RNA–Protein interactions for RNA: ENST00000234179.6

PRKD3-201, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKD3, Length 5,900 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-201ENST00000234179 CEP170Q5SW79 1584 aa4.11□□□□□ -1.75
PRKD3-201ENST00000234179 ABCC10Q5T3U5 1492 aa4.1□□□□□ -1.75
PRKD3-201ENST00000234179 TOP2BQ02880 1626 aa4.08□□□□□ -1.76
PRKD3-201ENST00000234179 BIVM-ERCC5R4GMW8 1640 aa4.08□□□□□ -1.76
PRKD3-201ENST00000234179 PLPPR3Q6T4P5 718 aa4.08□□□□□ -1.76
PRKD3-201ENST00000234179 FAM9AQ8IZU1 332 aaPredicted RBP4.08□□□□□ -1.76
PRKD3-201ENST00000234179 CARMIL2Q6F5E8 1435 aa4.08□□□□□ -1.76
PRKD3-201ENST00000234179 PRG4Q92954 1404 aaPredicted RBP4.08□□□□□ -1.76
PRKD3-201ENST00000234179 PLB1Q6P1J6 1458 aa4.08□□□□□ -1.76
PRKD3-201ENST00000234179 KIAA0586Q9BVV6 1533 aa4.08□□□□□ -1.76
PRKD3-201ENST00000234179 JPH4Q96JJ6 628 aa4.08□□□□□ -1.76
PRKD3-201ENST00000234179 TEX14Q8IWB6 1497 aa4.07□□□□□ -1.76
PRKD3-201ENST00000234179 FAM69CQ0P6D2 419 aa4.06□□□□□ -1.76
PRKD3-201ENST00000234179 GLI2P10070 1586 aa4.06□□□□□ -1.76
PRKD3-201ENST00000234179 KDM6BO15054 1643 aa4.06□□□□□ -1.76
PRKD3-201ENST00000234179 UHRF1BP1LA0JNW5 1464 aa4.06□□□□□ -1.76
PRKD3-201ENST00000234179 CUL7Q14999 1698 aa4.06□□□□□ -1.76
PRKD3-201ENST00000234179 KIF27Q86VH2 1401 aa4.05□□□□□ -1.76
PRKD3-201ENST00000234179 DIP2BQ9P265 1576 aa4.05□□□□□ -1.76
PRKD3-201ENST00000234179 PHLDB1Q86UU1 1377 aa4.04□□□□□ -1.76
PRKD3-201ENST00000234179 TNIKQ9UKE5 1360 aa4.04□□□□□ -1.76
PRKD3-201ENST00000234179 RUSC2Q8N2Y8 1516 aa4.04□□□□□ -1.76
PRKD3-201ENST00000234179 SCAF1Q9H7N4 1312 aaKnown RBP4.04□□□□□ -1.76
PRKD3-201ENST00000234179 PTPRGP23470 1445 aa4.04□□□□□ -1.76
PRKD3-201ENST00000234179 ERCC6L2Q5T890 1561 aa4.04□□□□□ -1.76
PRKD3-201ENST00000234179 ABCC2Q92887 1545 aa4.03□□□□□ -1.76
PRKD3-201ENST00000234179 KIF13AQ9H1H9 1805 aa4.03□□□□□ -1.76
PRKD3-201ENST00000234179 UACAQ9BZF9 1416 aa4.01□□□□□ -1.77
PRKD3-201ENST00000234179 GOLGA3Q08378 1498 aa4.01□□□□□ -1.77
PRKD3-201ENST00000234179 ADCY10Q96PN6 1610 aa4□□□□□ -1.77
PRKD3-201ENST00000234179 KDM5BQ9UGL1 1544 aa4□□□□□ -1.77
PRKD3-201ENST00000234179 IGF1RP08069 1367 aa3.99□□□□□ -1.77
PRKD3-201ENST00000234179 ASXL2Q76L83 1435 aa3.99□□□□□ -1.77
PRKD3-201ENST00000234179 CARMIL1Q5VZK9 1371 aa3.99□□□□□ -1.77
PRKD3-201ENST00000234179 MAGI3Q5TCQ9 1506 aa3.99□□□□□ -1.77
PRKD3-201ENST00000234179 IQGAP2Q13576 1575 aa3.99□□□□□ -1.77
PRKD3-201ENST00000234179 ADGRL1O94910 1474 aa3.99□□□□□ -1.77
PRKD3-201ENST00000234179 UGGT2Q9NYU1 1516 aa3.98□□□□□ -1.77
PRKD3-201ENST00000234179 KDM4FA0A1W2PPD8 638 aa3.98□□□□□ -1.77
PRKD3-201ENST00000234179 EPRSP07814 1512 aaKnown RBP3.98□□□□□ -1.77
PRKD3-201ENST00000234179 FBXO41Q8TF61 875 aa3.97□□□□□ -1.77
PRKD3-201ENST00000234179 WDR7Q9Y4E6 1490 aa3.97□□□□□ -1.77
PRKD3-201ENST00000234179 PIAS4Q8N2W9 510 aaPredicted RBP3.97□□□□□ -1.77
PRKD3-201ENST00000234179 RAPGEF2Q9Y4G8 1499 aa3.96□□□□□ -1.77
PRKD3-201ENST00000234179 CFAP43Q8NDM7 1665 aa3.96□□□□□ -1.78
PRKD3-201ENST00000234179 ILDR1Q86SU0 546 aaPredicted RBP3.96□□□□□ -1.78
PRKD3-201ENST00000234179 MAP3K4Q9Y6R4 1608 aa3.96□□□□□ -1.78
PRKD3-201ENST00000234179 ARAP3Q8WWN8 1544 aa3.96□□□□□ -1.78
PRKD3-201ENST00000234179 POGZQ7Z3K3 1410 aa3.95□□□□□ -1.78
PRKD3-201ENST00000234179 NEO1Q92859 1461 aa3.95□□□□□ -1.78
PRKD3-201ENST00000234179 CD109Q6YHK3 1445 aa3.95□□□□□ -1.78
PRKD3-201ENST00000234179 SUPT5HO00267 1087 aaKnown RBP3.94□□□□□ -1.78
PRKD3-201ENST00000234179 HECW2Q9P2P5 1572 aa3.94□□□□□ -1.78
PRKD3-201ENST00000234179 KIAA0556O60303 1618 aa3.94□□□□□ -1.78
PRKD3-201ENST00000234179 DISP1Q96F81 1524 aa3.93□□□□□ -1.78
PRKD3-201ENST00000234179 PPRC1Q5VV67 1664 aaKnown RBP3.93□□□□□ -1.78
PRKD3-201ENST00000234179 MAGI2Q86UL8 1455 aa3.92□□□□□ -1.78
PRKD3-201ENST00000234179 DMRT2Q9Y5R5 561 aa3.92□□□□□ -1.78
PRKD3-201ENST00000234179 ZCCHC11Q5TAX3 1644 aaKnown RBP3.92□□□□□ -1.78
PRKD3-201ENST00000234179 ABCA8O94911 1581 aa3.92□□□□□ -1.78
PRKD3-201ENST00000234179 TSPOAP1O95153 1857 aa3.92□□□□□ -1.78
PRKD3-201ENST00000234179 CFAP74Q9C0B2 1584 aa3.91□□□□□ -1.78
PRKD3-201ENST00000234179 EEA1Q15075 1411 aa3.91□□□□□ -1.78
PRKD3-201ENST00000234179 AKNAQ7Z591 1439 aa3.91□□□□□ -1.78
PRKD3-201ENST00000234179 FANCAO15360 1455 aa3.9□□□□□ -1.78
PRKD3-201ENST00000234179 COL17A1Q9UMD9 1497 aaPredicted RBP3.9□□□□□ -1.79
PRKD3-201ENST00000234179 PTPRMP28827 1452 aa3.9□□□□□ -1.79
PRKD3-201ENST00000234179 FHOD3Q2V2M9 1422 aa3.9□□□□□ -1.79
PRKD3-201ENST00000234179 ABCA9Q8IUA7 1624 aa3.89□□□□□ -1.79
PRKD3-201ENST00000234179 IQSEC2Q5JU85 1478 aa3.89□□□□□ -1.79
PRKD3-201ENST00000234179 PCF11O94913 1555 aaKnown RBP3.89□□□□□ -1.79
PRKD3-201ENST00000234179 EFCAB5A4FU69 1503 aa3.89□□□□□ -1.79
PRKD3-201ENST00000234179 DENND4BO75064 1496 aaPredicted RBP3.89□□□□□ -1.79
PRKD3-201ENST00000234179 ADAMTSL3P82987 1691 aa3.89□□□□□ -1.79
PRKD3-201ENST00000234179 CTTNBP2Q8WZ74 1663 aa3.89□□□□□ -1.79
PRKD3-201ENST00000234179 ARHGEF40Q8TER5 1519 aa3.88□□□□□ -1.79
PRKD3-201ENST00000234179 PRXQ9BXM0 1461 aa3.88□□□□□ -1.79
PRKD3-201ENST00000234179 CDK11AQ9UQ88 783 aaPredicted RBP3.88□□□□□ -1.79
PRKD3-201ENST00000234179 ZMYM4Q5VZL5 1548 aa3.88□□□□□ -1.79
PRKD3-201ENST00000234179 PLEKHD1A6NEE1 506 aa3.88□□□□□ -1.79
PRKD3-201ENST00000234179 ARID4BQ4LE39 1312 aaPredicted RBP3.86□□□□□ -1.79
PRKD3-201ENST00000234179 KCNH8Q96L42 1107 aa3.86□□□□□ -1.79
PRKD3-201ENST00000234179 BCORL1Q5H9F3 1711 aa3.86□□□□□ -1.79
PRKD3-201ENST00000234179 TTBK1Q5TCY1 1321 aaPredicted RBP3.86□□□□□ -1.79
PRKD3-201ENST00000234179 ATP10BO94823 1461 aa3.86□□□□□ -1.79
PRKD3-201ENST00000234179 PTPRTO14522 1441 aa3.86□□□□□ -1.79
PRKD3-201ENST00000234179 CNTLNQ9NXG0 1405 aa3.86□□□□□ -1.79
PRKD3-201ENST00000234179 ZFYVE16Q7Z3T8 1539 aa3.85□□□□□ -1.79
PRKD3-201ENST00000234179 CERKQ8TCT0 537 aa3.85□□□□□ -1.79
PRKD3-201ENST00000234179 LMTK3Q96Q04 1460 aa3.85□□□□□ -1.79
PRKD3-201ENST00000234179 KIF21BO75037 1637 aa3.85□□□□□ -1.79
PRKD3-201ENST00000234179 RAPGEF6Q8TEU7 1601 aa3.85□□□□□ -1.79
PRKD3-201ENST00000234179 SAMD9Q5K651 1589 aa3.85□□□□□ -1.79
PRKD3-201ENST00000234179 EFCAB2Q5VUJ9 269 aa3.85□□□□□ -1.79
PRKD3-201ENST00000234179 POTEDQ86YR6 584 aa3.85□□□□□ -1.79
PRKD3-201ENST00000234179 C9orf84Q5VXU9 1444 aa3.84□□□□□ -1.79
PRKD3-201ENST00000234179 YEATS2Q9ULM3 1422 aa3.84□□□□□ -1.79
PRKD3-201ENST00000234179 TTC37Q6PGP7 1564 aa3.84□□□□□ -1.79
PRKD3-201ENST00000234179 REREQ9P2R6 1566 aa3.84□□□□□ -1.79
PRKD3-201ENST00000234179 ATP10AO60312 1499 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms