RNA–Protein interactions for RNA: ENST00000227868.8

PDHX-201, Transcript of pyruvate dehydrogenase complex component X, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDHX, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDHX-201ENST00000227868 GAPVD1Q14C86 1478 aa22.12■■□□□ 1.13
PDHX-201ENST00000227868 CUL7Q14999 1698 aa22.11■■□□□ 1.13
PDHX-201ENST00000227868 ITGAEP38570 1179 aa22.11■■□□□ 1.13
PDHX-201ENST00000227868 ATP1B4Q9UN42 357 aaPredicted RBP22.1■■□□□ 1.13
PDHX-201ENST00000227868 ZNF316A6NFI3 1004 aaPredicted RBP22.08■■□□□ 1.13
PDHX-201ENST00000227868 THOC2Q8NI27 1593 aaKnown RBP22.03■■□□□ 1.12
PDHX-201ENST00000227868 IFT140Q96RY7 1462 aa22.01■■□□□ 1.11
PDHX-201ENST00000227868 AQRO60306 1485 aaKnown RBP eCLIP21.99■■□□□ 1.11
PDHX-201ENST00000227868 CCNB3Q8WWL7 1395 aa21.96■■□□□ 1.11
PDHX-201ENST00000227868 PBRM1Q86U86 1689 aa21.96■■□□□ 1.11
PDHX-201ENST00000227868 RRBP1Q9P2E9 1410 aaKnown RBP21.95■■□□□ 1.1
PDHX-201ENST00000227868 ZNF608Q9ULD9 1512 aaPredicted RBP21.94■■□□□ 1.1
PDHX-201ENST00000227868 SCAF1Q9H7N4 1312 aaKnown RBP21.92■■□□□ 1.1
PDHX-201ENST00000227868 DHX57Q6P158 1386 aaKnown RBP21.92■■□□□ 1.1
PDHX-201ENST00000227868 CTTNBP2Q8WZ74 1663 aa21.91■■□□□ 1.1
PDHX-201ENST00000227868 GRIN2BQ13224 1484 aa21.9■■□□□ 1.1
PDHX-201ENST00000227868 FHOD3Q2V2M9 1422 aa21.9■■□□□ 1.1
PDHX-201ENST00000227868 FAM50AQ14320 339 aaKnown RBP21.87■■□□□ 1.09
PDHX-201ENST00000227868 FHAD1B1AJZ9 1412 aa21.86■■□□□ 1.09
PDHX-201ENST00000227868 TIAM1Q13009 1591 aa21.86■■□□□ 1.09
PDHX-201ENST00000227868 ADAMTS12P58397 1594 aa21.86■■□□□ 1.09
PDHX-201ENST00000227868 EIF4G3O43432 1585 aaKnown RBP21.84■■□□□ 1.09
PDHX-201ENST00000227868 NEUROD1Q13562 356 aa21.83■■□□□ 1.09
PDHX-201ENST00000227868 LRRC9Q6ZRR7 1453 aa21.83■■□□□ 1.08
PDHX-201ENST00000227868 PHLDB1Q86UU1 1377 aa21.81■■□□□ 1.08
PDHX-201ENST00000227868 ACIN1Q9UKV3 1341 aaKnown RBP21.8■■□□□ 1.08
PDHX-201ENST00000227868 EFCAB5A4FU69 1503 aa21.8■■□□□ 1.08
PDHX-201ENST00000227868 PCF11O94913 1555 aaKnown RBP21.79■■□□□ 1.08
PDHX-201ENST00000227868 CLSPNQ9HAW4 1339 aa21.78■■□□□ 1.08
PDHX-201ENST00000227868 YTHDC1Q96MU7 727 aaKnown RBP21.77■■□□□ 1.08
PDHX-201ENST00000227868 MIER1Q8N108 512 aa21.77■■□□□ 1.08
PDHX-201ENST00000227868 MAP3K1Q13233 1512 aa21.76■■□□□ 1.07
PDHX-201ENST00000227868 SNAPC4Q5SXM2 1469 aa21.76■■□□□ 1.07
PDHX-201ENST00000227868 RAB3GAP2Q9H2M9 1393 aa21.74■■□□□ 1.07
PDHX-201ENST00000227868 CENPBP07199 599 aaPredicted RBP21.74■■□□□ 1.07
PDHX-201ENST00000227868 SAMD9Q5K651 1589 aa21.7■■□□□ 1.06
PDHX-201ENST00000227868 CASKIN1Q8WXD9 1431 aa21.68■■□□□ 1.06
PDHX-201ENST00000227868 MAGI1Q96QZ7 1491 aaPredicted RBP21.68■■□□□ 1.06
PDHX-201ENST00000227868 FYCO1Q9BQS8 1478 aa21.67■■□□□ 1.06
PDHX-201ENST00000227868 IQGAP2Q13576 1575 aa21.66■■□□□ 1.06
PDHX-201ENST00000227868 GRIN2AQ12879 1464 aa21.65■■□□□ 1.06
PDHX-201ENST00000227868 FMN1Q68DA7 1419 aa21.65■■□□□ 1.06
PDHX-201ENST00000227868 SETD5Q9C0A6 1442 aa21.65■■□□□ 1.06
PDHX-201ENST00000227868 CFAP43Q8NDM7 1665 aa21.63■■□□□ 1.05
PDHX-201ENST00000227868 SYNJ2O15056 1496 aa21.62■■□□□ 1.05
PDHX-201ENST00000227868 MTUS2Q5JR59 1369 aa21.61■■□□□ 1.05
PDHX-201ENST00000227868 GTF3C3Q9Y5Q9 886 aa21.6■■□□□ 1.05
PDHX-201ENST00000227868 CHMP7Q8WUX9 453 aaPredicted RBP21.59■■□□□ 1.05
PDHX-201ENST00000227868 KIAA0586Q9BVV6 1533 aa21.58■■□□□ 1.05
PDHX-201ENST00000227868 SIN3AQ96ST3 1273 aa21.57■■□□□ 1.04
PDHX-201ENST00000227868 ARID3CA6NKF2 412 aa21.55■■□□□ 1.04
PDHX-201ENST00000227868 UGGT2Q9NYU1 1516 aa21.55■■□□□ 1.04
PDHX-201ENST00000227868 FBLN2P98095 1184 aa21.54■■□□□ 1.04
PDHX-201ENST00000227868 MAPKBP1O60336 1514 aa21.52■■□□□ 1.04
PDHX-201ENST00000227868 CEP170Q5SW79 1584 aa21.52■■□□□ 1.03
PDHX-201ENST00000227868 FGD6Q6ZV73 1430 aa21.49■■□□□ 1.03
PDHX-201ENST00000227868 NUP160Q12769 1436 aa21.47■■□□□ 1.03
PDHX-201ENST00000227868 DISP1Q96F81 1524 aa21.45■■□□□ 1.03
PDHX-201ENST00000227868 KIAA0556O60303 1618 aa21.44■■□□□ 1.02
PDHX-201ENST00000227868 LRRIQ1Q96JM4 1722 aa21.43■■□□□ 1.02
PDHX-201ENST00000227868 NCOA2Q15596 1464 aa21.43■■□□□ 1.02
PDHX-201ENST00000227868 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.41■■□□□ 1.02
PDHX-201ENST00000227868 PTPRKQ15262 1439 aa21.39■■□□□ 1.02
PDHX-201ENST00000227868 CHIC2Q9UKJ5 165 aa21.38■■□□□ 1.01
PDHX-201ENST00000227868 MYOM3Q5VTT5 1437 aa21.37■■□□□ 1.01
PDHX-201ENST00000227868 HECW1Q76N89 1606 aa21.36■■□□□ 1.01
PDHX-201ENST00000227868 JPH4Q96JJ6 628 aa21.36■■□□□ 1.01
PDHX-201ENST00000227868 CCDC18Q5T9S5 1454 aa21.34■■□□□ 1.01
PDHX-201ENST00000227868 RRP7BPQ9NSQ0 103 aa21.34■■□□□ 1.01
PDHX-201ENST00000227868 HIRIP3Q9BW71 556 aaPredicted RBP21.33■■□□□ 1.01
PDHX-201ENST00000227868 MAGI3Q5TCQ9 1506 aa21.33■■□□□ 1
PDHX-201ENST00000227868 CHD1O14646 1710 aa21.32■■□□□ 1
PDHX-201ENST00000227868 EHBP1L1Q8N3D4 1523 aa21.31■■□□□ 1
PDHX-201ENST00000227868 EPRSP07814 1512 aaKnown RBP21.31■■□□□ 1
PDHX-201ENST00000227868 SUPT6HQ7KZ85 1726 aaKnown RBP21.3■■□□□ 1
PDHX-201ENST00000227868 CARMIL2Q6F5E8 1435 aa21.3■■□□□ 1
PDHX-201ENST00000227868 CDK13Q14004 1512 aaKnown RBP21.29■■□□□ 1
PDHX-201ENST00000227868 HFM1A2PYH4 1435 aa21.28■■□□□ 1
PDHX-201ENST00000227868 PPP1R15AO75807 674 aaPredicted RBP21.26■□□□□ 0.99
PDHX-201ENST00000227868 NAIPQ13075 1403 aa21.25■□□□□ 0.99
PDHX-201ENST00000227868 RAPGEF6Q8TEU7 1601 aa21.25■□□□□ 0.99
PDHX-201ENST00000227868 DDX10Q13206 875 aaKnown RBP21.25■□□□□ 0.99
PDHX-201ENST00000227868 TRIM52Q96A61 297 aa21.24■□□□□ 0.99
PDHX-201ENST00000227868 PTPN23Q9H3S7 1636 aa21.24■□□□□ 0.99
PDHX-201ENST00000227868 TIMELESSQ9UNS1 1208 aa21.23■□□□□ 0.99
PDHX-201ENST00000227868 TONSLQ96HA7 1378 aa21.23■□□□□ 0.99
PDHX-201ENST00000227868 NUP153P49790 1475 aaKnown RBP21.23■□□□□ 0.99
PDHX-201ENST00000227868 UACAQ9BZF9 1416 aa21.22■□□□□ 0.99
PDHX-201ENST00000227868 PLB1Q6P1J6 1458 aa21.2■□□□□ 0.98
PDHX-201ENST00000227868 KCNH8Q96L42 1107 aa21.19■□□□□ 0.98
PDHX-201ENST00000227868 PRG4Q92954 1404 aaPredicted RBP21.19■□□□□ 0.98
PDHX-201ENST00000227868 ARHGEF11O15085 1522 aa21.18■□□□□ 0.98
PDHX-201ENST00000227868 SHROOM2Q13796 1616 aa21.14■□□□□ 0.97
PDHX-201ENST00000227868 ZNF644Q9H582 1327 aaPredicted RBP21.13■□□□□ 0.97
PDHX-201ENST00000227868 TCOF1Q13428 1488 aaKnown RBP21.11■□□□□ 0.97
PDHX-201ENST00000227868 CDK11AQ9UQ88 783 aaPredicted RBP21.11■□□□□ 0.97
PDHX-201ENST00000227868 ABCA8O94911 1581 aa21.11■□□□□ 0.97
PDHX-201ENST00000227868 FOXD1Q16676 465 aa21.1■□□□□ 0.97
PDHX-201ENST00000227868 MIA2Q96PC5 1412 aa21.08■□□□□ 0.97
PDHX-201ENST00000227868 PTPRGP23470 1445 aa21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms