RNA–Protein interactions for RNA: ENST00000230418.8

PTK7-201, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 1 (best)

Gene PTK7, Length 3,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-201ENST00000230418 FHOD3Q2V2M9 1422 aa20.49■□□□□ 0.87
PTK7-201ENST00000230418 CDK11AQ9UQ88 783 aaPredicted RBP20.49■□□□□ 0.87
PTK7-201ENST00000230418 SCAF1Q9H7N4 1312 aaKnown RBP20.48■□□□□ 0.87
PTK7-201ENST00000230418 CFTRP13569 1480 aa20.47■□□□□ 0.87
PTK7-201ENST00000230418 NEFLP07196 543 aa20.46■□□□□ 0.87
PTK7-201ENST00000230418 TONSLQ96HA7 1378 aa20.45■□□□□ 0.86
PTK7-201ENST00000230418 PDS5BQ9NTI5 1447 aa20.44■□□□□ 0.86
PTK7-201ENST00000230418 CUX1P39880 1505 aa20.44■□□□□ 0.86
PTK7-201ENST00000230418 ERCC6Q03468 1493 aa20.44■□□□□ 0.86
PTK7-201ENST00000230418 BCANQ96GW7 911 aa20.41■□□□□ 0.86
PTK7-201ENST00000230418 CC2D2AQ9P2K1 1620 aa20.4■□□□□ 0.86
PTK7-201ENST00000230418 KIF21BO75037 1637 aa20.4■□□□□ 0.86
PTK7-201ENST00000230418 FHAD1B1AJZ9 1412 aa20.39■□□□□ 0.85
PTK7-201ENST00000230418 ANP32CO43423 234 aa20.38■□□□□ 0.85
PTK7-201ENST00000230418 TOP2BQ02880 1626 aa20.35■□□□□ 0.85
PTK7-201ENST00000230418 PEG3Q9GZU2 1588 aa20.35■□□□□ 0.85
PTK7-201ENST00000230418 ARAP1Q96P48 1450 aa20.34■□□□□ 0.85
PTK7-201ENST00000230418 HMGXB3Q12766 1538 aa20.34■□□□□ 0.85
PTK7-201ENST00000230418 RAB3GAP2Q9H2M9 1393 aa20.31■□□□□ 0.84
PTK7-201ENST00000230418 PRXQ9BXM0 1461 aa20.29■□□□□ 0.84
PTK7-201ENST00000230418 KCNH8Q96L42 1107 aa20.29■□□□□ 0.84
PTK7-201ENST00000230418 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.27■□□□□ 0.845e-6■■■□□ 17.6
PTK7-201ENST00000230418 FOXD1Q16676 465 aa20.25■□□□□ 0.83
PTK7-201ENST00000230418 SLC4A1APQ9BWU0 796 aaKnown RBP20.25■□□□□ 0.83
PTK7-201ENST00000230418 CFDP1Q9UEE9 299 aaPredicted RBP20.25■□□□□ 0.83
PTK7-201ENST00000230418 ARHGAP35Q9NRY4 1499 aa20.23■□□□□ 0.83
PTK7-201ENST00000230418 PLEKHD1A6NEE1 506 aa20.21■□□□□ 0.83
PTK7-201ENST00000230418 SETD5Q9C0A6 1442 aa20.21■□□□□ 0.83
PTK7-201ENST00000230418 KDM2AQ9Y2K7 1162 aa20.21■□□□□ 0.83
PTK7-201ENST00000230418 DHX57Q6P158 1386 aaKnown RBP20.2■□□□□ 0.82
PTK7-201ENST00000230418 AQRO60306 1485 aaKnown RBP eCLIP20.2■□□□□ 0.822e-6■■■■■ 31
PTK7-201ENST00000230418 TSPY4P0CV99 314 aa20.18■□□□□ 0.82
PTK7-201ENST00000230418 TSPY10P0CW01 314 aa20.18■□□□□ 0.82
PTK7-201ENST00000230418 GAPVD1Q14C86 1478 aa20.17■□□□□ 0.82
PTK7-201ENST00000230418 FMN1Q68DA7 1419 aa20.17■□□□□ 0.82
PTK7-201ENST00000230418 POLA1P09884 1462 aaPredicted RBP20.15■□□□□ 0.82
PTK7-201ENST00000230418 PHLDB1Q86UU1 1377 aa20.15■□□□□ 0.82
PTK7-201ENST00000230418 CLSPNQ9HAW4 1339 aa20.15■□□□□ 0.82
PTK7-201ENST00000230418 TOPBP1Q92547 1522 aa20.13■□□□□ 0.81
PTK7-201ENST00000230418 ERICH3Q5RHP9 1530 aa20.12■□□□□ 0.81
PTK7-201ENST00000230418 SENP3-EIF4A1A0A087X0R7 540 aa20.12■□□□□ 0.81
PTK7-201ENST00000230418 FAM9BQ8IZU0 186 aa20.07■□□□□ 0.8
PTK7-201ENST00000230418 HNRNPUQ00839 825 aaKnown RBP eCLIP20.06■□□□□ 0.8
PTK7-201ENST00000230418 RGL3Q3MIN7 710 aa20.05■□□□□ 0.8
PTK7-201ENST00000230418 JPH4Q96JJ6 628 aa20.03■□□□□ 0.8
PTK7-201ENST00000230418 EIF4G2P78344 907 aaKnown RBP eCLIP20.02■□□□□ 0.8
PTK7-201ENST00000230418 FKBP8Q14318 412 aa20.01■□□□□ 0.79
PTK7-201ENST00000230418 LRRC9Q6ZRR7 1453 aa20■□□□□ 0.79
PTK7-201ENST00000230418 SENP3Q9H4L4 574 aaPredicted RBP20■□□□□ 0.79
PTK7-201ENST00000230418 ZNF644Q9H582 1327 aaPredicted RBP19.98■□□□□ 0.79
PTK7-201ENST00000230418 CHGAP10645 457 aaKnown RBP19.96■□□□□ 0.79
PTK7-201ENST00000230418 ERICH6Q7L0X2 663 aa19.95■□□□□ 0.78
PTK7-201ENST00000230418 BIVM-ERCC5R4GMW8 1640 aa19.95■□□□□ 0.78
PTK7-201ENST00000230418 SALL2Q9Y467 1007 aaPredicted RBP19.95■□□□□ 0.78
PTK7-201ENST00000230418 PPP1R15AO75807 674 aaPredicted RBP19.94■□□□□ 0.78
PTK7-201ENST00000230418 MPHOSPH9Q99550 1183 aa19.94■□□□□ 0.78
PTK7-201ENST00000230418 DNMBPQ6XZF7 1577 aa19.93■□□□□ 0.78
PTK7-201ENST00000230418 IRX6P78412 446 aaPredicted RBP19.93■□□□□ 0.78
PTK7-201ENST00000230418 MRS2Q9HD23 443 aa19.9■□□□□ 0.78
PTK7-201ENST00000230418 URB2Q14146 1524 aaKnown RBP19.9■□□□□ 0.78
PTK7-201ENST00000230418 NPM1P06748 294 aaKnown RBP eCLIP19.89■□□□□ 0.77
PTK7-201ENST00000230418 RRBP1Q9P2E9 1410 aaKnown RBP19.89■□□□□ 0.77
PTK7-201ENST00000230418 HNRNPMP52272 730 aaKnown RBP eCLIP19.89■□□□□ 0.771e-6■■□□□ 14.4
PTK7-201ENST00000230418 PKD2Q13563 968 aa19.87■□□□□ 0.77
PTK7-201ENST00000230418 FGD6Q6ZV73 1430 aa19.87■□□□□ 0.77
PTK7-201ENST00000230418 ABCA10Q8WWZ4 1543 aa19.87■□□□□ 0.77
PTK7-201ENST00000230418 CARMIL2Q6F5E8 1435 aa19.87■□□□□ 0.77
PTK7-201ENST00000230418 CASKIN1Q8WXD9 1431 aa19.86■□□□□ 0.77
PTK7-201ENST00000230418 HSPA5P11021 654 aaKnown RBP19.86■□□□□ 0.77
PTK7-201ENST00000230418 L3MBTL2Q969R5 705 aa19.86■□□□□ 0.77
PTK7-201ENST00000230418 TIAM1Q13009 1591 aa19.81■□□□□ 0.76
PTK7-201ENST00000230418 CCDC18Q5T9S5 1454 aa19.8■□□□□ 0.76
PTK7-201ENST00000230418 NCOA2Q15596 1464 aa19.8■□□□□ 0.76
PTK7-201ENST00000230418 DCAF11Q8TEB1 546 aa19.79■□□□□ 0.76
PTK7-201ENST00000230418 CARD11Q9BXL7 1154 aa19.79■□□□□ 0.76
PTK7-201ENST00000230418 GRIN2BQ13224 1484 aa19.79■□□□□ 0.76
PTK7-201ENST00000230418 TIMELESSQ9UNS1 1208 aa19.78■□□□□ 0.76
PTK7-201ENST00000230418 MRC2Q9UBG0 1479 aa19.77■□□□□ 0.76
PTK7-201ENST00000230418 MYOM3Q5VTT5 1437 aa19.77■□□□□ 0.76
PTK7-201ENST00000230418 TMC1Q8TDI8 760 aa19.76■□□□□ 0.75
PTK7-201ENST00000230418 FYCO1Q9BQS8 1478 aa19.76■□□□□ 0.75
PTK7-201ENST00000230418 PCF11O94913 1555 aaKnown RBP19.75■□□□□ 0.75
PTK7-201ENST00000230418 LAMC3Q9Y6N6 1575 aa19.75■□□□□ 0.75
PTK7-201ENST00000230418 NUP155O75694 1391 aa19.75■□□□□ 0.75
PTK7-201ENST00000230418 ZNF608Q9ULD9 1512 aaPredicted RBP19.74■□□□□ 0.75
PTK7-201ENST00000230418 PRDM2Q13029 1718 aa19.72■□□□□ 0.75
PTK7-201ENST00000230418 PLPPR3Q6T4P5 718 aa19.7■□□□□ 0.74
PTK7-201ENST00000230418 SNAPC4Q5SXM2 1469 aa19.7■□□□□ 0.74
PTK7-201ENST00000230418 PTPRGP23470 1445 aa19.68■□□□□ 0.74
PTK7-201ENST00000230418 CDK13Q14004 1512 aaKnown RBP19.68■□□□□ 0.74
PTK7-201ENST00000230418 SUPT16HQ9Y5B9 1047 aaKnown RBP19.67■□□□□ 0.74
PTK7-201ENST00000230418 EFCAB5A4FU69 1503 aa19.66■□□□□ 0.74
PTK7-201ENST00000230418 ANKRD30AQ9BXX3 1397 aa19.65■□□□□ 0.74
PTK7-201ENST00000230418 PRG4Q92954 1404 aaPredicted RBP19.64■□□□□ 0.73
PTK7-201ENST00000230418 IFT140Q96RY7 1462 aa19.62■□□□□ 0.73
PTK7-201ENST00000230418 UACAQ9BZF9 1416 aa19.59■□□□□ 0.73
PTK7-201ENST00000230418 EFCAB2Q5VUJ9 269 aa19.55■□□□□ 0.72
PTK7-201ENST00000230418 STAG3Q9UJ98 1225 aa19.55■□□□□ 0.72
PTK7-201ENST00000230418 CUL7Q14999 1698 aa19.54■□□□□ 0.72
PTK7-201ENST00000230418 CC2D1BQ5T0F9 858 aaKnown RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms