RNA–Protein interactions for RNA: ENST00000224073.5

EDF1-201, Transcript of endothelial differentiation related factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDF1, Length 640 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1-201ENST00000224073 RUSC2Q8N2Y8 1516 aa21.83■■□□□ 1.09
EDF1-201ENST00000224073 CUL7Q14999 1698 aa21.79■■□□□ 1.08
EDF1-201ENST00000224073 CARMIL1Q5VZK9 1371 aa21.79■■□□□ 1.08
EDF1-201ENST00000224073 TTBK1Q5TCY1 1321 aaPredicted RBP21.73■■□□□ 1.07
EDF1-201ENST00000224073 KIAA0586Q9BVV6 1533 aa21.72■■□□□ 1.07
EDF1-201ENST00000224073 RAPGEF2Q9Y4G8 1499 aa21.59■■□□□ 1.05
EDF1-201ENST00000224073 IQGAP2Q13576 1575 aa21.57■■□□□ 1.04
EDF1-201ENST00000224073 ADCY10Q96PN6 1610 aa21.55■■□□□ 1.04
EDF1-201ENST00000224073 PTPRGP23470 1445 aa21.54■■□□□ 1.04
EDF1-201ENST00000224073 NPM1P06748 294 aaKnown RBP eCLIP21.53■■□□□ 1.04
EDF1-201ENST00000224073 CARMIL2Q6F5E8 1435 aa21.5■■□□□ 1.03
EDF1-201ENST00000224073 TNIKQ9UKE5 1360 aa21.48■■□□□ 1.03
EDF1-201ENST00000224073 DISP1Q96F81 1524 aa21.48■■□□□ 1.03
EDF1-201ENST00000224073 KIF13AQ9H1H9 1805 aa21.46■■□□□ 1.03
EDF1-201ENST00000224073 FAM69CQ0P6D2 419 aa21.46■■□□□ 1.03
EDF1-201ENST00000224073 FAM9AQ8IZU1 332 aaPredicted RBP21.44■■□□□ 1.02
EDF1-201ENST00000224073 PRXQ9BXM0 1461 aa21.42■■□□□ 1.02
EDF1-201ENST00000224073 UGGT2Q9NYU1 1516 aa21.4■■□□□ 1.02
EDF1-201ENST00000224073 CTTNBP2Q8WZ74 1663 aa21.39■■□□□ 1.01
EDF1-201ENST00000224073 MAPKBP1O60336 1514 aa21.39■■□□□ 1.01
EDF1-201ENST00000224073 ABCC10Q5T3U5 1492 aa21.39■■□□□ 1.01
EDF1-201ENST00000224073 KIAA0556O60303 1618 aa21.38■■□□□ 1.01
EDF1-201ENST00000224073 CSRNP3Q8WYN3 585 aa21.38■■□□□ 1.01
EDF1-201ENST00000224073 DIP2BQ9P265 1576 aa21.36■■□□□ 1.01
EDF1-201ENST00000224073 UACAQ9BZF9 1416 aa21.35■■□□□ 1.01
EDF1-201ENST00000224073 ABCC2Q92887 1545 aa21.34■■□□□ 1.01
EDF1-201ENST00000224073 P3H3Q8IVL6 736 aa21.33■■□□□ 1.01
EDF1-201ENST00000224073 RANGAP1P46060 587 aaPredicted RBP21.32■■□□□ 1
EDF1-201ENST00000224073 EHMT2Q96KQ7 1210 aa21.31■■□□□ 1
EDF1-201ENST00000224073 ASXL2Q76L83 1435 aa21.29■■□□□ 1
EDF1-201ENST00000224073 TSPOAP1O95153 1857 aa21.29■■□□□ 1
EDF1-201ENST00000224073 UHRF1BP1LA0JNW5 1464 aa21.28■■□□□ 1
EDF1-201ENST00000224073 PLB1Q6P1J6 1458 aa21.27■■□□□ 1
EDF1-201ENST00000224073 CHIC1Q5VXU3 224 aa21.26■□□□□ 0.99
EDF1-201ENST00000224073 ARID3CA6NKF2 412 aa21.25■□□□□ 0.99
EDF1-201ENST00000224073 GOLGA3Q08378 1498 aa21.24■□□□□ 0.99
EDF1-201ENST00000224073 ZCCHC11Q5TAX3 1644 aaKnown RBP21.22■□□□□ 0.99
EDF1-201ENST00000224073 KDM5BQ9UGL1 1544 aa21.21■□□□□ 0.99
EDF1-201ENST00000224073 EEA1Q15075 1411 aa21.19■□□□□ 0.98
EDF1-201ENST00000224073 ABCA8O94911 1581 aa21.16■□□□□ 0.98
EDF1-201ENST00000224073 EPRSP07814 1512 aaKnown RBP21.14■□□□□ 0.98
EDF1-201ENST00000224073 KCNH8Q96L42 1107 aa21.14■□□□□ 0.97
EDF1-201ENST00000224073 KDM6BO15054 1643 aa21.12■□□□□ 0.97
EDF1-201ENST00000224073 AEBP2Q6ZN18 517 aaPredicted RBP21.12■□□□□ 0.97
EDF1-201ENST00000224073 GLI2P10070 1586 aa21.1■□□□□ 0.97
EDF1-201ENST00000224073 PPRC1Q5VV67 1664 aaKnown RBP21.1■□□□□ 0.97
EDF1-201ENST00000224073 SAMD9Q5K651 1589 aa21.1■□□□□ 0.97
EDF1-201ENST00000224073 WDR7Q9Y4E6 1490 aa21.09■□□□□ 0.97
EDF1-201ENST00000224073 FHOD3Q2V2M9 1422 aa21.08■□□□□ 0.97
EDF1-201ENST00000224073 KIF21BO75037 1637 aa21.06■□□□□ 0.96
EDF1-201ENST00000224073 UBTFP17480 764 aaKnown RBP21.05■□□□□ 0.96
EDF1-201ENST00000224073 MAP3K4Q9Y6R4 1608 aa21.04■□□□□ 0.96
EDF1-201ENST00000224073 ATP10BO94823 1461 aa21.02■□□□□ 0.96
EDF1-201ENST00000224073 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.02■□□□□ 0.96
EDF1-201ENST00000224073 HNRNPUL2Q1KMD3 747 aaKnown RBP21.02■□□□□ 0.96
EDF1-201ENST00000224073 COL17A1Q9UMD9 1497 aaPredicted RBP21.01■□□□□ 0.95
EDF1-201ENST00000224073 RAPGEF6Q8TEU7 1601 aa20.99■□□□□ 0.95
EDF1-201ENST00000224073 CD109Q6YHK3 1445 aa20.96■□□□□ 0.95
EDF1-201ENST00000224073 NUP153P49790 1475 aaKnown RBP20.94■□□□□ 0.94
EDF1-201ENST00000224073 TEX14Q8IWB6 1497 aa20.94■□□□□ 0.94
EDF1-201ENST00000224073 ATP1B4Q9UN42 357 aaPredicted RBP20.9■□□□□ 0.94
EDF1-201ENST00000224073 CFAP43Q8NDM7 1665 aa20.89■□□□□ 0.94
EDF1-201ENST00000224073 EFCAB5A4FU69 1503 aa20.89■□□□□ 0.94
EDF1-201ENST00000224073 KDM4FA0A1W2PPD8 638 aa20.88■□□□□ 0.93
EDF1-201ENST00000224073 MAGI3Q5TCQ9 1506 aa20.86■□□□□ 0.93
EDF1-201ENST00000224073 ARHGAP35Q9NRY4 1499 aa20.84■□□□□ 0.93
EDF1-201ENST00000224073 CDK13Q14004 1512 aaKnown RBP20.83■□□□□ 0.92
EDF1-201ENST00000224073 PLEKHD1A6NEE1 506 aa20.81■□□□□ 0.92
EDF1-201ENST00000224073 ABCA9Q8IUA7 1624 aa20.8■□□□□ 0.92
EDF1-201ENST00000224073 RAPGEF3O95398 923 aa20.75■□□□□ 0.91
EDF1-201ENST00000224073 ADGRL1O94910 1474 aa20.74■□□□□ 0.91
EDF1-201ENST00000224073 FMN1Q68DA7 1419 aa20.72■□□□□ 0.91
EDF1-201ENST00000224073 TTC37Q6PGP7 1564 aa20.7■□□□□ 0.9
EDF1-201ENST00000224073 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.69■□□□□ 0.99e-7■■■□□ 17.5
EDF1-201ENST00000224073 ARAP3Q8WWN8 1544 aa20.69■□□□□ 0.9
EDF1-201ENST00000224073 HECW1Q76N89 1606 aa20.69■□□□□ 0.9
EDF1-201ENST00000224073 LRRIQ1Q96JM4 1722 aa20.65■□□□□ 0.9
EDF1-201ENST00000224073 NEO1Q92859 1461 aa20.65■□□□□ 0.9
EDF1-201ENST00000224073 FANCAO15360 1455 aa20.62■□□□□ 0.89
EDF1-201ENST00000224073 PCF11O94913 1555 aaKnown RBP20.62■□□□□ 0.89
EDF1-201ENST00000224073 CLIP1P30622 1438 aa20.61■□□□□ 0.89
EDF1-201ENST00000224073 FRMPD1Q5SYB0 1578 aa20.61■□□□□ 0.89
EDF1-201ENST00000224073 AKNAQ7Z591 1439 aa20.61■□□□□ 0.89
EDF1-201ENST00000224073 KIF14Q15058 1648 aa20.6■□□□□ 0.89
EDF1-201ENST00000224073 PHLDB1Q86UU1 1377 aa20.6■□□□□ 0.89
EDF1-201ENST00000224073 CDK11AQ9UQ88 783 aaPredicted RBP20.58■□□□□ 0.89
EDF1-201ENST00000224073 CASKIN1Q8WXD9 1431 aa20.56■□□□□ 0.88
EDF1-201ENST00000224073 DENND4BO75064 1496 aaPredicted RBP20.56■□□□□ 0.88
EDF1-201ENST00000224073 PLCH2O75038 1416 aa20.54■□□□□ 0.88
EDF1-201ENST00000224073 TROQ12816 1431 aaPredicted RBP20.54■□□□□ 0.88
EDF1-201ENST00000224073 ARID4BQ4LE39 1312 aaPredicted RBP20.53■□□□□ 0.88
EDF1-201ENST00000224073 RICTORQ6R327 1708 aa20.52■□□□□ 0.88
EDF1-201ENST00000224073 CFAP74Q9C0B2 1584 aa20.51■□□□□ 0.87
EDF1-201ENST00000224073 LOC105371045A0A1W2PR82 267 aa20.51■□□□□ 0.87
EDF1-201ENST00000224073 SCAPERQ9BY12 1400 aa20.51■□□□□ 0.87
EDF1-201ENST00000224073 MYO5CQ9NQX4 1742 aa20.5■□□□□ 0.87
EDF1-201ENST00000224073 EFCAB2Q5VUJ9 269 aa20.49■□□□□ 0.87
EDF1-201ENST00000224073 YEATS2Q9ULM3 1422 aa20.48■□□□□ 0.87
EDF1-201ENST00000224073 CCDC18Q5T9S5 1454 aa20.47■□□□□ 0.87
EDF1-201ENST00000224073 FYCO1Q9BQS8 1478 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms