RNA–Protein interactions for RNA: ENST00000220003.13

CSK-201, Transcript of C-terminal Src kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSK, Length 2,767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSK-201ENST00000220003 ZNF316A6NFI3 1004 aaPredicted RBP27.48■■□□□ 1.99
CSK-201ENST00000220003 KIF21AQ7Z4S6 1674 aa27.48■■□□□ 1.99
CSK-201ENST00000220003 PDS5BQ9NTI5 1447 aa27.44■■□□□ 1.98
CSK-201ENST00000220003 ABCA10Q8WWZ4 1543 aa27.41■■□□□ 1.98
CSK-201ENST00000220003 ITGAEP38570 1179 aa27.38■■□□□ 1.97
CSK-201ENST00000220003 MIER1Q8N108 512 aa27.36■■□□□ 1.97
CSK-201ENST00000220003 FHOD3Q2V2M9 1422 aa27.29■■□□□ 1.96
CSK-201ENST00000220003 AQRO60306 1485 aaKnown RBP eCLIP27.25■■□□□ 1.953e-6■■■■□ 24.7
CSK-201ENST00000220003 GAPVD1Q14C86 1478 aa27.25■■□□□ 1.95
CSK-201ENST00000220003 WDR97A6NE52 1622 aa27.16■■□□□ 1.94
CSK-201ENST00000220003 ARID3CA6NKF2 412 aa27.12■■□□□ 1.93
CSK-201ENST00000220003 ABCA5Q8WWZ7 1642 aa27.11■■□□□ 1.93
CSK-201ENST00000220003 ZNF608Q9ULD9 1512 aaPredicted RBP27.1■■□□□ 1.93
CSK-201ENST00000220003 TARBP1Q13395 1621 aaKnown RBP27.08■■□□□ 1.93
CSK-201ENST00000220003 MRC2Q9UBG0 1479 aa27.06■■□□□ 1.92
CSK-201ENST00000220003 CUL7Q14999 1698 aa27.06■■□□□ 1.92
CSK-201ENST00000220003 PCF11O94913 1555 aaKnown RBP27.05■■□□□ 1.92
CSK-201ENST00000220003 FAM50AQ14320 339 aaKnown RBP27.03■■□□□ 1.92
CSK-201ENST00000220003 ERCC6Q03468 1493 aa27.03■■□□□ 1.92
CSK-201ENST00000220003 TIAM1Q13009 1591 aa27■■□□□ 1.91
CSK-201ENST00000220003 PHLDB1Q86UU1 1377 aa26.99■■□□□ 1.91
CSK-201ENST00000220003 CCNB3Q8WWL7 1395 aa26.99■■□□□ 1.91
CSK-201ENST00000220003 CTTNBP2Q8WZ74 1663 aa26.98■■□□□ 1.91
CSK-201ENST00000220003 SUPT16HQ9Y5B9 1047 aaKnown RBP26.97■■□□□ 1.91
CSK-201ENST00000220003 BCL11AQ9H165 835 aa26.96■■□□□ 1.91
CSK-201ENST00000220003 LRRC9Q6ZRR7 1453 aa26.95■■□□□ 1.91
CSK-201ENST00000220003 FBLN2P98095 1184 aa26.95■■□□□ 1.9
CSK-201ENST00000220003 ANP32EQ9BTT0 268 aa26.94■■□□□ 1.9
CSK-201ENST00000220003 FHAD1B1AJZ9 1412 aa26.94■■□□□ 1.9
CSK-201ENST00000220003 RRBP1Q9P2E9 1410 aaKnown RBP26.92■■□□□ 1.9
CSK-201ENST00000220003 TSHZ2Q9NRE2 1034 aa26.88■■□□□ 1.89
CSK-201ENST00000220003 PBRM1Q86U86 1689 aa26.88■■□□□ 1.89
CSK-201ENST00000220003 CASKIN1Q8WXD9 1431 aa26.82■■□□□ 1.88
CSK-201ENST00000220003 DHX57Q6P158 1386 aaKnown RBP26.82■■□□□ 1.88
CSK-201ENST00000220003 CLSPNQ9HAW4 1339 aa26.81■■□□□ 1.88
CSK-201ENST00000220003 EFCAB5A4FU69 1503 aa26.81■■□□□ 1.88
CSK-201ENST00000220003 GRIN2BQ13224 1484 aa26.8■■□□□ 1.88
CSK-201ENST00000220003 WDR62O43379 1518 aa26.79■■□□□ 1.88
CSK-201ENST00000220003 SNAPC4Q5SXM2 1469 aa26.77■■□□□ 1.88
CSK-201ENST00000220003 FMN1Q68DA7 1419 aa26.77■■□□□ 1.88
CSK-201ENST00000220003 IFT140Q96RY7 1462 aa26.77■■□□□ 1.88
CSK-201ENST00000220003 FYCO1Q9BQS8 1478 aa26.77■■□□□ 1.88
CSK-201ENST00000220003 ADAMTS12P58397 1594 aa26.76■■□□□ 1.87
CSK-201ENST00000220003 MTUS2Q5JR59 1369 aa26.76■■□□□ 1.87
CSK-201ENST00000220003 CFAP43Q8NDM7 1665 aa26.73■■□□□ 1.87
CSK-201ENST00000220003 RAB3GAP2Q9H2M9 1393 aa26.72■■□□□ 1.87
CSK-201ENST00000220003 SAMD9Q5K651 1589 aa26.72■■□□□ 1.87
CSK-201ENST00000220003 LRRIQ1Q96JM4 1722 aa26.72■■□□□ 1.87
CSK-201ENST00000220003 CHMP7Q8WUX9 453 aaPredicted RBP26.71■■□□□ 1.87
CSK-201ENST00000220003 MAP3K1Q13233 1512 aa26.71■■□□□ 1.87
CSK-201ENST00000220003 EIF4G3O43432 1585 aaKnown RBP26.69■■□□□ 1.86
CSK-201ENST00000220003 IQGAP2Q13576 1575 aa26.66■■□□□ 1.86
CSK-201ENST00000220003 THOC2Q8NI27 1593 aaKnown RBP26.65■■□□□ 1.86
CSK-201ENST00000220003 CDK13Q14004 1512 aaKnown RBP26.6■■□□□ 1.85
CSK-201ENST00000220003 MAGI3Q5TCQ9 1506 aa26.59■■□□□ 1.85
CSK-201ENST00000220003 SIN3AQ96ST3 1273 aa26.58■■□□□ 1.85
CSK-201ENST00000220003 CHIC2Q9UKJ5 165 aa26.58■■□□□ 1.85
CSK-201ENST00000220003 GRIN2AQ12879 1464 aa26.56■■□□□ 1.84
CSK-201ENST00000220003 NCOA2Q15596 1464 aa26.55■■□□□ 1.84
CSK-201ENST00000220003 SETD5Q9C0A6 1442 aa26.54■■□□□ 1.84
CSK-201ENST00000220003 FGD6Q6ZV73 1430 aa26.54■■□□□ 1.84
CSK-201ENST00000220003 PTPRKQ15262 1439 aa26.52■■□□□ 1.84
CSK-201ENST00000220003 DISP1Q96F81 1524 aa26.48■■□□□ 1.83
CSK-201ENST00000220003 BCANQ96GW7 911 aa26.47■■□□□ 1.83
CSK-201ENST00000220003 RRP7BPQ9NSQ0 103 aa26.47■■□□□ 1.83
CSK-201ENST00000220003 KIAA0586Q9BVV6 1533 aa26.47■■□□□ 1.83
CSK-201ENST00000220003 EPRSP07814 1512 aaKnown RBP26.46■■□□□ 1.83
CSK-201ENST00000220003 CEP170Q5SW79 1584 aa26.44■■□□□ 1.82
CSK-201ENST00000220003 JPH4Q96JJ6 628 aa26.43■■□□□ 1.82
CSK-201ENST00000220003 MAPKBP1O60336 1514 aa26.41■■□□□ 1.82
CSK-201ENST00000220003 MYOM3Q5VTT5 1437 aa26.41■■□□□ 1.82
CSK-201ENST00000220003 UGGT2Q9NYU1 1516 aa26.41■■□□□ 1.82
CSK-201ENST00000220003 SYNJ2O15056 1496 aa26.4■■□□□ 1.82
CSK-201ENST00000220003 ZNF644Q9H582 1327 aaPredicted RBP26.39■■□□□ 1.82
CSK-201ENST00000220003 KIAA0556O60303 1618 aa26.38■■□□□ 1.81
CSK-201ENST00000220003 PLB1Q6P1J6 1458 aa26.38■■□□□ 1.81
CSK-201ENST00000220003 MAGI1Q96QZ7 1491 aaPredicted RBP26.36■■□□□ 1.81
CSK-201ENST00000220003 HECW1Q76N89 1606 aa26.36■■□□□ 1.81
CSK-201ENST00000220003 SUPT6HQ7KZ85 1726 aaKnown RBP26.35■■□□□ 1.81
CSK-201ENST00000220003 EHBP1L1Q8N3D4 1523 aa26.34■■□□□ 1.81
CSK-201ENST00000220003 NUP153P49790 1475 aaKnown RBP26.32■■□□□ 1.8
CSK-201ENST00000220003 KCNH8Q96L42 1107 aa26.31■■□□□ 1.8
CSK-201ENST00000220003 HIRIP3Q9BW71 556 aaPredicted RBP26.31■■□□□ 1.8
CSK-201ENST00000220003 CCDC18Q5T9S5 1454 aa26.3■■□□□ 1.8
CSK-201ENST00000220003 ZNF777Q9ULD5 760 aaPredicted RBP26.29■■□□□ 1.8
CSK-201ENST00000220003 PRG4Q92954 1404 aaPredicted RBP26.29■■□□□ 1.8
CSK-201ENST00000220003 PTPN23Q9H3S7 1636 aa26.28■■□□□ 1.8
CSK-201ENST00000220003 FKBP8Q14318 412 aa26.27■■□□□ 1.8
CSK-201ENST00000220003 TRIM52Q96A61 297 aa26.24■■□□□ 1.79
CSK-201ENST00000220003 RBM19Q9Y4C8 960 aaKnown RBP26.23■■□□□ 1.79
CSK-201ENST00000220003 FOXD1Q16676 465 aa26.22■■□□□ 1.79
CSK-201ENST00000220003 NAIPQ13075 1403 aa26.22■■□□□ 1.79
CSK-201ENST00000220003 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.21■■□□□ 1.79
CSK-201ENST00000220003 RAPGEF6Q8TEU7 1601 aa26.21■■□□□ 1.79
CSK-201ENST00000220003 ARHGEF11O15085 1522 aa26.21■■□□□ 1.79
CSK-201ENST00000220003 NUP160Q12769 1436 aa26.2■■□□□ 1.79
CSK-201ENST00000220003 HFM1A2PYH4 1435 aa26.16■■□□□ 1.78
CSK-201ENST00000220003 CARMIL2Q6F5E8 1435 aa26.14■■□□□ 1.78
CSK-201ENST00000220003 KDM6BO15054 1643 aa26.14■■□□□ 1.78
CSK-201ENST00000220003 CDK11AQ9UQ88 783 aaPredicted RBP26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms