RNA–Protein interactions for RNA: ENST00000229340.9

RAB35-201, Transcript of RAB35, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB35, Length 2,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB35-201ENST00000229340 NISCHQ9Y2I1 1504 aa31.43■■■□□ 2.62
RAB35-201ENST00000229340 HRCP23327 699 aa28.56■■■□□ 2.16
RAB35-201ENST00000229340 SHROOM4Q9ULL8 1493 aa28.34■■■□□ 2.13
RAB35-201ENST00000229340 SUPT5HO00267 1087 aaKnown RBP28.25■■■□□ 2.11
RAB35-201ENST00000229340 PPARGC1BQ86YN6 1023 aaKnown RBP28.23■■■□□ 2.11
RAB35-201ENST00000229340 PCGF6Q9BYE7 350 aa28.13■■■□□ 2.09
RAB35-201ENST00000229340 MYO15BQ96JP2 1530 aa27.88■■■□□ 2.05
RAB35-201ENST00000229340 CHIC1Q5VXU3 224 aa27.64■■■□□ 2.02
RAB35-201ENST00000229340 PELP1Q8IZL8 1130 aaKnown RBP27.44■■□□□ 1.98
RAB35-201ENST00000229340 LOC105371045A0A1W2PR82 267 aa27.2■■□□□ 1.94
RAB35-201ENST00000229340 SCAF1Q9H7N4 1312 aaKnown RBP27.16■■□□□ 1.94
RAB35-201ENST00000229340 DCAF1Q9Y4B6 1507 aa27.06■■□□□ 1.92
RAB35-201ENST00000229340 TRIM26Q12899 539 aaPredicted RBP27■■□□□ 1.91
RAB35-201ENST00000229340 CCDC180Q9P1Z9 1646 aa26.75■■□□□ 1.87
RAB35-201ENST00000229340 ZCCHC6Q5VYS8 1495 aaKnown RBP26.72■■□□□ 1.87
RAB35-201ENST00000229340 ZEB1P37275 1124 aaPredicted RBP26.68■■□□□ 1.86
RAB35-201ENST00000229340 DCAF8L2P0C7V8 631 aa26.66■■□□□ 1.86
RAB35-201ENST00000229340 NEUROD1Q13562 356 aa26.41■■□□□ 1.82
RAB35-201ENST00000229340 ACIN1Q9UKV3 1341 aaKnown RBP26.39■■□□□ 1.81
RAB35-201ENST00000229340 MYT1Q01538 1121 aa26.28■■□□□ 1.8
RAB35-201ENST00000229340 GTF3C3Q9Y5Q9 886 aa26.28■■□□□ 1.8
RAB35-201ENST00000229340 EHMT2Q96KQ7 1210 aa26.27■■□□□ 1.8
RAB35-201ENST00000229340 FAM9AQ8IZU1 332 aaPredicted RBP26.21■■□□□ 1.79
RAB35-201ENST00000229340 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.06■■□□□ 1.76
RAB35-201ENST00000229340 CENPBP07199 599 aaPredicted RBP26■■□□□ 1.75
RAB35-201ENST00000229340 TRIM41Q8WV44 630 aa25.98■■□□□ 1.75
RAB35-201ENST00000229340 DIEXFQ68CQ4 756 aaKnown RBP25.95■■□□□ 1.75
RAB35-201ENST00000229340 CCER1Q8TC90 406 aaPredicted RBP25.94■■□□□ 1.74
RAB35-201ENST00000229340 YTHDC1Q96MU7 727 aaKnown RBP25.75■■□□□ 1.71
RAB35-201ENST00000229340 TTBK1Q5TCY1 1321 aaPredicted RBP25.63■■□□□ 1.69
RAB35-201ENST00000229340 ABCC9O60706 1549 aa25.43■■□□□ 1.66
RAB35-201ENST00000229340 RSF1Q96T23 1441 aaPredicted RBP25.42■■□□□ 1.66
RAB35-201ENST00000229340 RB1CC1Q8TDY2 1594 aa25.4■■□□□ 1.66
RAB35-201ENST00000229340 ZNF316A6NFI3 1004 aaPredicted RBP25.37■■□□□ 1.65
RAB35-201ENST00000229340 MIER1Q8N108 512 aa25.33■■□□□ 1.65
RAB35-201ENST00000229340 SCRIBQ14160 1630 aa25.05■■□□□ 1.6
RAB35-201ENST00000229340 BCL11AQ9H165 835 aa24.94■■□□□ 1.58
RAB35-201ENST00000229340 SUPT16HQ9Y5B9 1047 aaKnown RBP24.93■■□□□ 1.58
RAB35-201ENST00000229340 HNRNPUL2Q1KMD3 747 aaKnown RBP24.9■■□□□ 1.58
RAB35-201ENST00000229340 ANP32EQ9BTT0 268 aa24.88■■□□□ 1.57
RAB35-201ENST00000229340 TSHZ2Q9NRE2 1034 aa24.85■■□□□ 1.57
RAB35-201ENST00000229340 CEP162Q5TB80 1403 aa24.84■■□□□ 1.57
RAB35-201ENST00000229340 WRNQ14191 1432 aaPredicted RBP eCLIP24.82■■□□□ 1.56
RAB35-201ENST00000229340 CECR2Q9BXF3 1484 aa24.77■■□□□ 1.56
RAB35-201ENST00000229340 CSRNP3Q8WYN3 585 aa24.73■■□□□ 1.55
RAB35-201ENST00000229340 UBTFP17480 764 aaKnown RBP24.71■■□□□ 1.55
RAB35-201ENST00000229340 MROH2BQ7Z745 1585 aa24.68■■□□□ 1.54
RAB35-201ENST00000229340 WIZO95785 1651 aa24.64■■□□□ 1.53
RAB35-201ENST00000229340 CCDC88BA6NC98 1476 aa24.62■■□□□ 1.53
RAB35-201ENST00000229340 BCANQ96GW7 911 aa24.61■■□□□ 1.53
RAB35-201ENST00000229340 ABCC8Q09428 1581 aa24.6■■□□□ 1.53
RAB35-201ENST00000229340 SOGA1O94964 1423 aa24.57■■□□□ 1.52
RAB35-201ENST00000229340 TNIKQ9UKE5 1360 aa24.56■■□□□ 1.52
RAB35-201ENST00000229340 CLSPNQ9HAW4 1339 aa24.55■■□□□ 1.52
RAB35-201ENST00000229340 RUSC2Q8N2Y8 1516 aa24.46■■□□□ 1.51
RAB35-201ENST00000229340 EIF4G1Q04637 1599 aaKnown RBP24.44■■□□□ 1.5
RAB35-201ENST00000229340 KCNH8Q96L42 1107 aa24.43■■□□□ 1.5
RAB35-201ENST00000229340 RANGAP1P46060 587 aaPredicted RBP24.36■■□□□ 1.49
RAB35-201ENST00000229340 FKBP8Q14318 412 aa24.34■■□□□ 1.49
RAB35-201ENST00000229340 BAZ1AQ9NRL2 1556 aaPredicted RBP24.28■■□□□ 1.48
RAB35-201ENST00000229340 NACADO15069 1562 aa24.27■■□□□ 1.48
RAB35-201ENST00000229340 RBM19Q9Y4C8 960 aaKnown RBP24.26■■□□□ 1.47
RAB35-201ENST00000229340 APLP2Q06481 763 aa24.26■■□□□ 1.47
RAB35-201ENST00000229340 GOLGA3Q08378 1498 aa24.25■■□□□ 1.47
RAB35-201ENST00000229340 PABPN1Q86U42 306 aaKnown RBP eCLIP24.23■■□□□ 1.47
RAB35-201ENST00000229340 ITGAEP38570 1179 aa24.21■■□□□ 1.47
RAB35-201ENST00000229340 DHX57Q6P158 1386 aaKnown RBP24.19■■□□□ 1.46
RAB35-201ENST00000229340 CLIP1P30622 1438 aa24.15■■□□□ 1.46
RAB35-201ENST00000229340 EEA1Q15075 1411 aa24.13■■□□□ 1.45
RAB35-201ENST00000229340 MSH5O43196 834 aa24.09■■□□□ 1.45
RAB35-201ENST00000229340 VPS8Q8N3P4 1428 aa24.07■■□□□ 1.44
RAB35-201ENST00000229340 NEFLP07196 543 aa24.04■■□□□ 1.44
RAB35-201ENST00000229340 TRIM52Q96A61 297 aa24■■□□□ 1.43
RAB35-201ENST00000229340 DDX10Q13206 875 aaKnown RBP23.99■■□□□ 1.43
RAB35-201ENST00000229340 SMARCA2P51531 1590 aa23.99■■□□□ 1.43
RAB35-201ENST00000229340 TOP2AP11388 1531 aaKnown RBP23.98■■□□□ 1.43
RAB35-201ENST00000229340 CEP164Q9UPV0 1460 aa23.96■■□□□ 1.43
RAB35-201ENST00000229340 KANK4Q5T7N3 995 aaPredicted RBP23.89■■□□□ 1.41
RAB35-201ENST00000229340 PRKCSHP14314 528 aaPredicted RBP23.87■■□□□ 1.41
RAB35-201ENST00000229340 ERICH6Q7L0X2 663 aa23.87■■□□□ 1.41
RAB35-201ENST00000229340 HIRIP3Q9BW71 556 aaPredicted RBP23.86■■□□□ 1.41
RAB35-201ENST00000229340 RAPGEF2Q9Y4G8 1499 aa23.85■■□□□ 1.41
RAB35-201ENST00000229340 KIF21BO75037 1637 aa23.83■■□□□ 1.41
RAB35-201ENST00000229340 IRX6P78412 446 aaPredicted RBP23.81■■□□□ 1.4
RAB35-201ENST00000229340 UNC13AQ9UPW8 1703 aa23.77■■□□□ 1.4
RAB35-201ENST00000229340 SMARCA4P51532 1647 aa23.72■■□□□ 1.39
RAB35-201ENST00000229340 SYNJ1O43426 1573 aa23.72■■□□□ 1.39
RAB35-201ENST00000229340 SIN3AQ96ST3 1273 aa23.7■■□□□ 1.38
RAB35-201ENST00000229340 FANCIQ9NVI1 1328 aa23.68■■□□□ 1.38
RAB35-201ENST00000229340 CDK11AQ9UQ88 783 aaPredicted RBP23.67■■□□□ 1.38
RAB35-201ENST00000229340 PPP1R15AO75807 674 aaPredicted RBP23.66■■□□□ 1.38
RAB35-201ENST00000229340 DEKP35659 375 aaKnown RBP23.66■■□□□ 1.38
RAB35-201ENST00000229340 BAZ1BQ9UIG0 1483 aaKnown RBP23.66■■□□□ 1.38
RAB35-201ENST00000229340 WDR97A6NE52 1622 aa23.64■■□□□ 1.37
RAB35-201ENST00000229340 ANP32CO43423 234 aa23.63■■□□□ 1.37
RAB35-201ENST00000229340 RAB3GAP2Q9H2M9 1393 aa23.61■■□□□ 1.37
RAB35-201ENST00000229340 CCNB3Q8WWL7 1395 aa23.59■■□□□ 1.37
RAB35-201ENST00000229340 RRBP1Q9P2E9 1410 aaKnown RBP23.59■■□□□ 1.37
RAB35-201ENST00000229340 MAPKBP1O60336 1514 aa23.59■■□□□ 1.37
RAB35-201ENST00000229340 BICRAQ9NZM4 1560 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms