RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 CLASP1Q7Z460 1538 aa21.49■■□□□ 1.03
TIMP1-201ENST00000218388 KIAA0586Q9BVV6 1533 aa21.48■■□□□ 1.03
TIMP1-201ENST00000218388 UBTFP17480 764 aaKnown RBP21.45■■□□□ 1.02
TIMP1-201ENST00000218388 EHMT2Q96KQ7 1210 aa21.44■■□□□ 1.02
TIMP1-201ENST00000218388 IQGAP2Q13576 1575 aa21.44■■□□□ 1.02
TIMP1-201ENST00000218388 SHROOM2Q13796 1616 aa21.37■■□□□ 1.01
TIMP1-201ENST00000218388 JPH4Q96JJ6 628 aa21.34■■□□□ 1.01
TIMP1-201ENST00000218388 TNIKQ9UKE5 1360 aa21.34■■□□□ 1.01
TIMP1-201ENST00000218388 UGGT2Q9NYU1 1516 aa21.31■■□□□ 1
TIMP1-201ENST00000218388 LOC105371045A0A1W2PR82 267 aa21.29■■□□□ 1
TIMP1-201ENST00000218388 PRG4Q92954 1404 aaPredicted RBP21.28■■□□□ 1
TIMP1-201ENST00000218388 CARMIL2Q6F5E8 1435 aa21.27■■□□□ 1
TIMP1-201ENST00000218388 EFCAB5A4FU69 1503 aa21.24■□□□□ 0.99
TIMP1-201ENST00000218388 ARHGEF11O15085 1522 aa21.23■□□□□ 0.99
TIMP1-201ENST00000218388 KIAA0556O60303 1618 aa21.22■□□□□ 0.99
TIMP1-201ENST00000218388 RANGAP1P46060 587 aaPredicted RBP21.21■□□□□ 0.99
TIMP1-201ENST00000218388 DNAJC5Q9H3Z4 198 aa21.21■□□□□ 0.99
TIMP1-201ENST00000218388 SAMD9Q5K651 1589 aa21.21■□□□□ 0.99
TIMP1-201ENST00000218388 DISP1Q96F81 1524 aa21.2■□□□□ 0.98
TIMP1-201ENST00000218388 RIMBP3CA6NJZ7 1639 aa21.19■□□□□ 0.98
TIMP1-201ENST00000218388 RIMBP3BA6NNM3 1639 aa21.19■□□□□ 0.98
TIMP1-201ENST00000218388 RIMBP3Q9UFD9 1639 aa21.19■□□□□ 0.98
TIMP1-201ENST00000218388 ERCC6L2Q5T890 1561 aa21.19■□□□□ 0.98
TIMP1-201ENST00000218388 CLIP1P30622 1438 aa21.16■□□□□ 0.98
TIMP1-201ENST00000218388 CEP162Q5TB80 1403 aa21.15■□□□□ 0.98
TIMP1-201ENST00000218388 ARHGAP35Q9NRY4 1499 aa21.12■□□□□ 0.97
TIMP1-201ENST00000218388 P3H3Q8IVL6 736 aa21.09■□□□□ 0.97
TIMP1-201ENST00000218388 PTPRGP23470 1445 aa21.08■□□□□ 0.97
TIMP1-201ENST00000218388 FHOD3Q2V2M9 1422 aa21.08■□□□□ 0.97
TIMP1-201ENST00000218388 ARAP1Q96P48 1450 aa21.07■□□□□ 0.96
TIMP1-201ENST00000218388 TTBK1Q5TCY1 1321 aaPredicted RBP21.04■□□□□ 0.96
TIMP1-201ENST00000218388 FMN1Q68DA7 1419 aa21.03■□□□□ 0.96
TIMP1-201ENST00000218388 CYB5RLQ6IPT4 315 aa20.99■□□□□ 0.95
TIMP1-201ENST00000218388 UACAQ9BZF9 1416 aa20.96■□□□□ 0.95
TIMP1-201ENST00000218388 ABCA8O94911 1581 aa20.94■□□□□ 0.94
TIMP1-201ENST00000218388 RAPGEF6Q8TEU7 1601 aa20.94■□□□□ 0.94
TIMP1-201ENST00000218388 UHRF1BP1LA0JNW5 1464 aa20.93■□□□□ 0.94
TIMP1-201ENST00000218388 PLB1Q6P1J6 1458 aa20.93■□□□□ 0.94
TIMP1-201ENST00000218388 ABCC2Q92887 1545 aa20.93■□□□□ 0.94
TIMP1-201ENST00000218388 ADCY10Q96PN6 1610 aa20.89■□□□□ 0.94
TIMP1-201ENST00000218388 HECW1Q76N89 1606 aa20.89■□□□□ 0.93
TIMP1-201ENST00000218388 VPS8Q8N3P4 1428 aa20.88■□□□□ 0.93
TIMP1-201ENST00000218388 PCF11O94913 1555 aaKnown RBP20.88■□□□□ 0.93
TIMP1-201ENST00000218388 CASKIN1Q8WXD9 1431 aa20.87■□□□□ 0.93
TIMP1-201ENST00000218388 FYCO1Q9BQS8 1478 aa20.87■□□□□ 0.93
TIMP1-201ENST00000218388 NPM1P06748 294 aaKnown RBP eCLIP20.84■□□□□ 0.93
TIMP1-201ENST00000218388 ATP1B4Q9UN42 357 aaPredicted RBP20.83■□□□□ 0.93
TIMP1-201ENST00000218388 NUP153P49790 1475 aaKnown RBP20.82■□□□□ 0.92
TIMP1-201ENST00000218388 KDM5BQ9UGL1 1544 aa20.81■□□□□ 0.92
TIMP1-201ENST00000218388 ZCCHC11Q5TAX3 1644 aaKnown RBP20.79■□□□□ 0.92
TIMP1-201ENST00000218388 CCDC18Q5T9S5 1454 aa20.79■□□□□ 0.92
TIMP1-201ENST00000218388 EPRSP07814 1512 aaKnown RBP20.77■□□□□ 0.92
TIMP1-201ENST00000218388 ATP10BO94823 1461 aa20.75■□□□□ 0.91
TIMP1-201ENST00000218388 ARID3CA6NKF2 412 aa20.74■□□□□ 0.91
TIMP1-201ENST00000218388 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.74■□□□□ 0.91
TIMP1-201ENST00000218388 HNRNPUL2Q1KMD3 747 aaKnown RBP20.74■□□□□ 0.91
TIMP1-201ENST00000218388 LRRIQ1Q96JM4 1722 aa20.73■□□□□ 0.91
TIMP1-201ENST00000218388 CDK13Q14004 1512 aaKnown RBP20.72■□□□□ 0.91
TIMP1-201ENST00000218388 APLP2Q06481 763 aa20.71■□□□□ 0.91
TIMP1-201ENST00000218388 MAPKBP1O60336 1514 aa20.71■□□□□ 0.91
TIMP1-201ENST00000218388 CDK11AQ9UQ88 783 aaPredicted RBP20.7■□□□□ 0.9
TIMP1-201ENST00000218388 CFAP43Q8NDM7 1665 aa20.68■□□□□ 0.9
TIMP1-201ENST00000218388 MAP3K1Q13233 1512 aa20.67■□□□□ 0.9
TIMP1-201ENST00000218388 ASXL2Q76L83 1435 aa20.66■□□□□ 0.9
TIMP1-201ENST00000218388 TIAM1Q13009 1591 aa20.66■□□□□ 0.9
TIMP1-201ENST00000218388 PLEKHD1A6NEE1 506 aa20.65■□□□□ 0.9
TIMP1-201ENST00000218388 WDR7Q9Y4E6 1490 aa20.64■□□□□ 0.89
TIMP1-201ENST00000218388 TROQ12816 1431 aaPredicted RBP20.6■□□□□ 0.89
TIMP1-201ENST00000218388 MTUS2Q5JR59 1369 aa20.59■□□□□ 0.89
TIMP1-201ENST00000218388 EHBP1L1Q8N3D4 1523 aa20.58■□□□□ 0.89
TIMP1-201ENST00000218388 KIF14Q15058 1648 aa20.56■□□□□ 0.88
TIMP1-201ENST00000218388 ABCC10Q5T3U5 1492 aa20.55■□□□□ 0.88
TIMP1-201ENST00000218388 LRRC9Q6ZRR7 1453 aa20.55■□□□□ 0.88
TIMP1-201ENST00000218388 MAGI3Q5TCQ9 1506 aa20.54■□□□□ 0.88
TIMP1-201ENST00000218388 KCNH8Q96L42 1107 aa20.53■□□□□ 0.88
TIMP1-201ENST00000218388 DIP2BQ9P265 1576 aa20.53■□□□□ 0.88
TIMP1-201ENST00000218388 GLI2P10070 1586 aa20.51■□□□□ 0.87
TIMP1-201ENST00000218388 SUPT6HQ7KZ85 1726 aaKnown RBP20.5■□□□□ 0.87
TIMP1-201ENST00000218388 KIF13AQ9H1H9 1805 aa20.48■□□□□ 0.87
TIMP1-201ENST00000218388 FAM69CQ0P6D2 419 aa20.48■□□□□ 0.87
TIMP1-201ENST00000218388 ABCA9Q8IUA7 1624 aa20.48■□□□□ 0.87
TIMP1-201ENST00000218388 KANK4Q5T7N3 995 aaPredicted RBP20.47■□□□□ 0.87
TIMP1-201ENST00000218388 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.46■□□□□ 0.872e-13■□□□□ 11.1
TIMP1-201ENST00000218388 TRHP20396 242 aaPredicted RBP20.45■□□□□ 0.86
TIMP1-201ENST00000218388 TTC37Q6PGP7 1564 aa20.43■□□□□ 0.86
TIMP1-201ENST00000218388 MAP3K4Q9Y6R4 1608 aa20.43■□□□□ 0.86
TIMP1-201ENST00000218388 NCOA2Q15596 1464 aa20.42■□□□□ 0.86
TIMP1-201ENST00000218388 MYO5CQ9NQX4 1742 aa20.41■□□□□ 0.86
TIMP1-201ENST00000218388 CD109Q6YHK3 1445 aa20.4■□□□□ 0.86
TIMP1-201ENST00000218388 ITSN2Q9NZM3 1697 aa20.39■□□□□ 0.86
TIMP1-201ENST00000218388 CCNB3Q8WWL7 1395 aa20.39■□□□□ 0.85
TIMP1-201ENST00000218388 CDC42BPAQ5VT25 1732 aa20.36■□□□□ 0.85
TIMP1-201ENST00000218388 PREX2Q70Z35 1606 aa20.36■□□□□ 0.85
TIMP1-201ENST00000218388 TSPOAP1O95153 1857 aa20.36■□□□□ 0.85
TIMP1-201ENST00000218388 ARAP3Q8WWN8 1544 aa20.36■□□□□ 0.85
TIMP1-201ENST00000218388 TEX14Q8IWB6 1497 aa20.35■□□□□ 0.85
TIMP1-201ENST00000218388 PLCH2O75038 1416 aa20.35■□□□□ 0.85
TIMP1-201ENST00000218388 CFAP74Q9C0B2 1584 aa20.34■□□□□ 0.85
TIMP1-201ENST00000218388 GPATCH8Q9UKJ3 1502 aaKnown RBP20.33■□□□□ 0.85
TIMP1-201ENST00000218388 PPARGC1BQ86YN6 1023 aaKnown RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 283.2 ms