RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 NISCHQ9Y2I1 1504 aa47.88■■■■■ 5.26
RHBDD3-201ENST00000216085 CCDC180Q9P1Z9 1646 aa42.39■■■■■ 4.38
RHBDD3-201ENST00000216085 ABCC9O60706 1549 aa40.9■■■■■ 4.14
RHBDD3-201ENST00000216085 ZCCHC6Q5VYS8 1495 aaKnown RBP40.01■■■■■ 4
RHBDD3-201ENST00000216085 DCAF8L2P0C7V8 631 aa39.82■■■■□ 3.97
RHBDD3-201ENST00000216085 NACADO15069 1562 aa39.73■■■■□ 3.95
RHBDD3-201ENST00000216085 DCAF1Q9Y4B6 1507 aa39.68■■■■□ 3.94
RHBDD3-201ENST00000216085 MYO15BQ96JP2 1530 aa39.67■■■■□ 3.94
RHBDD3-201ENST00000216085 RB1CC1Q8TDY2 1594 aa39.65■■■■□ 3.94
RHBDD3-201ENST00000216085 SCRIBQ14160 1630 aa38.69■■■■□ 3.78
RHBDD3-201ENST00000216085 UNC13AQ9UPW8 1703 aa38.65■■■■□ 3.78
RHBDD3-201ENST00000216085 BICRAQ9NZM4 1560 aa38.31■■■■□ 3.72
RHBDD3-201ENST00000216085 PABPN1Q86U42 306 aaKnown RBP eCLIP38.28■■■■□ 3.72
RHBDD3-201ENST00000216085 SHROOM4Q9ULL8 1493 aa38.14■■■■□ 3.7
RHBDD3-201ENST00000216085 EIF4G1Q04637 1599 aaKnown RBP37.33■■■■□ 3.57
RHBDD3-201ENST00000216085 CECR2Q9BXF3 1484 aa37.17■■■■□ 3.54
RHBDD3-201ENST00000216085 BAZ1AQ9NRL2 1556 aaPredicted RBP37.13■■■■□ 3.54
RHBDD3-201ENST00000216085 SMARCA4P51532 1647 aa37.06■■■■□ 3.52
RHBDD3-201ENST00000216085 CC2D2AQ9P2K1 1620 aa37.02■■■■□ 3.52
RHBDD3-201ENST00000216085 DNAJC5BQ9UF47 199 aa36.91■■■■□ 3.5
RHBDD3-201ENST00000216085 MROH2BQ7Z745 1585 aa36.87■■■■□ 3.49
RHBDD3-201ENST00000216085 SMARCA2P51531 1590 aa36.76■■■■□ 3.47
RHBDD3-201ENST00000216085 ATAD2BQ9ULI0 1458 aa36.7■■■■□ 3.47
RHBDD3-201ENST00000216085 PEG3Q9GZU2 1588 aa36.69■■■■□ 3.46
RHBDD3-201ENST00000216085 RSF1Q96T23 1441 aaPredicted RBP36.67■■■■□ 3.46
RHBDD3-201ENST00000216085 NCAPD3P42695 1498 aa36.61■■■■□ 3.45
RHBDD3-201ENST00000216085 HMGXB3Q12766 1538 aa36.52■■■■□ 3.44
RHBDD3-201ENST00000216085 WIZO95785 1651 aa36.51■■■■□ 3.44
RHBDD3-201ENST00000216085 BAZ1BQ9UIG0 1483 aaKnown RBP36.49■■■■□ 3.43
RHBDD3-201ENST00000216085 TOP2AP11388 1531 aaKnown RBP36.22■■■■□ 3.39
RHBDD3-201ENST00000216085 SUPT5HO00267 1087 aaKnown RBP36.18■■■■□ 3.38
RHBDD3-201ENST00000216085 CCDC88BA6NC98 1476 aa35.75■■■■□ 3.31
RHBDD3-201ENST00000216085 LAMC3Q9Y6N6 1575 aa35.6■■■■□ 3.29
RHBDD3-201ENST00000216085 CADPSQ9ULU8 1353 aa35.59■■■■□ 3.29
RHBDD3-201ENST00000216085 NESP48681 1621 aa35.51■■■■□ 3.27
RHBDD3-201ENST00000216085 CFTRP13569 1480 aa35.48■■■■□ 3.27
RHBDD3-201ENST00000216085 PDS5BQ9NTI5 1447 aa35.37■■■■□ 3.25
RHBDD3-201ENST00000216085 ERCC6Q03468 1493 aa35.31■■■■□ 3.24
RHBDD3-201ENST00000216085 PRDM2Q13029 1718 aa35.29■■■■□ 3.24
RHBDD3-201ENST00000216085 FANCD2Q9BXW9 1451 aa35.19■■■■□ 3.22
RHBDD3-201ENST00000216085 KIF21AQ7Z4S6 1674 aa35.14■■■■□ 3.22
RHBDD3-201ENST00000216085 CEP164Q9UPV0 1460 aa35.13■■■■□ 3.21
RHBDD3-201ENST00000216085 MRC2Q9UBG0 1479 aa34.94■■■■□ 3.18
RHBDD3-201ENST00000216085 THOC2Q8NI27 1593 aaKnown RBP34.9■■■■□ 3.18
RHBDD3-201ENST00000216085 WDR62O43379 1518 aa34.8■■■■□ 3.16
RHBDD3-201ENST00000216085 ABCC8Q09428 1581 aa34.77■■■■□ 3.16
RHBDD3-201ENST00000216085 URB2Q14146 1524 aaKnown RBP34.75■■■■□ 3.15
RHBDD3-201ENST00000216085 CUX2O14529 1486 aa34.71■■■■□ 3.15
RHBDD3-201ENST00000216085 DNMBPQ6XZF7 1577 aa34.7■■■■□ 3.15
RHBDD3-201ENST00000216085 TOPBP1Q92547 1522 aa34.67■■■■□ 3.14
RHBDD3-201ENST00000216085 WRNQ14191 1432 aaPredicted RBP eCLIP34.62■■■■□ 3.13
RHBDD3-201ENST00000216085 CUX1P39880 1505 aa34.57■■■■□ 3.13
RHBDD3-201ENST00000216085 TOP2BQ02880 1626 aa34.47■■■■□ 3.11
RHBDD3-201ENST00000216085 BIVM-ERCC5R4GMW8 1640 aa34.45■■■■□ 3.1
RHBDD3-201ENST00000216085 SYNJ1O43426 1573 aa34.44■■■■□ 3.1
RHBDD3-201ENST00000216085 FGD5Q6ZNL6 1462 aa34.41■■■■□ 3.1
RHBDD3-201ENST00000216085 POLA1P09884 1462 aaPredicted RBP34.4■■■■□ 3.1
RHBDD3-201ENST00000216085 IFT140Q96RY7 1462 aa34.36■■■■□ 3.09
RHBDD3-201ENST00000216085 SOGA1O94964 1423 aa34.29■■■■□ 3.08
RHBDD3-201ENST00000216085 RAD54L2Q9Y4B4 1467 aa34.22■■■■□ 3.07
RHBDD3-201ENST00000216085 TARBP1Q13395 1621 aaKnown RBP34.22■■■■□ 3.07
RHBDD3-201ENST00000216085 TRIM41Q8WV44 630 aa34.2■■■■□ 3.07
RHBDD3-201ENST00000216085 ABCA10Q8WWZ4 1543 aa34.12■■■■□ 3.05
RHBDD3-201ENST00000216085 WDR97A6NE52 1622 aa34.09■■■■□ 3.05
RHBDD3-201ENST00000216085 ZNF608Q9ULD9 1512 aaPredicted RBP34.07■■■■□ 3.04
RHBDD3-201ENST00000216085 CHIC1Q5VXU3 224 aa34.03■■■■□ 3.04
RHBDD3-201ENST00000216085 EIF4G3O43432 1585 aaKnown RBP34.02■■■■□ 3.04
RHBDD3-201ENST00000216085 TDRD9Q8NDG6 1382 aaKnown RBP34■■■■□ 3.03
RHBDD3-201ENST00000216085 AQRO60306 1485 aaKnown RBP eCLIP33.96■■■■□ 3.031e-7■■■■■ 37.9
RHBDD3-201ENST00000216085 GAPVD1Q14C86 1478 aa33.92■■■■□ 3.02
RHBDD3-201ENST00000216085 ABCA5Q8WWZ7 1642 aa33.92■■■■□ 3.02
RHBDD3-201ENST00000216085 KIF27Q86VH2 1401 aa33.89■■■■□ 3.02
RHBDD3-201ENST00000216085 GRIN2BQ13224 1484 aa33.85■■■■□ 3.01
RHBDD3-201ENST00000216085 PBRM1Q86U86 1689 aa33.8■■■■□ 3
RHBDD3-201ENST00000216085 ERICH3Q5RHP9 1530 aa33.75■■■□□ 2.99
RHBDD3-201ENST00000216085 MAGI1Q96QZ7 1491 aaPredicted RBP33.72■■■□□ 2.99
RHBDD3-201ENST00000216085 SNAPC4Q5SXM2 1469 aa33.71■■■□□ 2.99
RHBDD3-201ENST00000216085 EEA1Q15075 1411 aa33.63■■■□□ 2.97
RHBDD3-201ENST00000216085 RUSC2Q8N2Y8 1516 aa33.6■■■□□ 2.97
RHBDD3-201ENST00000216085 IGF1RP08069 1367 aa33.58■■■□□ 2.97
RHBDD3-201ENST00000216085 ADAMTS12P58397 1594 aa33.58■■■□□ 2.97
RHBDD3-201ENST00000216085 SYNJ2O15056 1496 aa33.57■■■□□ 2.96
RHBDD3-201ENST00000216085 CUL7Q14999 1698 aa33.57■■■□□ 2.96
RHBDD3-201ENST00000216085 FHAD1B1AJZ9 1412 aa33.56■■■□□ 2.96
RHBDD3-201ENST00000216085 CHMP7Q8WUX9 453 aaPredicted RBP33.53■■■□□ 2.96
RHBDD3-201ENST00000216085 FBLN2P98095 1184 aa33.52■■■□□ 2.96
RHBDD3-201ENST00000216085 CHD1O14646 1710 aa33.46■■■□□ 2.95
RHBDD3-201ENST00000216085 CARMIL1Q5VZK9 1371 aa33.45■■■□□ 2.95
RHBDD3-201ENST00000216085 CSRNP3Q8WYN3 585 aa33.43■■■□□ 2.94
RHBDD3-201ENST00000216085 FAM9AQ8IZU1 332 aaPredicted RBP33.42■■■□□ 2.94
RHBDD3-201ENST00000216085 GRIN2AQ12879 1464 aa33.41■■■□□ 2.94
RHBDD3-201ENST00000216085 OSCARQ8IYS5 282 aa33.36■■■□□ 2.93
RHBDD3-201ENST00000216085 RAPGEF2Q9Y4G8 1499 aa33.33■■■□□ 2.93
RHBDD3-201ENST00000216085 PRXQ9BXM0 1461 aa33.31■■■□□ 2.92
RHBDD3-201ENST00000216085 NUP160Q12769 1436 aa33.21■■■□□ 2.91
RHBDD3-201ENST00000216085 KIF21BO75037 1637 aa33.18■■■□□ 2.9
RHBDD3-201ENST00000216085 CEP170Q5SW79 1584 aa33.17■■■□□ 2.9
RHBDD3-201ENST00000216085 CLASP1Q7Z460 1538 aa33.11■■■□□ 2.89
RHBDD3-201ENST00000216085 GOLGA3Q08378 1498 aa33.06■■■□□ 2.88
RHBDD3-201ENST00000216085 KIAA0586Q9BVV6 1533 aa33.05■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms