000238633 TDRD9Q8NDG6 1382 aaKnown RBP17.71■□□□□ 0.43
NPC2-201ENST00000238633 RAD54L2Q9Y4B4 1467 aa17.7■□□□□ 0.42
NPC2-201ENST00000238633 CLASP1Q7Z460 1538 aa17.66■□□□□ 0.42
NPC2-201ENST00000238633 SOGA1O94964 1423 aa17.64■□□□□ 0.42
NPC2-201ENST00000238633 SNAPC4Q5SXM2 1469 aa17.63■□□□□ 0.41
NPC2-201ENST00000238633 CHMP7Q8WUX9 453 aaPredicted RBP17.61■□□□□ 0.41
NPC2-201ENST00000238633 FGD5Q6ZNL6 1462 aa17.54■□□□□ 0.4
NPC2-201ENST00000238633 MAGI1Q96QZ7 1491 aaPredicted RBP17.54■□□□□ 0.4
NPC2-201ENST00000238633 SYNJ1O43426 1573 aa17.53■□□□□ 0.4
NPC2-201ENST00000238633 GRIN2BQ13224 1484 aa17.51■□□□□ 0.39
NPC2-201ENST00000238633 GAPVD1Q14C86 1478 aa17.51■□□□□ 0.39
NPC2-201ENST00000238633 SYNJ2O15056 1496 aa17.5■□□□□ 0.39
NPC2-201ENST00000238633 WDR97A6NE52 1622 aa17.48■□□□□ 0.39
NPC2-201ENST00000238633 CUX1P39880 1505 aa17.47■□□□□ 0.39
NPC2-201ENST00000238633 ERCC6L2Q5T890 1561 aa17.4■□□□□ 0.38
NPC2-201ENST00000238633 PPP6R1Q9UPN7 881 aa17.34■□□□□ 0.37
NPC2-201ENST00000238633 ABCA10Q8WWZ4 1543 aa17.31■□□□□ 0.36
NPC2-201ENST00000238633 PBRM1Q86U86 1689 aa17.29■□□□□ 0.36
NPC2-201ENST00000238633 ADRA2BP18089 450 aa17.29■□□□□ 0.36
NPC2-201ENST00000238633 GRIN2AQ12879 1464 aa17.29■□□□□ 0.36
NPC2-201ENST00000238633 NUP160Q12769 1436 aa17.29■□□□□ 0.36
NPC2-201ENST00000238633 ABCA5Q8WWZ7 1642 aa17.29■□□□□ 0.36
NPC2-201ENST00000238633 CEP170Q5SW79 1584 aa17.28■□□□□ 0.36
NPC2-201ENST00000238633 SHROOM2Q13796 1616 aa17.2■□□□□ 0.34
NPC2-201ENST00000238633 ADAMTS12P58397 1594 aa17.19■□□□□ 0.34
NPC2-201ENST00000238633 FHAD1B1AJZ9 1412 aa17.16■□□□□ 0.34
NPC2-201ENST00000238633 KDM4FA0A1W2PPD8 638 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms