RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 RTN4Q9NQC3 1192 aaKnown RBP19.78■□□□□ 0.76
PCDHB3-201ENST00000231130 SALL2Q9Y467 1007 aaPredicted RBP19.78■□□□□ 0.76
PCDHB3-201ENST00000231130 HNRNPUQ00839 825 aaKnown RBP eCLIP19.77■□□□□ 0.75
PCDHB3-201ENST00000231130 RRBP1Q9P2E9 1410 aaKnown RBP19.75■□□□□ 0.75
PCDHB3-201ENST00000231130 PPP1R15AO75807 674 aaPredicted RBP19.73■□□□□ 0.75
PCDHB3-201ENST00000231130 CNGB1Q14028 1251 aaPredicted RBP19.73■□□□□ 0.75
PCDHB3-201ENST00000231130 WDR97A6NE52 1622 aa19.71■□□□□ 0.75
PCDHB3-201ENST00000231130 UNC13AQ9UPW8 1703 aa19.71■□□□□ 0.75
PCDHB3-201ENST00000231130 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.71■□□□□ 0.75
PCDHB3-201ENST00000231130 ATAD2BQ9ULI0 1458 aa19.69■□□□□ 0.74
PCDHB3-201ENST00000231130 SETD5Q9C0A6 1442 aa19.68■□□□□ 0.74
PCDHB3-201ENST00000231130 MYT1LQ9UL68 1186 aa19.66■□□□□ 0.74
PCDHB3-201ENST00000231130 PRXQ9BXM0 1461 aa19.66■□□□□ 0.74
PCDHB3-201ENST00000231130 MAPKBP1O60336 1514 aa19.64■□□□□ 0.73
PCDHB3-201ENST00000231130 ARHGAP35Q9NRY4 1499 aa19.62■□□□□ 0.73
PCDHB3-201ENST00000231130 KIF27Q86VH2 1401 aa19.62■□□□□ 0.73
PCDHB3-201ENST00000231130 PHLDB1Q86UU1 1377 aa19.6■□□□□ 0.73
PCDHB3-201ENST00000231130 TONSLQ96HA7 1378 aa19.6■□□□□ 0.73
PCDHB3-201ENST00000231130 FANCIQ9NVI1 1328 aa19.6■□□□□ 0.73
PCDHB3-201ENST00000231130 CCER2I3L3R5 266 aa19.59■□□□□ 0.73
PCDHB3-201ENST00000231130 RTL5Q5HYW3 569 aaPredicted RBP19.59■□□□□ 0.73
PCDHB3-201ENST00000231130 SENP3-EIF4A1A0A087X0R7 540 aa19.59■□□□□ 0.73
PCDHB3-201ENST00000231130 TOP2BQ02880 1626 aa19.57■□□□□ 0.72
PCDHB3-201ENST00000231130 EIF5BO60841 1220 aaKnown RBP19.56■□□□□ 0.72
PCDHB3-201ENST00000231130 FAM9BQ8IZU0 186 aa19.56■□□□□ 0.72
PCDHB3-201ENST00000231130 BICRAQ9NZM4 1560 aa19.54■□□□□ 0.72
PCDHB3-201ENST00000231130 B4GALNT3Q6L9W6 998 aa19.53■□□□□ 0.72
PCDHB3-201ENST00000231130 ERICH3Q5RHP9 1530 aa19.52■□□□□ 0.72
PCDHB3-201ENST00000231130 IL27Q8NEV9 243 aa19.52■□□□□ 0.71
PCDHB3-201ENST00000231130 CUX2O14529 1486 aa19.51■□□□□ 0.71
PCDHB3-201ENST00000231130 CCDC184Q52MB2 194 aa19.47■□□□□ 0.71
PCDHB3-201ENST00000231130 CHIC2Q9UKJ5 165 aa19.46■□□□□ 0.71
PCDHB3-201ENST00000231130 NOP58Q9Y2X3 529 aaKnown RBP19.46■□□□□ 0.71
PCDHB3-201ENST00000231130 CUX1P39880 1505 aa19.45■□□□□ 0.7
PCDHB3-201ENST00000231130 POLR3GLQ9BT43 218 aa19.45■□□□□ 0.7
PCDHB3-201ENST00000231130 PEG3Q9GZU2 1588 aa19.43■□□□□ 0.7
PCDHB3-201ENST00000231130 LRRC9Q6ZRR7 1453 aa19.42■□□□□ 0.7
PCDHB3-201ENST00000231130 CARMIL1Q5VZK9 1371 aa19.41■□□□□ 0.7
PCDHB3-201ENST00000231130 RRP7BPQ9NSQ0 103 aa19.41■□□□□ 0.7
PCDHB3-201ENST00000231130 PAK3O75914 559 aaPredicted RBP19.41■□□□□ 0.7
PCDHB3-201ENST00000231130 IGF1RP08069 1367 aa19.4■□□□□ 0.7
PCDHB3-201ENST00000231130 TIMELESSQ9UNS1 1208 aa19.4■□□□□ 0.7
PCDHB3-201ENST00000231130 HSPA5P11021 654 aaKnown RBP19.39■□□□□ 0.69
PCDHB3-201ENST00000231130 ERICH6BQ5W0A0 696 aa19.38■□□□□ 0.69
PCDHB3-201ENST00000231130 MRS2Q9HD23 443 aa19.38■□□□□ 0.69
PCDHB3-201ENST00000231130 TIAM1Q13009 1591 aa19.37■□□□□ 0.69
PCDHB3-201ENST00000231130 ARID3CA6NKF2 412 aa19.37■□□□□ 0.69
PCDHB3-201ENST00000231130 FHOD3Q2V2M9 1422 aa19.37■□□□□ 0.69
PCDHB3-201ENST00000231130 PPP4R2Q9NY27 417 aa19.36■□□□□ 0.69
PCDHB3-201ENST00000231130 FOXD1Q16676 465 aa19.35■□□□□ 0.69
PCDHB3-201ENST00000231130 BIVM-ERCC5R4GMW8 1640 aa19.33■□□□□ 0.69
PCDHB3-201ENST00000231130 WASHC2AQ641Q2 1341 aa19.33■□□□□ 0.69
PCDHB3-201ENST00000231130 MTUS2Q5JR59 1369 aa19.29■□□□□ 0.68
PCDHB3-201ENST00000231130 ZBTB47Q9UFB7 747 aaPredicted RBP19.29■□□□□ 0.68
PCDHB3-201ENST00000231130 ANP32AP39687 249 aaKnown RBP19.28■□□□□ 0.68
PCDHB3-201ENST00000231130 EIF4G2P78344 907 aaKnown RBP eCLIP19.28■□□□□ 0.68
PCDHB3-201ENST00000231130 UBE2Q2Q8WVN8 375 aa19.28■□□□□ 0.68
PCDHB3-201ENST00000231130 FHAD1B1AJZ9 1412 aa19.26■□□□□ 0.67
PCDHB3-201ENST00000231130 NPM2Q86SE8 214 aaKnown RBP19.25■□□□□ 0.67
PCDHB3-201ENST00000231130 CCDC18Q5T9S5 1454 aa19.25■□□□□ 0.67
PCDHB3-201ENST00000231130 C11orf95C9JLR9 678 aaPredicted RBP19.24■□□□□ 0.67
PCDHB3-201ENST00000231130 ZNF326Q5BKZ1 582 aaKnown RBP19.23■□□□□ 0.67
PCDHB3-201ENST00000231130 PRKRIP1Q9H875 184 aaPredicted RBP19.2■□□□□ 0.66
PCDHB3-201ENST00000231130 LAS1LQ9Y4W2 734 aaKnown RBP19.19■□□□□ 0.66
PCDHB3-201ENST00000231130 PTPRKQ15262 1439 aa19.19■□□□□ 0.66
PCDHB3-201ENST00000231130 L3MBTL2Q969R5 705 aa19.19■□□□□ 0.66
PCDHB3-201ENST00000231130 PCF11O94913 1555 aaKnown RBP19.18■□□□□ 0.66
PCDHB3-201ENST00000231130 AQRO60306 1485 aaKnown RBP eCLIP19.17■□□□□ 0.66
PCDHB3-201ENST00000231130 FGD6Q6ZV73 1430 aa19.16■□□□□ 0.66
PCDHB3-201ENST00000231130 UACAQ9BZF9 1416 aa19.13■□□□□ 0.65
PCDHB3-201ENST00000231130 NEFMP07197 916 aa19.13■□□□□ 0.65
PCDHB3-201ENST00000231130 FGD5Q6ZNL6 1462 aa19.13■□□□□ 0.65
PCDHB3-201ENST00000231130 CFTRP13569 1480 aa19.12■□□□□ 0.65
PCDHB3-201ENST00000231130 IPO9Q96P70 1041 aaKnown RBP19.1■□□□□ 0.65
PCDHB3-201ENST00000231130 AKNAQ7Z591 1439 aa19.09■□□□□ 0.65
PCDHB3-201ENST00000231130 MAP3K1Q13233 1512 aa19.09■□□□□ 0.65
PCDHB3-201ENST00000231130 MPHOSPH9Q99550 1183 aa19.08■□□□□ 0.64
PCDHB3-201ENST00000231130 ZBED9Q6R2W3 1325 aa19.07■□□□□ 0.64
PCDHB3-201ENST00000231130 NAIPQ13075 1403 aa19.07■□□□□ 0.64
PCDHB3-201ENST00000231130 RAD54L2Q9Y4B4 1467 aa19.06■□□□□ 0.64
PCDHB3-201ENST00000231130 NBPF8Q3BBV2 869 aa19.06■□□□□ 0.64
PCDHB3-201ENST00000231130 BRPF3Q9ULD4 1205 aa19.06■□□□□ 0.64
PCDHB3-201ENST00000231130 HFM1A2PYH4 1435 aa19.05■□□□□ 0.64
PCDHB3-201ENST00000231130 NCAPD3P42695 1498 aa19.05■□□□□ 0.64
PCDHB3-201ENST00000231130 FMN1Q68DA7 1419 aa19.05■□□□□ 0.64
PCDHB3-201ENST00000231130 CNTLNQ9NXG0 1405 aa19.04■□□□□ 0.64
PCDHB3-201ENST00000231130 CCDC7Q96M83 1385 aa19.03■□□□□ 0.64
PCDHB3-201ENST00000231130 PKNOX2Q96KN3 472 aa19.02■□□□□ 0.63
PCDHB3-201ENST00000231130 CASKIN1Q8WXD9 1431 aa19.01■□□□□ 0.63
PCDHB3-201ENST00000231130 KIF7Q2M1P5 1343 aa19.01■□□□□ 0.63
PCDHB3-201ENST00000231130 SLC4A1APQ9BWU0 796 aaKnown RBP18.99■□□□□ 0.63
PCDHB3-201ENST00000231130 CADPSQ9ULU8 1353 aa18.98■□□□□ 0.63
PCDHB3-201ENST00000231130 FYCO1Q9BQS8 1478 aa18.98■□□□□ 0.63
PCDHB3-201ENST00000231130 PTPN23Q9H3S7 1636 aa18.98■□□□□ 0.63
PCDHB3-201ENST00000231130 TMC1Q8TDI8 760 aa18.98■□□□□ 0.63
PCDHB3-201ENST00000231130 NCOA2Q15596 1464 aa18.97■□□□□ 0.63
PCDHB3-201ENST00000231130 NUDCQ9Y266 331 aa18.96■□□□□ 0.63
PCDHB3-201ENST00000231130 CFAP43Q8NDM7 1665 aa18.95■□□□□ 0.62
PCDHB3-201ENST00000231130 MYOM3Q5VTT5 1437 aa18.95■□□□□ 0.62
PCDHB3-201ENST00000231130 TDRD9Q8NDG6 1382 aaKnown RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms