RNA–Protein interactions for RNA: ENST00000228468.8

ASIC1-201, Transcript of acid sensing ion channel subunit 1, humanhuman

TSL 1 (best) BASIC

Gene ASIC1, Length 4,072 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1-201ENST00000228468 KIF21BO75037 1637 aa22.49■■□□□ 1.19
ASIC1-201ENST00000228468 HNRNPUQ00839 825 aaKnown RBP eCLIP22.49■■□□□ 1.19
ASIC1-201ENST00000228468 CDK11AQ9UQ88 783 aaPredicted RBP22.46■■□□□ 1.19
ASIC1-201ENST00000228468 FHAD1B1AJZ9 1412 aa22.44■■□□□ 1.18
ASIC1-201ENST00000228468 FHOD3Q2V2M9 1422 aa22.44■■□□□ 1.18
ASIC1-201ENST00000228468 IGF1RP08069 1367 aa22.43■■□□□ 1.18
ASIC1-201ENST00000228468 FAM9BQ8IZU0 186 aa22.42■■□□□ 1.18
ASIC1-201ENST00000228468 SETD5Q9C0A6 1442 aa22.42■■□□□ 1.18
ASIC1-201ENST00000228468 IRX6P78412 446 aaPredicted RBP22.38■■□□□ 1.17
ASIC1-201ENST00000228468 NCAPD3P42695 1498 aa22.38■■□□□ 1.17
ASIC1-201ENST00000228468 ARAP1Q96P48 1450 aa22.38■■□□□ 1.17
ASIC1-201ENST00000228468 KCNH8Q96L42 1107 aa22.38■■□□□ 1.17
ASIC1-201ENST00000228468 CHMP7Q8WUX9 453 aaPredicted RBP22.37■■□□□ 1.17
ASIC1-201ENST00000228468 UNC13AQ9UPW8 1703 aa22.37■■□□□ 1.17
ASIC1-201ENST00000228468 MYT1Q01538 1121 aa22.36■■□□□ 1.17
ASIC1-201ENST00000228468 EIF4G1Q04637 1599 aaKnown RBP22.36■■□□□ 1.17
ASIC1-201ENST00000228468 SENP3-EIF4A1A0A087X0R7 540 aa22.35■■□□□ 1.17
ASIC1-201ENST00000228468 SLC4A1APQ9BWU0 796 aaKnown RBP22.33■■□□□ 1.17
ASIC1-201ENST00000228468 FOXD1Q16676 465 aa22.31■■□□□ 1.16
ASIC1-201ENST00000228468 FGD5Q6ZNL6 1462 aa22.3■■□□□ 1.16
ASIC1-201ENST00000228468 SUPT16HQ9Y5B9 1047 aaKnown RBP22.3■■□□□ 1.16
ASIC1-201ENST00000228468 RAD54L2Q9Y4B4 1467 aa22.29■■□□□ 1.16
ASIC1-201ENST00000228468 ARHGAP35Q9NRY4 1499 aa22.29■■□□□ 1.16
ASIC1-201ENST00000228468 KDM2AQ9Y2K7 1162 aa22.28■■□□□ 1.16
ASIC1-201ENST00000228468 PRXQ9BXM0 1461 aa22.28■■□□□ 1.16
ASIC1-201ENST00000228468 FANCD2Q9BXW9 1451 aa22.28■■□□□ 1.16
ASIC1-201ENST00000228468 EIF4G2P78344 907 aaKnown RBP eCLIP22.28■■□□□ 1.16
ASIC1-201ENST00000228468 CUX1P39880 1505 aa22.26■■□□□ 1.15
ASIC1-201ENST00000228468 TOP2BQ02880 1626 aa22.24■■□□□ 1.15
ASIC1-201ENST00000228468 MRS2Q9HD23 443 aa22.24■■□□□ 1.15
ASIC1-201ENST00000228468 CFTRP13569 1480 aa22.23■■□□□ 1.15
ASIC1-201ENST00000228468 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.21■■□□□ 1.15
ASIC1-201ENST00000228468 PHLDB1Q86UU1 1377 aa22.21■■□□□ 1.15
ASIC1-201ENST00000228468 PPP1R15AO75807 674 aaPredicted RBP22.21■■□□□ 1.15
ASIC1-201ENST00000228468 SALL2Q9Y467 1007 aaPredicted RBP22.2■■□□□ 1.14
ASIC1-201ENST00000228468 CFDP1Q9UEE9 299 aaPredicted RBP22.19■■□□□ 1.14
ASIC1-201ENST00000228468 TSPY4P0CV99 314 aa22.15■■□□□ 1.14
ASIC1-201ENST00000228468 TSPY10P0CW01 314 aa22.15■■□□□ 1.14
ASIC1-201ENST00000228468 FMN1Q68DA7 1419 aa22.14■■□□□ 1.13
ASIC1-201ENST00000228468 ERICH3Q5RHP9 1530 aa22.13■■□□□ 1.13
ASIC1-201ENST00000228468 NESP48681 1621 aa22.1■■□□□ 1.13
ASIC1-201ENST00000228468 PEG3Q9GZU2 1588 aa22.1■■□□□ 1.13
ASIC1-201ENST00000228468 PDS5BQ9NTI5 1447 aa22.1■■□□□ 1.13
ASIC1-201ENST00000228468 TIMELESSQ9UNS1 1208 aa22.09■■□□□ 1.13
ASIC1-201ENST00000228468 PLEKHD1A6NEE1 506 aa22.09■■□□□ 1.13
ASIC1-201ENST00000228468 HSPA5P11021 654 aaKnown RBP22.08■■□□□ 1.13
ASIC1-201ENST00000228468 RGL3Q3MIN7 710 aa22.06■■□□□ 1.12
ASIC1-201ENST00000228468 DNAJC5BQ9UF47 199 aa22.06■■□□□ 1.12
ASIC1-201ENST00000228468 RRBP1Q9P2E9 1410 aaKnown RBP22.05■■□□□ 1.12
ASIC1-201ENST00000228468 LRRC9Q6ZRR7 1453 aa22.05■■□□□ 1.12
ASIC1-201ENST00000228468 MPHOSPH9Q99550 1183 aa22.04■■□□□ 1.12
ASIC1-201ENST00000228468 TMC1Q8TDI8 760 aa22.03■■□□□ 1.12
ASIC1-201ENST00000228468 HMGXB3Q12766 1538 aa22.02■■□□□ 1.12
ASIC1-201ENST00000228468 L3MBTL2Q969R5 705 aa21.99■■□□□ 1.11
ASIC1-201ENST00000228468 ERCC6Q03468 1493 aa21.95■■□□□ 1.1
ASIC1-201ENST00000228468 CCER2I3L3R5 266 aa21.93■■□□□ 1.1
ASIC1-201ENST00000228468 GAPVD1Q14C86 1478 aa21.93■■□□□ 1.1
ASIC1-201ENST00000228468 CARD11Q9BXL7 1154 aa21.91■■□□□ 1.1
ASIC1-201ENST00000228468 FGD6Q6ZV73 1430 aa21.9■■□□□ 1.1
ASIC1-201ENST00000228468 CCDC18Q5T9S5 1454 aa21.9■■□□□ 1.1
ASIC1-201ENST00000228468 PKD2Q13563 968 aa21.89■■□□□ 1.1
ASIC1-201ENST00000228468 ZNF644Q9H582 1327 aaPredicted RBP21.89■■□□□ 1.09
ASIC1-201ENST00000228468 CC2D2AQ9P2K1 1620 aa21.88■■□□□ 1.09
ASIC1-201ENST00000228468 POLA1P09884 1462 aaPredicted RBP21.88■■□□□ 1.09
ASIC1-201ENST00000228468 AQRO60306 1485 aaKnown RBP eCLIP21.87■■□□□ 1.09
ASIC1-201ENST00000228468 CHGAP10645 457 aaKnown RBP21.85■■□□□ 1.09
ASIC1-201ENST00000228468 TOPBP1Q92547 1522 aa21.84■■□□□ 1.09
ASIC1-201ENST00000228468 DCAF11Q8TEB1 546 aa21.84■■□□□ 1.09
ASIC1-201ENST00000228468 CCDC136Q96JN2 1154 aa21.83■■□□□ 1.09
ASIC1-201ENST00000228468 CASKIN1Q8WXD9 1431 aa21.82■■□□□ 1.08
ASIC1-201ENST00000228468 TIAM1Q13009 1591 aa21.82■■□□□ 1.08
ASIC1-201ENST00000228468 TSHZ2Q9NRE2 1034 aa21.82■■□□□ 1.08
ASIC1-201ENST00000228468 NPM2Q86SE8 214 aaKnown RBP21.81■■□□□ 1.08
ASIC1-201ENST00000228468 SENP3Q9H4L4 574 aaPredicted RBP21.8■■□□□ 1.08
ASIC1-201ENST00000228468 B4GALNT3Q6L9W6 998 aa21.8■■□□□ 1.08
ASIC1-201ENST00000228468 DAXXQ9UER7 740 aaPredicted RBP21.8■■□□□ 1.08
ASIC1-201ENST00000228468 BIVM-ERCC5R4GMW8 1640 aa21.79■■□□□ 1.08
ASIC1-201ENST00000228468 MYOM3Q5VTT5 1437 aa21.76■■□□□ 1.07
ASIC1-201ENST00000228468 NCOA2Q15596 1464 aa21.76■■□□□ 1.07
ASIC1-201ENST00000228468 JPH4Q96JJ6 628 aa21.76■■□□□ 1.07
ASIC1-201ENST00000228468 HNRNPMP52272 730 aaKnown RBP eCLIP21.75■■□□□ 1.07
ASIC1-201ENST00000228468 NUP155O75694 1391 aa21.72■■□□□ 1.07
ASIC1-201ENST00000228468 WDR97A6NE52 1622 aa21.72■■□□□ 1.07
ASIC1-201ENST00000228468 FYCO1Q9BQS8 1478 aa21.71■■□□□ 1.07
ASIC1-201ENST00000228468 UACAQ9BZF9 1416 aa21.7■■□□□ 1.06
ASIC1-201ENST00000228468 RTL5Q5HYW3 569 aaPredicted RBP21.69■■□□□ 1.06
ASIC1-201ENST00000228468 RBM19Q9Y4C8 960 aaKnown RBP21.68■■□□□ 1.06
ASIC1-201ENST00000228468 PCF11O94913 1555 aaKnown RBP21.68■■□□□ 1.06
ASIC1-201ENST00000228468 CC2D1BQ5T0F9 858 aaKnown RBP21.66■■□□□ 1.06
ASIC1-201ENST00000228468 ANP32AP39687 249 aaKnown RBP21.64■■□□□ 1.06
ASIC1-201ENST00000228468 PPP4R2Q9NY27 417 aa21.64■■□□□ 1.05
ASIC1-201ENST00000228468 WASHC2AQ641Q2 1341 aa21.63■■□□□ 1.05
ASIC1-201ENST00000228468 ABCA10Q8WWZ4 1543 aa21.63■■□□□ 1.05
ASIC1-201ENST00000228468 DNMBPQ6XZF7 1577 aa21.63■■□□□ 1.05
ASIC1-201ENST00000228468 CARMIL2Q6F5E8 1435 aa21.63■■□□□ 1.05
ASIC1-201ENST00000228468 PRKRIP1Q9H875 184 aaPredicted RBP21.62■■□□□ 1.05
ASIC1-201ENST00000228468 ANP32EQ9BTT0 268 aa21.61■■□□□ 1.05
ASIC1-201ENST00000228468 ANKRD30AQ9BXX3 1397 aa21.6■■□□□ 1.05
ASIC1-201ENST00000228468 NBR1Q14596 966 aa21.6■■□□□ 1.05
ASIC1-201ENST00000228468 CANXP27824 592 aaKnown RBP21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms