RNA–Protein interactions for RNA: ENST00000222388.6

ABCF2-201, Transcript of ATP binding cassette subfamily F member 2, humanhuman

TSL 5 BASIC

Gene ABCF2, Length 2,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF2-201ENST00000222388 MAGI1Q96QZ7 1491 aaPredicted RBP19.59■□□□□ 0.73
ABCF2-201ENST00000222388 CCER1Q8TC90 406 aaPredicted RBP19.58■□□□□ 0.72
ABCF2-201ENST00000222388 TTBK1Q5TCY1 1321 aaPredicted RBP19.56■□□□□ 0.72
ABCF2-201ENST00000222388 RANGAP1P46060 587 aaPredicted RBP19.53■□□□□ 0.72
ABCF2-201ENST00000222388 FBLN2P98095 1184 aa19.53■□□□□ 0.72
ABCF2-201ENST00000222388 SYNJ2O15056 1496 aa19.52■□□□□ 0.72
ABCF2-201ENST00000222388 CTTNBP2Q8WZ74 1663 aa19.51■□□□□ 0.71
ABCF2-201ENST00000222388 CHMP7Q8WUX9 453 aaPredicted RBP19.51■□□□□ 0.71
ABCF2-201ENST00000222388 GRIN2AQ12879 1464 aa19.5■□□□□ 0.71
ABCF2-201ENST00000222388 CLIP1P30622 1438 aa19.46■□□□□ 0.71
ABCF2-201ENST00000222388 CHD1O14646 1710 aa19.45■□□□□ 0.7
ABCF2-201ENST00000222388 VPS8Q8N3P4 1428 aa19.4■□□□□ 0.7
ABCF2-201ENST00000222388 CEP170Q5SW79 1584 aa19.39■□□□□ 0.69
ABCF2-201ENST00000222388 IQGAP2Q13576 1575 aa19.37■□□□□ 0.69
ABCF2-201ENST00000222388 NUP160Q12769 1436 aa19.34■□□□□ 0.69
ABCF2-201ENST00000222388 KIAA0586Q9BVV6 1533 aa19.33■□□□□ 0.68
ABCF2-201ENST00000222388 ARHGAP35Q9NRY4 1499 aa19.32■□□□□ 0.68
ABCF2-201ENST00000222388 ARAP1Q96P48 1450 aa19.28■□□□□ 0.68
ABCF2-201ENST00000222388 APLP2Q06481 763 aa19.27■□□□□ 0.68
ABCF2-201ENST00000222388 P3H3Q8IVL6 736 aa19.27■□□□□ 0.68
ABCF2-201ENST00000222388 EFCAB5A4FU69 1503 aa19.27■□□□□ 0.68
ABCF2-201ENST00000222388 SAMD9Q5K651 1589 aa19.25■□□□□ 0.67
ABCF2-201ENST00000222388 UGGT2Q9NYU1 1516 aa19.23■□□□□ 0.67
ABCF2-201ENST00000222388 FHOD3Q2V2M9 1422 aa19.23■□□□□ 0.67
ABCF2-201ENST00000222388 HNRNPUL2Q1KMD3 747 aaKnown RBP19.19■□□□□ 0.66
ABCF2-201ENST00000222388 JPH4Q96JJ6 628 aa19.19■□□□□ 0.66
ABCF2-201ENST00000222388 KIAA0556O60303 1618 aa19.17■□□□□ 0.66
ABCF2-201ENST00000222388 DIEXFQ68CQ4 756 aaKnown RBP19.17■□□□□ 0.66
ABCF2-201ENST00000222388 CLASP1Q7Z460 1538 aa19.17■□□□□ 0.66
ABCF2-201ENST00000222388 DISP1Q96F81 1524 aa19.16■□□□□ 0.66
ABCF2-201ENST00000222388 SHROOM2Q13796 1616 aa19.13■□□□□ 0.65
ABCF2-201ENST00000222388 CARMIL2Q6F5E8 1435 aa19.12■□□□□ 0.65
ABCF2-201ENST00000222388 OSCARQ8IYS5 282 aa19.12■□□□□ 0.65
ABCF2-201ENST00000222388 PRG4Q92954 1404 aaPredicted RBP19.11■□□□□ 0.65
ABCF2-201ENST00000222388 FMN1Q68DA7 1419 aa19.1■□□□□ 0.65
ABCF2-201ENST00000222388 PCF11O94913 1555 aaKnown RBP19.09■□□□□ 0.65
ABCF2-201ENST00000222388 SCAF1Q9H7N4 1312 aaKnown RBP19.09■□□□□ 0.65
ABCF2-201ENST00000222388 ZNF316A6NFI3 1004 aaPredicted RBP19.06■□□□□ 0.64
ABCF2-201ENST00000222388 ATP1B4Q9UN42 357 aaPredicted RBP19.06■□□□□ 0.64
ABCF2-201ENST00000222388 ERCC6L2Q5T890 1561 aa19.04■□□□□ 0.64
ABCF2-201ENST00000222388 FYCO1Q9BQS8 1478 aa19.02■□□□□ 0.64
ABCF2-201ENST00000222388 CASKIN1Q8WXD9 1431 aa19.02■□□□□ 0.64
ABCF2-201ENST00000222388 KANK4Q5T7N3 995 aaPredicted RBP18.99■□□□□ 0.63
ABCF2-201ENST00000222388 ACIN1Q9UKV3 1341 aaKnown RBP18.98■□□□□ 0.63
ABCF2-201ENST00000222388 LRRIQ1Q96JM4 1722 aa18.96■□□□□ 0.63
ABCF2-201ENST00000222388 HECW1Q76N89 1606 aa18.96■□□□□ 0.63
ABCF2-201ENST00000222388 RAPGEF6Q8TEU7 1601 aa18.96■□□□□ 0.63
ABCF2-201ENST00000222388 PTPRGP23470 1445 aa18.96■□□□□ 0.63
ABCF2-201ENST00000222388 PLB1Q6P1J6 1458 aa18.95■□□□□ 0.62
ABCF2-201ENST00000222388 RRBP1Q9P2E9 1410 aaKnown RBP18.95■□□□□ 0.62
ABCF2-201ENST00000222388 TIAM1Q13009 1591 aa18.94■□□□□ 0.62
ABCF2-201ENST00000222388 CFAP43Q8NDM7 1665 aa18.93■□□□□ 0.62
ABCF2-201ENST00000222388 NEUROD1Q13562 356 aa18.92■□□□□ 0.62
ABCF2-201ENST00000222388 ARID3CA6NKF2 412 aa18.92■□□□□ 0.62
ABCF2-201ENST00000222388 CENPBP07199 599 aaPredicted RBP18.91■□□□□ 0.62
ABCF2-201ENST00000222388 CLSPNQ9HAW4 1339 aa18.9■□□□□ 0.62
ABCF2-201ENST00000222388 ABCA8O94911 1581 aa18.89■□□□□ 0.61
ABCF2-201ENST00000222388 NUP153P49790 1475 aaKnown RBP18.89■□□□□ 0.61
ABCF2-201ENST00000222388 MAP3K1Q13233 1512 aa18.88■□□□□ 0.61
ABCF2-201ENST00000222388 DHX57Q6P158 1386 aaKnown RBP18.88■□□□□ 0.61
ABCF2-201ENST00000222388 CCDC18Q5T9S5 1454 aa18.88■□□□□ 0.61
ABCF2-201ENST00000222388 EPRSP07814 1512 aaKnown RBP18.87■□□□□ 0.61
ABCF2-201ENST00000222388 CDK13Q14004 1512 aaKnown RBP18.87■□□□□ 0.61
ABCF2-201ENST00000222388 DNAJC5Q9H3Z4 198 aa18.86■□□□□ 0.61
ABCF2-201ENST00000222388 CCNB3Q8WWL7 1395 aa18.85■□□□□ 0.61
ABCF2-201ENST00000222388 LRRC9Q6ZRR7 1453 aa18.83■□□□□ 0.61
ABCF2-201ENST00000222388 UACAQ9BZF9 1416 aa18.83■□□□□ 0.61
ABCF2-201ENST00000222388 ARHGEF11O15085 1522 aa18.83■□□□□ 0.6
ABCF2-201ENST00000222388 ABCC2Q92887 1545 aa18.8■□□□□ 0.6
ABCF2-201ENST00000222388 MTUS2Q5JR59 1369 aa18.8■□□□□ 0.6
ABCF2-201ENST00000222388 MAGI3Q5TCQ9 1506 aa18.77■□□□□ 0.6
ABCF2-201ENST00000222388 RIMBP3CA6NJZ7 1639 aa18.77■□□□□ 0.59
ABCF2-201ENST00000222388 RIMBP3BA6NNM3 1639 aa18.77■□□□□ 0.59
ABCF2-201ENST00000222388 RIMBP3Q9UFD9 1639 aa18.77■□□□□ 0.59
ABCF2-201ENST00000222388 ATP10BO94823 1461 aa18.75■□□□□ 0.59
ABCF2-201ENST00000222388 EHBP1L1Q8N3D4 1523 aa18.75■□□□□ 0.59
ABCF2-201ENST00000222388 ADCY10Q96PN6 1610 aa18.74■□□□□ 0.59
ABCF2-201ENST00000222388 MIER1Q8N108 512 aa18.74■□□□□ 0.59
ABCF2-201ENST00000222388 UHRF1BP1LA0JNW5 1464 aa18.73■□□□□ 0.59
ABCF2-201ENST00000222388 CDK11AQ9UQ88 783 aaPredicted RBP18.73■□□□□ 0.59
ABCF2-201ENST00000222388 GTF3C3Q9Y5Q9 886 aa18.73■□□□□ 0.59
ABCF2-201ENST00000222388 SUPT6HQ7KZ85 1726 aaKnown RBP18.71■□□□□ 0.59
ABCF2-201ENST00000222388 ZCCHC11Q5TAX3 1644 aaKnown RBP18.7■□□□□ 0.58
ABCF2-201ENST00000222388 ITGAEP38570 1179 aa18.69■□□□□ 0.58
ABCF2-201ENST00000222388 PELP1Q8IZL8 1130 aaKnown RBP18.69■□□□□ 0.58
ABCF2-201ENST00000222388 KDM5BQ9UGL1 1544 aa18.67■□□□□ 0.58
ABCF2-201ENST00000222388 NCOA2Q15596 1464 aa18.67■□□□□ 0.58
ABCF2-201ENST00000222388 PLEKHD1A6NEE1 506 aa18.66■□□□□ 0.58
ABCF2-201ENST00000222388 CYB5RLQ6IPT4 315 aa18.66■□□□□ 0.58
ABCF2-201ENST00000222388 TROQ12816 1431 aaPredicted RBP18.66■□□□□ 0.58
ABCF2-201ENST00000222388 YTHDC1Q96MU7 727 aaKnown RBP18.66■□□□□ 0.58
ABCF2-201ENST00000222388 PHLDB1Q86UU1 1377 aa18.65■□□□□ 0.58
ABCF2-201ENST00000222388 RAB3GAP2Q9H2M9 1393 aa18.64■□□□□ 0.58
ABCF2-201ENST00000222388 KIF14Q15058 1648 aa18.63■□□□□ 0.57
ABCF2-201ENST00000222388 SETD5Q9C0A6 1442 aa18.6■□□□□ 0.57
ABCF2-201ENST00000222388 NPM1P06748 294 aaKnown RBP eCLIP18.59■□□□□ 0.57
ABCF2-201ENST00000222388 MAPKBP1O60336 1514 aa18.58■□□□□ 0.57
ABCF2-201ENST00000222388 MYOM3Q5VTT5 1437 aa18.57■□□□□ 0.56
ABCF2-201ENST00000222388 FAM50AQ14320 339 aaKnown RBP18.56■□□□□ 0.56
ABCF2-201ENST00000222388 KCNH8Q96L42 1107 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms