RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 TNIKQ9UKE5 1360 aa16.2■□□□□ 0.18
CCND1-201ENST00000227507 DNAJC5BQ9UF47 199 aa16.2■□□□□ 0.18
CCND1-201ENST00000227507 HIRIP3Q9BW71 556 aaPredicted RBP16.19■□□□□ 0.18
CCND1-201ENST00000227507 RBM19Q9Y4C8 960 aaKnown RBP16.18■□□□□ 0.18
CCND1-201ENST00000227507 EIF5BO60841 1220 aaKnown RBP16.16■□□□□ 0.18
CCND1-201ENST00000227507 CFTRP13569 1480 aa16.16■□□□□ 0.18
CCND1-201ENST00000227507 MTUS2Q5JR59 1369 aa16.15■□□□□ 0.18
CCND1-201ENST00000227507 IRX6P78412 446 aaPredicted RBP16.15■□□□□ 0.18
CCND1-201ENST00000227507 NESP48681 1621 aa16.11■□□□□ 0.17
CCND1-201ENST00000227507 PLEKHD1A6NEE1 506 aa16.09■□□□□ 0.17
CCND1-201ENST00000227507 FGD5Q6ZNL6 1462 aa16.07■□□□□ 0.16
CCND1-201ENST00000227507 ANP32CO43423 234 aa16.05■□□□□ 0.16
CCND1-201ENST00000227507 PEG3Q9GZU2 1588 aa16.04■□□□□ 0.16
CCND1-201ENST00000227507 RUSC2Q8N2Y8 1516 aa16.03■□□□□ 0.16
CCND1-201ENST00000227507 CNGB1Q14028 1251 aaPredicted RBP16.01■□□□□ 0.15
CCND1-201ENST00000227507 RAPGEF2Q9Y4G8 1499 aa16.01■□□□□ 0.15
CCND1-201ENST00000227507 CARMIL2Q6F5E8 1435 aa16■□□□□ 0.15
CCND1-201ENST00000227507 FHAD1B1AJZ9 1412 aa15.99■□□□□ 0.15
CCND1-201ENST00000227507 RAD54L2Q9Y4B4 1467 aa15.99■□□□□ 0.15
CCND1-201ENST00000227507 NBR1Q14596 966 aa15.98■□□□□ 0.15
CCND1-201ENST00000227507 ANO8Q9HCE9 1232 aaPredicted RBP15.98■□□□□ 0.15
CCND1-201ENST00000227507 MRC2Q9UBG0 1479 aa15.98■□□□□ 0.15
CCND1-201ENST00000227507 DAXXQ9UER7 740 aaPredicted RBP15.98■□□□□ 0.15
CCND1-201ENST00000227507 GAPVD1Q14C86 1478 aa15.97■□□□□ 0.15
CCND1-201ENST00000227507 TSPY4P0CV99 314 aa15.97■□□□□ 0.15
CCND1-201ENST00000227507 TSPY10P0CW01 314 aa15.97■□□□□ 0.15
CCND1-201ENST00000227507 HNRNPUQ00839 825 aaKnown RBP eCLIP15.96■□□□□ 0.15
CCND1-201ENST00000227507 LAMC3Q9Y6N6 1575 aa15.94■□□□□ 0.14
CCND1-201ENST00000227507 SIN3AQ96ST3 1273 aa15.93■□□□□ 0.14
CCND1-201ENST00000227507 ESF1Q9H501 851 aaKnown RBP15.92■□□□□ 0.14
CCND1-201ENST00000227507 CHIC2Q9UKJ5 165 aa15.92■□□□□ 0.14
CCND1-201ENST00000227507 DHX57Q6P158 1386 aaKnown RBP15.92■□□□□ 0.14
CCND1-201ENST00000227507 KANK4Q5T7N3 995 aaPredicted RBP15.92■□□□□ 0.14
CCND1-201ENST00000227507 JPH4Q96JJ6 628 aa15.91■□□□□ 0.14
CCND1-201ENST00000227507 POLR3GLQ9BT43 218 aa15.91■□□□□ 0.14
CCND1-201ENST00000227507 TOPBP1Q92547 1522 aa15.9■□□□□ 0.14
CCND1-201ENST00000227507 IGF1RP08069 1367 aa15.9■□□□□ 0.14
CCND1-201ENST00000227507 AQRO60306 1485 aaKnown RBP eCLIP15.89■□□□□ 0.139e-8■■■■□ 19.6
CCND1-201ENST00000227507 CFDP1Q9UEE9 299 aaPredicted RBP15.88■□□□□ 0.13
CCND1-201ENST00000227507 PLEKHG5O94827 1062 aa15.88■□□□□ 0.13
CCND1-201ENST00000227507 FMN1Q68DA7 1419 aa15.86■□□□□ 0.13
CCND1-201ENST00000227507 OSCARQ8IYS5 282 aa15.85■□□□□ 0.13
CCND1-201ENST00000227507 SYNJ1O43426 1573 aa15.85■□□□□ 0.13
CCND1-201ENST00000227507 MSH5O43196 834 aa15.85■□□□□ 0.13
CCND1-201ENST00000227507 IFT140Q96RY7 1462 aa15.84■□□□□ 0.13
CCND1-201ENST00000227507 DEKP35659 375 aaKnown RBP15.84■□□□□ 0.13
CCND1-201ENST00000227507 CCDC136Q96JN2 1154 aa15.84■□□□□ 0.13
CCND1-201ENST00000227507 VPS8Q8N3P4 1428 aa15.84■□□□□ 0.13
CCND1-201ENST00000227507 POLA1P09884 1462 aaPredicted RBP15.83■□□□□ 0.13
CCND1-201ENST00000227507 RTL5Q5HYW3 569 aaPredicted RBP15.83■□□□□ 0.12
CCND1-201ENST00000227507 CUX1P39880 1505 aa15.83■□□□□ 0.12
CCND1-201ENST00000227507 GRIN2BQ13224 1484 aa15.82■□□□□ 0.12
CCND1-201ENST00000227507 DNMBPQ6XZF7 1577 aa15.82■□□□□ 0.12
CCND1-201ENST00000227507 ZNF326Q5BKZ1 582 aaKnown RBP15.82■□□□□ 0.12
CCND1-201ENST00000227507 TOP2BQ02880 1626 aa15.8■□□□□ 0.12
CCND1-201ENST00000227507 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.79■□□□□ 0.121e-6■■□□□ 11.9
CCND1-201ENST00000227507 FHOD3Q2V2M9 1422 aa15.78■□□□□ 0.12
CCND1-201ENST00000227507 CCNB3Q8WWL7 1395 aa15.78■□□□□ 0.12
CCND1-201ENST00000227507 B4GALNT3Q6L9W6 998 aa15.77■□□□□ 0.11
CCND1-201ENST00000227507 FAM9BQ8IZU0 186 aa15.77■□□□□ 0.11
CCND1-201ENST00000227507 SENP3-EIF4A1A0A087X0R7 540 aa15.76■□□□□ 0.11
CCND1-201ENST00000227507 RTN4Q9NQC3 1192 aaKnown RBP15.75■□□□□ 0.11
CCND1-201ENST00000227507 RRP7BPQ9NSQ0 103 aa15.75■□□□□ 0.11
CCND1-201ENST00000227507 SALL2Q9Y467 1007 aaPredicted RBP15.73■□□□□ 0.11
CCND1-201ENST00000227507 TRHP20396 242 aaPredicted RBP15.73■□□□□ 0.11
CCND1-201ENST00000227507 PTPRGP23470 1445 aa15.72■□□□□ 0.11
CCND1-201ENST00000227507 NPM2Q86SE8 214 aaKnown RBP15.71■□□□□ 0.1
CCND1-201ENST00000227507 CHGAP10645 457 aaKnown RBP15.7■□□□□ 0.1
CCND1-201ENST00000227507 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.7■□□□□ 0.1
CCND1-201ENST00000227507 STAG3Q9UJ98 1225 aa15.7■□□□□ 0.1
CCND1-201ENST00000227507 SLC4A1APQ9BWU0 796 aaKnown RBP15.7■□□□□ 0.1
CCND1-201ENST00000227507 PLPPR3Q6T4P5 718 aa15.7■□□□□ 0.1
CCND1-201ENST00000227507 RAB3GAP2Q9H2M9 1393 aa15.67■□□□□ 0.1
CCND1-201ENST00000227507 CYB5RLQ6IPT4 315 aa15.66■□□□□ 0.1
CCND1-201ENST00000227507 TONSLQ96HA7 1378 aa15.66■□□□□ 0.1
CCND1-201ENST00000227507 ANP32AP39687 249 aaKnown RBP15.66■□□□□ 0.1
CCND1-201ENST00000227507 URB2Q14146 1524 aaKnown RBP15.66■□□□□ 0.1
CCND1-201ENST00000227507 ABCA10Q8WWZ4 1543 aa15.66■□□□□ 0.1
CCND1-201ENST00000227507 CCER2I3L3R5 266 aa15.65■□□□□ 0.1
CCND1-201ENST00000227507 PODXL2Q9NZ53 605 aa15.65■□□□□ 0.1
CCND1-201ENST00000227507 NOP58Q9Y2X3 529 aaKnown RBP15.64■□□□□ 0.09
CCND1-201ENST00000227507 FANCIQ9NVI1 1328 aa15.64■□□□□ 0.09
CCND1-201ENST00000227507 SNAPC4Q5SXM2 1469 aa15.64■□□□□ 0.09
CCND1-201ENST00000227507 ARHGAP35Q9NRY4 1499 aa15.64■□□□□ 0.09
CCND1-201ENST00000227507 PPP4R2Q9NY27 417 aa15.63■□□□□ 0.09
CCND1-201ENST00000227507 EFCAB2Q5VUJ9 269 aa15.62■□□□□ 0.09
CCND1-201ENST00000227507 ARID4BQ4LE39 1312 aaPredicted RBP15.62■□□□□ 0.09
CCND1-201ENST00000227507 ERICH3Q5RHP9 1530 aa15.61■□□□□ 0.09
CCND1-201ENST00000227507 PPP1R15AO75807 674 aaPredicted RBP15.61■□□□□ 0.09
CCND1-201ENST00000227507 ZBTB47Q9UFB7 747 aaPredicted RBP15.61■□□□□ 0.09
CCND1-201ENST00000227507 UBE2Q2Q8WVN8 375 aa15.6■□□□□ 0.09
CCND1-201ENST00000227507 MRS2Q9HD23 443 aa15.59■□□□□ 0.09
CCND1-201ENST00000227507 PRXQ9BXM0 1461 aa15.59■□□□□ 0.09
CCND1-201ENST00000227507 KIF21BO75037 1637 aa15.59■□□□□ 0.09
CCND1-201ENST00000227507 CCDC18Q5T9S5 1454 aa15.58■□□□□ 0.08
CCND1-201ENST00000227507 PAK3O75914 559 aaPredicted RBP15.54■□□□□ 0.08
CCND1-201ENST00000227507 PRG4Q92954 1404 aaPredicted RBP15.53■□□□□ 0.08
CCND1-201ENST00000227507 LAS1LQ9Y4W2 734 aaKnown RBP15.52■□□□□ 0.08
CCND1-201ENST00000227507 PKNOX2Q96KN3 472 aa15.52■□□□□ 0.08
CCND1-201ENST00000227507 SETD5Q9C0A6 1442 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms