RNA–Protein interactions for RNA: ENST00000229340.9

RAB35-201, Transcript of RAB35, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB35, Length 2,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB35-201ENST00000229340 ARAP1Q96P48 1450 aa23.56■■□□□ 1.36
RAB35-201ENST00000229340 CCER2I3L3R5 266 aa23.55■■□□□ 1.36
RAB35-201ENST00000229340 HNRNPUQ00839 825 aaKnown RBP eCLIP23.53■■□□□ 1.36
RAB35-201ENST00000229340 NBR1Q14596 966 aa23.52■■□□□ 1.36
RAB35-201ENST00000229340 CUX2O14529 1486 aa23.51■■□□□ 1.35
RAB35-201ENST00000229340 ANO8Q9HCE9 1232 aaPredicted RBP23.49■■□□□ 1.35
RAB35-201ENST00000229340 B4GALNT3Q6L9W6 998 aa23.39■■□□□ 1.33
RAB35-201ENST00000229340 MYT1LQ9UL68 1186 aa23.38■■□□□ 1.33
RAB35-201ENST00000229340 FAM50AQ14320 339 aaKnown RBP23.37■■□□□ 1.33
RAB35-201ENST00000229340 PAK3O75914 559 aaPredicted RBP23.37■■□□□ 1.33
RAB35-201ENST00000229340 SETD5Q9C0A6 1442 aa23.36■■□□□ 1.33
RAB35-201ENST00000229340 PPP4R2Q9NY27 417 aa23.31■■□□□ 1.32
RAB35-201ENST00000229340 NOP58Q9Y2X3 529 aaKnown RBP23.31■■□□□ 1.32
RAB35-201ENST00000229340 SALL2Q9Y467 1007 aaPredicted RBP23.29■■□□□ 1.32
RAB35-201ENST00000229340 PRXQ9BXM0 1461 aa23.26■■□□□ 1.31
RAB35-201ENST00000229340 CCDC136Q96JN2 1154 aa23.23■■□□□ 1.31
RAB35-201ENST00000229340 RTN4Q9NQC3 1192 aaKnown RBP23.22■■□□□ 1.31
RAB35-201ENST00000229340 ERICH3Q5RHP9 1530 aa23.21■■□□□ 1.31
RAB35-201ENST00000229340 ARHGAP35Q9NRY4 1499 aa23.2■■□□□ 1.3
RAB35-201ENST00000229340 CCDC184Q52MB2 194 aa23.2■■□□□ 1.3
RAB35-201ENST00000229340 SLC24A1O60721 1099 aa23.18■■□□□ 1.3
RAB35-201ENST00000229340 PHLDB1Q86UU1 1377 aa23.17■■□□□ 1.3
RAB35-201ENST00000229340 IL27Q8NEV9 243 aa23.17■■□□□ 1.3
RAB35-201ENST00000229340 TONSLQ96HA7 1378 aa23.16■■□□□ 1.3
RAB35-201ENST00000229340 ATP1B4Q9UN42 357 aaPredicted RBP23.15■■□□□ 1.3
RAB35-201ENST00000229340 TIMELESSQ9UNS1 1208 aa23.15■■□□□ 1.3
RAB35-201ENST00000229340 FAM9BQ8IZU0 186 aa23.15■■□□□ 1.3
RAB35-201ENST00000229340 TOP2BQ02880 1626 aa23.14■■□□□ 1.29
RAB35-201ENST00000229340 RTL5Q5HYW3 569 aaPredicted RBP23.11■■□□□ 1.29
RAB35-201ENST00000229340 ERICH6BQ5W0A0 696 aa23.11■■□□□ 1.29
RAB35-201ENST00000229340 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.08■■□□□ 1.28
RAB35-201ENST00000229340 TIAM1Q13009 1591 aa23.05■■□□□ 1.28
RAB35-201ENST00000229340 P3H3Q8IVL6 736 aa23.03■■□□□ 1.28
RAB35-201ENST00000229340 WASHC2AQ641Q2 1341 aa23.03■■□□□ 1.28
RAB35-201ENST00000229340 ANP32AP39687 249 aaKnown RBP23.02■■□□□ 1.28
RAB35-201ENST00000229340 ZBTB47Q9UFB7 747 aaPredicted RBP23.01■■□□□ 1.27
RAB35-201ENST00000229340 LRRC9Q6ZRR7 1453 aa23.01■■□□□ 1.27
RAB35-201ENST00000229340 SENP3-EIF4A1A0A087X0R7 540 aa23.01■■□□□ 1.27
RAB35-201ENST00000229340 IPO9Q96P70 1041 aaKnown RBP23■■□□□ 1.27
RAB35-201ENST00000229340 MRS2Q9HD23 443 aa22.98■■□□□ 1.27
RAB35-201ENST00000229340 HSPA5P11021 654 aaKnown RBP22.98■■□□□ 1.27
RAB35-201ENST00000229340 CNGB1Q14028 1251 aaPredicted RBP22.98■■□□□ 1.27
RAB35-201ENST00000229340 KIF27Q86VH2 1401 aa22.97■■□□□ 1.27
RAB35-201ENST00000229340 BIVM-ERCC5R4GMW8 1640 aa22.95■■□□□ 1.26
RAB35-201ENST00000229340 PEG3Q9GZU2 1588 aa22.94■■□□□ 1.26
RAB35-201ENST00000229340 NPM2Q86SE8 214 aaKnown RBP22.93■■□□□ 1.26
RAB35-201ENST00000229340 ATAD2BQ9ULI0 1458 aa22.92■■□□□ 1.26
RAB35-201ENST00000229340 AKNAQ7Z591 1439 aa22.91■■□□□ 1.26
RAB35-201ENST00000229340 LAS1LQ9Y4W2 734 aaKnown RBP22.9■■□□□ 1.26
RAB35-201ENST00000229340 ZBED9Q6R2W3 1325 aa22.89■■□□□ 1.26
RAB35-201ENST00000229340 PRKRIP1Q9H875 184 aaPredicted RBP22.88■■□□□ 1.25
RAB35-201ENST00000229340 FHAD1B1AJZ9 1412 aa22.86■■□□□ 1.25
RAB35-201ENST00000229340 C11orf95C9JLR9 678 aaPredicted RBP22.86■■□□□ 1.25
RAB35-201ENST00000229340 CUX1P39880 1505 aa22.85■■□□□ 1.25
RAB35-201ENST00000229340 CCDC18Q5T9S5 1454 aa22.84■■□□□ 1.25
RAB35-201ENST00000229340 DNAJC5BQ9UF47 199 aa22.83■■□□□ 1.24
RAB35-201ENST00000229340 NEFMP07197 916 aa22.81■■□□□ 1.24
RAB35-201ENST00000229340 MAP3K1Q13233 1512 aa22.81■■□□□ 1.24
RAB35-201ENST00000229340 CNTLNQ9NXG0 1405 aa22.8■■□□□ 1.24
RAB35-201ENST00000229340 EIF4G2P78344 907 aaKnown RBP eCLIP22.8■■□□□ 1.24
RAB35-201ENST00000229340 AQRO60306 1485 aaKnown RBP eCLIP22.77■■□□□ 1.241e-7■■□□□ 12.1
RAB35-201ENST00000229340 KDM5BQ9UGL1 1544 aa22.76■■□□□ 1.23
RAB35-201ENST00000229340 UACAQ9BZF9 1416 aa22.75■■□□□ 1.23
RAB35-201ENST00000229340 PCF11O94913 1555 aaKnown RBP22.74■■□□□ 1.23
RAB35-201ENST00000229340 PTPRKQ15262 1439 aa22.74■■□□□ 1.23
RAB35-201ENST00000229340 BRPF3Q9ULD4 1205 aa22.71■■□□□ 1.23
RAB35-201ENST00000229340 IGF1RP08069 1367 aa22.7■■□□□ 1.23
RAB35-201ENST00000229340 NCOA2Q15596 1464 aa22.7■■□□□ 1.22
RAB35-201ENST00000229340 CC2D2AQ9P2K1 1620 aa22.69■■□□□ 1.22
RAB35-201ENST00000229340 EIF5BO60841 1220 aaKnown RBP22.69■■□□□ 1.22
RAB35-201ENST00000229340 CCDC7Q96M83 1385 aa22.69■■□□□ 1.22
RAB35-201ENST00000229340 NUDCQ9Y266 331 aa22.68■■□□□ 1.22
RAB35-201ENST00000229340 FHOD3Q2V2M9 1422 aa22.68■■□□□ 1.22
RAB35-201ENST00000229340 CFAP43Q8NDM7 1665 aa22.68■■□□□ 1.22
RAB35-201ENST00000229340 RRP7BPQ9NSQ0 103 aa22.67■■□□□ 1.22
RAB35-201ENST00000229340 POLR3GLQ9BT43 218 aa22.66■■□□□ 1.22
RAB35-201ENST00000229340 FGD6Q6ZV73 1430 aa22.66■■□□□ 1.22
RAB35-201ENST00000229340 CARMIL1Q5VZK9 1371 aa22.66■■□□□ 1.22
RAB35-201ENST00000229340 CHIC2Q9UKJ5 165 aa22.65■■□□□ 1.22
RAB35-201ENST00000229340 SMG6Q86US8 1419 aaKnown RBP22.65■■□□□ 1.22
RAB35-201ENST00000229340 FOXD1Q16676 465 aa22.65■■□□□ 1.22
RAB35-201ENST00000229340 PTPN23Q9H3S7 1636 aa22.64■■□□□ 1.22
RAB35-201ENST00000229340 HFM1A2PYH4 1435 aa22.64■■□□□ 1.21
RAB35-201ENST00000229340 L3MBTL2Q969R5 705 aa22.63■■□□□ 1.21
RAB35-201ENST00000229340 NAIPQ13075 1403 aa22.62■■□□□ 1.21
RAB35-201ENST00000229340 UBE2Q2Q8WVN8 375 aa22.61■■□□□ 1.21
RAB35-201ENST00000229340 NCAPD3P42695 1498 aa22.6■■□□□ 1.21
RAB35-201ENST00000229340 NCOA1Q15788 1441 aa22.59■■□□□ 1.21
RAB35-201ENST00000229340 PDE4AP27815 886 aa22.58■■□□□ 1.21
RAB35-201ENST00000229340 KIF7Q2M1P5 1343 aa22.58■■□□□ 1.21
RAB35-201ENST00000229340 RNF123Q5XPI4 1314 aa22.58■■□□□ 1.21
RAB35-201ENST00000229340 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.58■■□□□ 1.24e-6■■■□□ 16.3
RAB35-201ENST00000229340 WASHC2CQ9Y4E1 1318 aa22.57■■□□□ 1.2
RAB35-201ENST00000229340 EXOC6Q8TAG9 804 aa22.56■■□□□ 1.2
RAB35-201ENST00000229340 SKAP1Q86WV1 359 aa22.54■■□□□ 1.2
RAB35-201ENST00000229340 USP35Q9P2H5 1018 aa22.54■■□□□ 1.2
RAB35-201ENST00000229340 MTUS2Q5JR59 1369 aa22.54■■□□□ 1.2
RAB35-201ENST00000229340 NBPF8Q3BBV2 869 aa22.54■■□□□ 1.2
RAB35-201ENST00000229340 FMN1Q68DA7 1419 aa22.54■■□□□ 1.2
RAB35-201ENST00000229340 SLC4A3P48751 1232 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms