RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 CTTNBP2Q8WZ74 1663 aa32.99■■■□□ 2.87
RHBDD3-201ENST00000216085 IQGAP2Q13576 1575 aa32.96■■■□□ 2.87
RHBDD3-201ENST00000216085 DNAJC5Q9H3Z4 198 aa32.93■■■□□ 2.86
RHBDD3-201ENST00000216085 UBTFP17480 764 aaKnown RBP32.92■■■□□ 2.86
RHBDD3-201ENST00000216085 EHMT2Q96KQ7 1210 aa32.92■■■□□ 2.86
RHBDD3-201ENST00000216085 SHROOM2Q13796 1616 aa32.89■■■□□ 2.86
RHBDD3-201ENST00000216085 JPH4Q96JJ6 628 aa32.88■■■□□ 2.85
RHBDD3-201ENST00000216085 PRG4Q92954 1404 aaPredicted RBP32.79■■■□□ 2.84
RHBDD3-201ENST00000216085 ARHGEF11O15085 1522 aa32.79■■■□□ 2.84
RHBDD3-201ENST00000216085 UGGT2Q9NYU1 1516 aa32.77■■■□□ 2.84
RHBDD3-201ENST00000216085 CARMIL2Q6F5E8 1435 aa32.75■■■□□ 2.83
RHBDD3-201ENST00000216085 RIMBP3CA6NJZ7 1639 aa32.72■■■□□ 2.83
RHBDD3-201ENST00000216085 RIMBP3BA6NNM3 1639 aa32.72■■■□□ 2.83
RHBDD3-201ENST00000216085 RIMBP3Q9UFD9 1639 aa32.72■■■□□ 2.83
RHBDD3-201ENST00000216085 TNIKQ9UKE5 1360 aa32.69■■■□□ 2.82
RHBDD3-201ENST00000216085 ERCC6L2Q5T890 1561 aa32.64■■■□□ 2.82
RHBDD3-201ENST00000216085 DISP1Q96F81 1524 aa32.62■■■□□ 2.81
RHBDD3-201ENST00000216085 KIAA0556O60303 1618 aa32.62■■■□□ 2.81
RHBDD3-201ENST00000216085 LOC105371045A0A1W2PR82 267 aa32.61■■■□□ 2.81
RHBDD3-201ENST00000216085 RANGAP1P46060 587 aaPredicted RBP32.61■■■□□ 2.81
RHBDD3-201ENST00000216085 EFCAB5A4FU69 1503 aa32.59■■■□□ 2.81
RHBDD3-201ENST00000216085 SAMD9Q5K651 1589 aa32.57■■■□□ 2.8
RHBDD3-201ENST00000216085 ARAP1Q96P48 1450 aa32.54■■■□□ 2.8
RHBDD3-201ENST00000216085 PTPRGP23470 1445 aa32.48■■■□□ 2.79
RHBDD3-201ENST00000216085 CLIP1P30622 1438 aa32.46■■■□□ 2.79
RHBDD3-201ENST00000216085 P3H3Q8IVL6 736 aa32.45■■■□□ 2.79
RHBDD3-201ENST00000216085 CYB5RLQ6IPT4 315 aa32.45■■■□□ 2.78
RHBDD3-201ENST00000216085 TTBK1Q5TCY1 1321 aaPredicted RBP32.43■■■□□ 2.78
RHBDD3-201ENST00000216085 CEP162Q5TB80 1403 aa32.42■■■□□ 2.78
RHBDD3-201ENST00000216085 ARHGAP35Q9NRY4 1499 aa32.42■■■□□ 2.78
RHBDD3-201ENST00000216085 FHOD3Q2V2M9 1422 aa32.39■■■□□ 2.78
RHBDD3-201ENST00000216085 FMN1Q68DA7 1419 aa32.3■■■□□ 2.76
RHBDD3-201ENST00000216085 UACAQ9BZF9 1416 aa32.28■■■□□ 2.76
RHBDD3-201ENST00000216085 ABCC2Q92887 1545 aa32.22■■■□□ 2.75
RHBDD3-201ENST00000216085 UHRF1BP1LA0JNW5 1464 aa32.22■■■□□ 2.75
RHBDD3-201ENST00000216085 PLB1Q6P1J6 1458 aa32.22■■■□□ 2.75
RHBDD3-201ENST00000216085 ABCA8O94911 1581 aa32.2■■■□□ 2.75
RHBDD3-201ENST00000216085 ADCY10Q96PN6 1610 aa32.19■■■□□ 2.74
RHBDD3-201ENST00000216085 RAPGEF6Q8TEU7 1601 aa32.18■■■□□ 2.74
RHBDD3-201ENST00000216085 NPM1P06748 294 aaKnown RBP eCLIP32.15■■■□□ 2.74
RHBDD3-201ENST00000216085 HECW1Q76N89 1606 aa32.07■■■□□ 2.73
RHBDD3-201ENST00000216085 CASKIN1Q8WXD9 1431 aa32.05■■■□□ 2.72
RHBDD3-201ENST00000216085 KDM5BQ9UGL1 1544 aa32.05■■■□□ 2.72
RHBDD3-201ENST00000216085 ATP1B4Q9UN42 357 aaPredicted RBP32.04■■■□□ 2.72
RHBDD3-201ENST00000216085 PCF11O94913 1555 aaKnown RBP32.03■■■□□ 2.72
RHBDD3-201ENST00000216085 NUP153P49790 1475 aaKnown RBP32.03■■■□□ 2.72
RHBDD3-201ENST00000216085 FYCO1Q9BQS8 1478 aa32.03■■■□□ 2.72
RHBDD3-201ENST00000216085 VPS8Q8N3P4 1428 aa32.01■■■□□ 2.72
RHBDD3-201ENST00000216085 ZCCHC11Q5TAX3 1644 aaKnown RBP31.98■■■□□ 2.71
RHBDD3-201ENST00000216085 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.95■■■□□ 2.71
RHBDD3-201ENST00000216085 HNRNPUL2Q1KMD3 747 aaKnown RBP31.95■■■□□ 2.71
RHBDD3-201ENST00000216085 ARID3CA6NKF2 412 aa31.94■■■□□ 2.7
RHBDD3-201ENST00000216085 MAPKBP1O60336 1514 aa31.94■■■□□ 2.7
RHBDD3-201ENST00000216085 ATP10BO94823 1461 aa31.93■■■□□ 2.7
RHBDD3-201ENST00000216085 CCDC18Q5T9S5 1454 aa31.92■■■□□ 2.7
RHBDD3-201ENST00000216085 EPRSP07814 1512 aaKnown RBP31.92■■■□□ 2.7
RHBDD3-201ENST00000216085 ASXL2Q76L83 1435 aa31.85■■■□□ 2.69
RHBDD3-201ENST00000216085 CDK13Q14004 1512 aaKnown RBP31.85■■■□□ 2.69
RHBDD3-201ENST00000216085 CDK11AQ9UQ88 783 aaPredicted RBP31.84■■■□□ 2.69
RHBDD3-201ENST00000216085 WDR7Q9Y4E6 1490 aa31.8■■■□□ 2.68
RHBDD3-201ENST00000216085 LRRIQ1Q96JM4 1722 aa31.79■■■□□ 2.68
RHBDD3-201ENST00000216085 PLEKHD1A6NEE1 506 aa31.79■■■□□ 2.68
RHBDD3-201ENST00000216085 APLP2Q06481 763 aa31.76■■■□□ 2.67
RHBDD3-201ENST00000216085 ABCC10Q5T3U5 1492 aa31.7■■■□□ 2.67
RHBDD3-201ENST00000216085 CFAP43Q8NDM7 1665 aa31.69■■■□□ 2.66
RHBDD3-201ENST00000216085 MAP3K1Q13233 1512 aa31.67■■■□□ 2.66
RHBDD3-201ENST00000216085 TRHP20396 242 aaPredicted RBP31.67■■■□□ 2.66
RHBDD3-201ENST00000216085 TIAM1Q13009 1591 aa31.67■■■□□ 2.66
RHBDD3-201ENST00000216085 DIP2BQ9P265 1576 aa31.66■■■□□ 2.66
RHBDD3-201ENST00000216085 TROQ12816 1431 aaPredicted RBP31.65■■■□□ 2.66
RHBDD3-201ENST00000216085 KCNH8Q96L42 1107 aa31.65■■■□□ 2.66
RHBDD3-201ENST00000216085 MTUS2Q5JR59 1369 aa31.63■■■□□ 2.65
RHBDD3-201ENST00000216085 FAM69CQ0P6D2 419 aa31.62■■■□□ 2.65
RHBDD3-201ENST00000216085 GLI2P10070 1586 aa31.6■■■□□ 2.65
RHBDD3-201ENST00000216085 EHBP1L1Q8N3D4 1523 aa31.59■■■□□ 2.65
RHBDD3-201ENST00000216085 KIF14Q15058 1648 aa31.58■■■□□ 2.65
RHBDD3-201ENST00000216085 KIF13AQ9H1H9 1805 aa31.56■■■□□ 2.64
RHBDD3-201ENST00000216085 MAGI3Q5TCQ9 1506 aa31.55■■■□□ 2.64
RHBDD3-201ENST00000216085 LRRC9Q6ZRR7 1453 aa31.52■■■□□ 2.64
RHBDD3-201ENST00000216085 ABCA9Q8IUA7 1624 aa31.51■■■□□ 2.63
RHBDD3-201ENST00000216085 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.47■■■□□ 2.63
RHBDD3-201ENST00000216085 MAP3K4Q9Y6R4 1608 aa31.46■■■□□ 2.63
RHBDD3-201ENST00000216085 CD109Q6YHK3 1445 aa31.45■■■□□ 2.62
RHBDD3-201ENST00000216085 SUPT6HQ7KZ85 1726 aaKnown RBP31.44■■■□□ 2.62
RHBDD3-201ENST00000216085 TTC37Q6PGP7 1564 aa31.42■■■□□ 2.62
RHBDD3-201ENST00000216085 KANK4Q5T7N3 995 aaPredicted RBP31.42■■■□□ 2.62
RHBDD3-201ENST00000216085 TEX14Q8IWB6 1497 aa31.37■■■□□ 2.61
RHBDD3-201ENST00000216085 MYO5CQ9NQX4 1742 aa31.36■■■□□ 2.61
RHBDD3-201ENST00000216085 NCOA2Q15596 1464 aa31.35■■■□□ 2.61
RHBDD3-201ENST00000216085 TSPOAP1O95153 1857 aa31.35■■■□□ 2.61
RHBDD3-201ENST00000216085 CCNB3Q8WWL7 1395 aa31.34■■■□□ 2.61
RHBDD3-201ENST00000216085 PLCH2O75038 1416 aa31.31■■■□□ 2.6
RHBDD3-201ENST00000216085 ARAP3Q8WWN8 1544 aa31.3■■■□□ 2.6
RHBDD3-201ENST00000216085 ITSN2Q9NZM3 1697 aa31.28■■■□□ 2.6
RHBDD3-201ENST00000216085 PREX2Q70Z35 1606 aa31.27■■■□□ 2.6
RHBDD3-201ENST00000216085 CFAP74Q9C0B2 1584 aa31.27■■■□□ 2.6
RHBDD3-201ENST00000216085 PPRC1Q5VV67 1664 aaKnown RBP31.27■■■□□ 2.6
RHBDD3-201ENST00000216085 ARHGAP5Q13017 1502 aa31.26■■■□□ 2.6
RHBDD3-201ENST00000216085 GPATCH8Q9UKJ3 1502 aaKnown RBP31.25■■■□□ 2.59
RHBDD3-201ENST00000216085 CDC42BPAQ5VT25 1732 aa31.24■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms